Brachyistius frenatus (kelp perch): 138623161
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Entry
138623161 CDS
T10614
Symbol
scn1laa
Name
(RefSeq) sodium channel, voltage-gated, type I-like, alpha
KO
K04834
voltage-gated sodium channel type II alpha
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bfre04040
]
138623161 (scn1laa)
Ion channels [BR:
bfre04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
138623161 (scn1laa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
Lustrin_cystein
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
138623161
NCBI-ProteinID:
XP_069558597
LinkDB
All DBs
Position
Unknown
AA seq
1988 aa
AA seq
DB search
MAELLVPPGPDSFHRFSRESLKAIESRIAEEKAKKPKGEKTKGNDENELKPSRDLEAGKP
LPLLYGDTPKGLASIPLEDLDPYYYNQKTFVVLNKGKYIFRFNAAPALYLLSPFNLLRRI
SIRILVHSLFSIVIMCTILANCVLMTQSSQPDWAKNVEYLFTAIYTFESVVKILARGFCI
GKFTFLRDPWNWLDFTVIVMAYVTEVVPGFNLSALRTFRVLRAFKAISVIPGLKTIVGAL
FQSVKKLADVMILTVFCLSIFALVGLQLFMGQLTQKCVAWPLNKSSAEGMNQGVFNYSDY
VHDKRNYYYLPNTRDPLLCGNNSEAGQCPEGYTCMKIGTNPDYNYTSFDSFGWAFLSLFR
LMTQDYWERLYQQILRACGKPYMLFFVLVIFLGSFYLINLILAVVAMAYEEQCQATIKEA
REKEEKFQAMLEQLKRQQEDAQAAATAAEGGEASDKGGGTESSSGASKLSSKSAKERRNR
RKKRKGEEGKEAEEKFPKTESQNSIQKTRCRFSGEANMLNYDTKCSSVHQSFLSFRGPLF
SSRRNSKTSVFSFRSQAQDVGSENEFADDENSIFEDNLSWRGSFFFPQRCDRRSSSVSQR
SFLSHLLRQPNGIRQSSVDCNGVVSLVGGNSLPSSPVGLLLPKVTVDMASTGDNADTTDT
EHRQAGGGTNQEFMDFLEGPEARQRALSVASVITSTMEELEESRQKCPLCWYKFAHTFLI
WECSPTWLKIKKVVKQIVMDPFTDLTITICIVVNTLFMAMEHYPMTLGFNRMLNAGNQVF
TGIFTAEMVLKIIAMDPYFYFQEGWNIFDAIIVSLSLLELCLERIGMSVLRSFRLLRVFK
LAKSWPTLNTLIKIIGNSVGALGNLTLVLAIVVFIFAVVGMQLFGKKYRDCVCKISEDCV
LPRWHMSDFFHSFLIVFRVLCGEWIETMWDCMEVAGIHKCIILYMMVLVIGNLVVLNLFL
ALLLSSFSADNLAATEVDQEMNNLQVALGRIQNGMAVIISLLRSGCRCVCLRDKKKRKGE
DKSLDELNKPLGLNGVPNHTIKDFPKSGNGDVTGVDKNGDKYIVSSRSDDSIMSFINNPS
LTVTVPIAVGESDFENLNTEDFSSVSSDAAGCHVIVDDDGQLSSSEGSTVDGGLPGEVGD
SVDFESEEATDPDACFPTVCVQKFQCCQVNVDVGCWKVWWTLRKTCFRIVEHNWFESFII
FMILLSSGALAFEDIYIEKRKTIKTILEFADKMFTYIFILEMLLKWVAYGFAKYFTNAWC
WLDFLIVDVSLVSLAANALGFNELGAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIP
SIFNVLLVCLIFWLIFSIMGVTLFAGKFGKCVNLDTNQPFSPSEVKNMSKCNMMEKARWK
NVKVNFDNVGMGYLALLQVATFKGWTDIMYAAVDSPGNLEEQPSYEINMKMYLYFVIFII
FGAFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPSN
KIQGYIFDFTTKQAFDIVIMVLITLNMIAMMVETADQSEEKENTLNNINVVFIAIFSGEC
LLKIIALRQYFFTNGWNVFDLIVVILSLMGMWLSEVIEQYFVSPTLLRVVRLARIGRVLR
LIKSAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSSFAFVKREKGIDDLFNFE
TFGNSMICLFQITTSAGWDGLLDPILNNDDLDCSRTMSHPGSNISGNCGNPTVGIAFFVS
YIIICFLIVVNMYIAVILENFSVATEESADPLSEDDFEMFYEVWERFDPHATQFIEYKKL
SEFADALEPPLCIAMPNKIELIAMDLPMVSGERIHCLDILFAFTKRVLDEGGEMDILRGQ
MEERFMASNPSKVSYEPITTTLRRKQEDTSAVVIQRAFRRYVTTSREDAIGPSDTSDVDI
EKDEQHLDKEDLVTDRLKDITSADKSELTPSAASQPSCNSVTTNGKNKYEKDKSEKEVVS
KDVSEQDK
NT seq
5967 nt
NT seq
+upstream
nt +downstream
nt
atggcagagctgcttgtaccaccaggtccagacagcttccaccgatttagtcgtgagtcc
ctcaaagccatcgagagtcggattgcggaggaaaaagccaagaagcccaaaggggagaag
acaaaaggcaatgatgagaatgagctcaaacccagccgcgacctggaggcgggcaaaccc
