Brachyistius frenatus (kelp perch): 138618916
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Entry
138618916 CDS
T10614
Symbol
rorca
Name
(RefSeq) RAR-related orphan receptor C a
KO
K08533
RAR-related orphan receptor beta
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bfre03000
]
138618916 (rorca)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
bfre03310
]
138618916 (rorca)
Transcription factors [BR:
bfre03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
138618916 (rorca)
Nuclear receptors [BR:
bfre03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
138618916 (rorca)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
138618916
NCBI-ProteinID:
XP_069551110
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All DBs
Position
Unknown
AA seq
474 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSQECAAVGARDENSDMAD
HGRAYRRGSSATLSDLDDITTLPEGLLFDLPLTPEDAGGEYCNLDMLGGSAGSSSSSQSS
PEQTNLDFVDGNHSIKHEYQLLHDSGLFSHAILNPLPEGCSPLEIERITQSVVKSHIETS
QYSTEELKRMAWTLYNPEETRSYQTMSAEVMWQQCAIHITNAIQYVVEFAKHISGFMDLC
QNDQIILLKAGCMDVLLIRMCRAYNPINNTLLFDGKFAAAQLFKALGCDDLVSAVFDLAK
SLSRVQMSEEEMALFSAAVLLSPDRPWLTDVQRIQKLQEKVYVALQRCLQKEGASDEKLA
KMVSKLPIMRSICNLHIDKLDFFRLVHPETAYTFPPLYREVFGSEITFPDSTEG
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcaaatagaggtaattccctgtaaaatctgtggggacaaatcatcagggatt
cactatggtgtcatcacctgtgaaggctgcaagggtttctttcgacgtagccagcagaac
aacgccatgtactcctgctctagacagaggaactgcctaattgaccggaccaatcgcaat
cgttgtcagcactgcaggctgcagaagtgtctcgctctgggcatgagccgtgatgccgtc
aagttcggtagaatgtccaaaaagcagcgcgacagcctgtacgcagaggtgcagaaacac
cagcagtctcaggagtgtgcagcagtcggcgcccgcgacgagaatagtgacatggccgac
cacggccgcgcctacaggagaggctccagcgccacgctcagcgatctggacgacattacc
actttgccggagggcctgctttttgacctcccgctgaccccagaggatgcaggtggagag
tactgtaacctggacatgctgggcggaagtgcaggaagcagctcgtcctctcagagctcg
ccggagcagaccaacttagactttgtcgacggcaatcacagcatcaagcacgagtaccag
ttgttgcacgattctggactcttctcccacgctatactcaacccgctacccgagggctgc
tccccgcttgagatagagcgtataacccagagtgtggtgaagtcccatattgagacaagc
cagtacagcacagaggagctgaagagaatggcgtggaccttatacaacccagaggagaca
cgctcataccagaccatgtcagctgaggtgatgtggcaacaatgtgccattcacatcact
aacgcaatccagtatgtggtggagtttgccaagcacatctctggcttcatggacctctgt
cagaacgatcagattatcctcctcaaagcaggctgcatggatgttcttctgatccgtatg
tgtcgggcctacaaccccatcaacaacacgttgctctttgatggaaagtttgccgctgct
cagcttttcaaagctctcggctgtgatgacctcgtgagcgcggtgttcgacttagctaaa
agcctgagccgtgtccagatgtccgaggaagagatggctctctttagtgcagctgtgctg
ctctcaccagaccgaccctggctgacagatgtccagaggatccagaagttgcaggaaaag
gtttatgtggctctgcagcgttgtctacaaaaagaaggagcatcagacgagaaactagcc
aagatggtgtccaagcttcccatcatgaggtccatttgcaacctccacattgacaaactg
gactttttccgtttggttcaccctgaaacggcatacacctttcctcctctgtatagggag
gtttttggcagtgaaatcaccttcccagactccacagagggttag
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