KEGG   Brachyistius frenatus (kelp perch): 138616184
Entry
138616184         CDS       T10614                                 
Symbol
tdp1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1 isoform X1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
bfre  Brachyistius frenatus (kelp perch)
Pathway
bfre03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bfre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    138616184 (tdp1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bfre03400]
    138616184 (tdp1)
DNA repair and recombination proteins [BR:bfre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     138616184 (tdp1)
SSDB
Motif
Pfam: Tyr-DNA_phospho
Other DBs
NCBI-GeneID: 138616184
NCBI-ProteinID: XP_069546413
LinkDB
Position
Unknown
AA seq 616 aa
MSQDSQHGKWTISSSDDDDEGLPPSGTTTSRRPAESHHSSRRSASPGPVPAPAEVKPEPA
KPQVSSLAVGSEARQSAAMNQINPGKYETSPSLAGKRRKSASDESGWALSDSDEDDRDVK
KKSVSDLPKRAPPSPEAKKVKVVNERPPSPHGRLYYIDEPDDFFETCAPRLNDTYRFYLN
KVTGLDRKYNSGALHIRDILSPLFGTLKESVQFNYCFDIAWMVQQYPPEFRDRPVLIVHG
DKREAKARLVQQAQPFPHVRFCQAKLDIAFGTHHTKMMLLWYEEGFRVVILTSNLIRADW
YQKSQGMWMSPLFPRLPKGSSASAGESPTFFKRDLLDYLASYRAQELEEWIQQIKEHDLS
ETRVYLVGSSPGRYVGPDMERWGHLRMRKLLYEHTDPVPDEERWPVIGQFSSIGSMGLDK
TKWLAAEFQRTLTTLGRSSLRSDAPVHLLYPSVEDVRTSLEGYPAGGSLPYSIQTAQKQL
WLHSYFHRWKANTTGRSHAMPHIKTYMRASPDFTQLAWFLVTSANLSKAAWGALEKNNTQ
VMVRSYELGVLYVPSAFNMKTFPVDKNPFPVSSTSSGFPVPFDLPPTCYSAQDQPWIWNI
PYNQAPDTHGNIWVPS
NT seq 1851 nt   +upstreamnt  +downstreamnt
atgtctcaggacagtcaacacggcaagtggaccatctccagcagtgatgacgatgatgag
ggtcttcctccttccgggactactacatcccgtcgacctgctgaatcccatcacagctcc
cgtaggtctgcttctccaggaccagtaccagcgcctgcggaggtgaaaccagaaccagcc
aaacctcaggtgtcctcactggccgtcggctcagaggcgagacagtcagccgcaatgaac
cagataaacccaggaaagtatgaaaccagtccttcattagctggaaagcggagaaaatct
gcatccgatgagtcgggctgggctctgtcagatagtgatgaagatgatagagatgtgaag
aagaagagtgtcagtgacttaccaaagagggcgcctcccagccccgaagcaaagaaagtg
aaggtggtgaacgagcgtcctccgagtccccacggccgactctactacatcgacgagccg
gacgacttctttgaaacctgtgctccccgtctgaatgacacctacaggttttacctcaac
aaagtcacaggcctggacaggaagtacaacagcggagcgctgcacatcagagacattctc
tctccgttatttgggaccctgaaggaatctgttcagtttaactactgctttgatatcgcc
tggatggttcagcagtacccaccagagttcagagatcgtccggttctgatcgtccacgga
gataagagggaggccaaggcccgactggtgcagcaggctcagccctttccacatgttcgc
ttctgccaggccaagctggacattgcttttggaactcaccacacgaagatgatgttgctg
tggtatgaggaaggcttccgagtcgtcatcctgacctccaacctcatcagagctgactgg
taccagaaatcacaggggatgtggatgagccctctgtttccacggttaccaaagggaagt
agtgcaagcgcaggtgagtcgcccaccttctttaagagggacctgctggactacctggcg
tcataccgggcacaagaactcgaagagtggatccaacaaatcaaagagcacgacctgtca
gagacgagggtgtatttggtcggctcgagtccggggaggtatgtcggtccagacatggag
cgctggggccacctgaggatgaggaagctgctgtatgagcacacagatcctgtccccgac
gaggaaaggtggcctgtgattggccagttctccagcatcggctccatgggactggataag
accaagtggttggcggctgagtttcagcgcaccctgaccacgctgggaagatcctctcta
cgctcagacgcccccgtgcacttgctgtatccctcagtcgaagatgtgaggacgagttta
gaaggttacccagctggaggctctcttccttacagcatccagacagctcagaaacagctc
tggctccactcgtacttccaccgctggaaggcgaatacgactgggaggagtcacgccatg
ccacatataaaaacatacatgagggcatcgccagatttcactcaactcgcctggttcctc
gtcacaagtgccaatctgtccaaggcagcgtggggtgctctggagaagaacaacactcag
gtgatggtgcgttcgtacgagctgggagtcctctacgtgccgtccgcctttaacatgaaa
accttccccgttgacaaaaatccatttcctgtctcttcaacctcctctggtttcccggtg
ccctttgacctccctcctacatgctactctgctcaagatcagccgtggatctggaacatt
ccttacaaccaggctcccgacacgcacggcaacatctgggttccctcctaa

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