ctccctcttctgtatggggacactcctaaaggcctggcgtcgatcccgctggaggacctg
gatccctactactataatcagaaaactttcgtagtactgaacaaaggaaagtacattttt
cgcttcaatgccgctcctgccttgtacctcctgagccccttcaaccttcttagaagaata
tcaattaggattctggtacactcattgttcagcatcgtgatcatgtgtactatcctcgcc
aactgtgtacttatgacccagtcttcacagcctgactgggcaaagaatgtcgagtaccta
tttactgcaatctataccttcgaatccgttgttaaaattctagcccggggcttctgtata
gggaagttcacatttctaagagatccctggaactggctggacttcactgtcattgtcatg
gcgtatgtcacagaggttgtacctggtttcaatttgtcagctcttcgcacattcagagtg
ttaagagctttcaaagcaatttcagttattccaggcctgaagaccattgttggtgcgttg
ttccagtcagtgaagaagctcgctgatgtgatgatcctcactgtcttctgcttgagcatc
tttgccctcgtagggttacaactgtttatgggccagttaacgcaaaagtgcgtcgcgtgg
ccactaaataaaagttcagcagaaggaatgaaccagggggttttcaattattctgactac
gtacacgataagcgtaattattattacctgccaaacacacgtgacccgttgctttgtgga
aacaacagtgaagctgggcagtgtccggaggggtacacatgcatgaaaataggaacgaat
ccagactacaattacaccagctttgactcgtttggttgggccttcctttctctgttcaga
ctgatgacacaggattactgggaaagactttaccagcagattctgcgggcatgtgggaag
ccctacatgctcttttttgtgctggtgatattcctcggttccttctacctgatcaacctg
atcttggctgtagtcgctatggcctatgaggagcagtgccaggctaccataaaggaggct
cgggagaaggaggagaagtttcaggccatgcttgagcagctgaaacggcagcaagaggac
gctcaggcagcagcgactgcagcggagggtggggaggccagcgacaaaggtggtggcacg
gagagttcctcgggcgcgtccaagctcagctccaaaagtgccaaagagagacgcaacagg
cgcaaaaaaagaaagggggaagagggaaaagaagctgaggagaagtttcctaaaaccgag
tcgcagaacagtatccagaagactcgctgtcgcttctccggtgaggcaaacatgctcaac
tacgacacgaagtgctcgtccgtacatcagtcctttctgagttttcgtggacccctgttc
tcatccagacggaacagcaagaccagcgttttcagtttccgaagccaagcgcaggacgtg
ggctcagaaaacgagtttgcagatgatgagaacagcattttcgaggacaacctgagttgg
aggggctccttcttttttcctcagaggtgtgatcgacgcagcagcagtgtgagccagcgc
agcttcttgtcacatctcctacgtcaaccaaatgggatcagacagagctctgtagattgc
aatggggttgtgtctctggtgggtgggaattcactcccatcatcacctgttgggctcctt
ctgcctaaagtgacggtagatatggcctccactggagacaatgctgacactactgacaca
gagcacagacaggccggcgggggaaccaaccaggagtttatggacttcctcgagggtcca
gaggcaagacaacgggctcttagtgtggctagtgtcataaccagcacaatggaggagctt
gaagaatcgaggcagaagtgtcctctttgctggtacaagtttgctcacaccttcctcatc
tgggaatgttctccaacttggctgaaaatcaagaaagtggtgaaacaaattgtaatggac
ccattcactgacctaactatcaccatctgcattgtagtcaacacattgtttatggccatg
gagcattatccaatgacccttggtttcaaccgcatgcttaatgcgggcaatcaggtattc
acgggcatcttcacagctgaaatggtcctgaagatcattgctatggacccttacttttac
ttccaggagggatggaatatttttgatgcaatcattgtcagtttaagcttgttggagctt
tgtttggaaagaattggcatgtctgttctgagatctttcagactgctgagagtattcaag
ttggctaaatcttggcccactcttaacacactgatcaaaataattggtaattcagtgggg
gctttggggaacctgaccctggtactggccattgttgtcttcatctttgctgtggtcggc
atgcagctgtttggaaaaaaatacagggactgtgtgtgtaaaatctctgaagactgcgtt
ctgcctcgctggcacatgagtgacttcttccattcattcctcattgtgttccgagtgctt
tgtggagagtggatagagaccatgtgggactgtatggaggtggctgggattcacaagtgc
atcattctgtacatgatggtcttggtcattggaaacctcgtggtgctgaacctgttcttg
gccctgctgctgagttcattcagtgccgacaacctggcagcaacagaggtggaccaagag
atgaacaatttgcaagttgctcttggacggattcagaacggcatggctgtcatcatctct
ctgcttcgaagcggctgcagatgtgtttgtctcagggataaaaagaaaagaaagggcgag
gacaaatctctagatgagctcaacaaacctttagggctgaatggtgtccccaaccacact
atcaaagactttcctaagagcggcaatggggatgtgactggagtggacaaaaatggagac
aagtacatagtcagcagcaggagtgacgattcaataatgtctttcataaacaatcccagc
ctgacagttactgttcccatcgccgtgggagagtctgactttgaaaacctcaacacggag
gacttcagcagtgtttcatccgatgcagcaggctgccatgtgattgtagatgacgatggg
cagctgagctcgtctgagggcagcacagtggatggcggactacccggagaggttggagac
tctgtcgactttgaatcagaagaagctacggatcctgacgcctgctttcctaccgtctgt
gtgcaaaagttccagtgttgtcaagtaaacgtggatgtgggctgttggaaggtgtggtgg
acattaaggaaaacctgtttccggatagtggagcacaattggtttgagagcttcatcatc
ttcatgatcctgctcagcagtggagcgcttgcatttgaagacatctacattgagaagagg
aagaccattaaaaccatactggagtttgcagacaaaatgttcacctacatcttcattctg
gagatgttactgaaatgggtcgcgtatggattcgccaagtatttcacaaatgcctggtgc
tggttggacttcctaattgttgatgtctcactggtcagtttggcagccaacgccttaggg
tttaatgaacttggtgccatcaagtctctgagaactctgcgagctctgaggcccctgaga
gccttgtcacgattcgagggcatgagggtggttgtcaacgccctgctgggagccattcct
tctatcttcaatgtgctgctggtatgtctcatcttctggctcatcttcagcatcatggga
gtcaccttgttcgcggggaagttcggcaagtgtgtcaacttagacacaaatcagcctttc
tccccgtcagaggtgaaaaacatgagtaaatgcaatatgatggagaaggctcgctggaag
aatgtcaaagtcaactttgacaatgttggcatgggttaccttgctctgctgcaagtggct
acatttaaaggctggacggacatcatgtatgctgctgtggactctccaggcaatctagaa
gaacaaccatcttatgagatcaacatgaagatgtacctatactttgttattttcatcata
tttggagccttcttcactctcaatctctttattggtgtcattatcgacaatttcaatcag
caaaagaaaaagtttggaggtcaagacatctttatgactgaagaacagaagaaatactac
aatgccatgaaaaagttggggtcaaagaaaccacaaaaacctattccgagaccatcaaac
aagattcaaggatacatctttgacttcaccacaaaacaagcatttgacattgtaattatg
gttctaataacgcttaatatgatagccatgatggtggaaactgcagaccagtcagaggag
aaggagaacactctcaataatatcaatgtagtattcattgccatcttctctggagagtgt
ctgttgaagattatcgcccttcgccagtactttttcacaaatggatggaatgtgtttgat
ttgatcgtagtcattctgtcactcatgggtatgtggctctcagaggtgatagaacagtat
tttgtttcaccaaccttgctcagagtcgtccgattggctcggattggccgtgtcctccgc
cttattaaaagtgcgaaaggaatccgcacgctcttgtttgccttgatgatgtcacttcct
gccttgttcaacattggtctcttgctcttcttggtgatgtttatctatgctatctttggc
atgtctagctttgcttttgtcaagagggaaaaaggtattgatgaccttttcaattttgag
acatttggcaacagcatgatctgtttgttccagatcaccacctcagcagggtgggatggc
ctgctggaccccatcctcaacaatgatgatcttgattgtagccgtaccatgtcgcatcct
ggcagtaatatttctggaaactgtggaaatcctactgtgggaattgccttctttgtgagc
tacatcatcatctgtttccttattgtggtgaatatgtacatcgcagtcatcctggaaaac
tttagtgtggcgactgaggagagtgccgacccattaagtgaggatgattttgaaatgttt
tacgaggtctgggaaagatttgatcctcatgcaacacaattcatagagtacaaaaaactt
tcagaatttgcagatgctctggagccacctttatgcatagccatgcctaacaagatcgaa
ctgatcgctatggatctacccatggtgagtggggaacgcattcactgcttagacatcctg
tttgcattcacaaaacgagttctagacgagggtggggagatggacattctcagggggcag
atggaggagcgcttcatggcctcaaatccttccaaagtgtcctacgaacccatcactacc
accctccgccgcaaacaggaggacacatcagctgttgtcatccagagagcattcagacgg
tatgtaacaacaagtcgagaagacgccattggaccctctgacacgtccgatgttgacatt
gagaaggatgaacagcaccttgacaaagaagaccttgtcactgacagacttaaagacatt
actagtgctgataaaagtgagctgacaccctcggcagcttctcaaccttcatgtaatagt
gtgacaacaaatggaaaaaacaaatatgaaaaagacaaaagtgaaaaggaggttgtgagt
aaagatgtcagcgagcaagataaatga
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integrated database retrieval system
