Brachyistius frenatus (kelp perch): 138624834
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Entry
138624834 CDS
T10614
Name
(RefSeq) cyclic nucleotide-gated channel beta-1-like
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
138624834
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bfre04040
]
138624834
Ion channels [BR:
bfre04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
138624834
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
138624834
NCBI-ProteinID:
XP_069561477
LinkDB
All DBs
Position
Unknown
AA seq
1524 aa
AA seq
DB search
MYPTGKSPQLKNTDEASEDGQNQTGVLGWLSNGFVSALPQPSNSLQNNSDAGHGENGERS
GVIGWVTQGLTNVLPQPDDKYKETKDTNEEHTEVYEVETMPDFDPLPHIPVVEMVSDEEA
SEADVPAQFPPNMVNWIKHMIPHPLILPPGAIPGEQATKSSSSSLDKILSPPESLSGISL
DTDSKASGVVGWFVSGLGLKMPQPAIQPKDEAESATEVLQKVSSKLRPDMVLEDVESDNE
DQQKERPKAAVPAASPNPPPAAATRPSQSNSVQPEKSSNSNTEPQRAESVTKTSLEDAET
QTGRWTPFIESIKKEAEGVALATMEERLLQERIDMTRMAEEVARHTAEMAIRQLAGEGQS
IKLSLGSQELLEEPEVELQTPQEEESEVEPREENEDCAEEEEEEEEAETEEPTARETDSN
EEPEPQQTSPSPPPSPEPEDNAEPEPETDAQEGSPDTEPVTKQPQKAEDGDQAADADKAP
EKEEEAAGEGCDVPVSCDALKSCLMRVPHASEYLGNISAFLKENGISPPKLPSMPKLPTQ
LSDVTSYLPSLPPELRQEFSQIRLTQVPRNIIQTLTELWPKNEEGLVGPDLSSLSQSFSS
IPQKLSEFPGRTQQYFLNVRNRLNSLMPQDALRSRSPSPSSPNGSALELPNVPSYSRLPP
IVSPPSKQLSCLSRQLSGLSNPAFFIEDDSDISPIRPAESSSLSLRPAVNVEDVDSVHER
RGAGGAGGAGGGGGGGGGEEQSNIPKILTPQDPKLTTLTVPVTPSVGRQSKGDKDSGRNR
RTIWRKIRRLRSQSEDDDDEGSIPVRAWPSQSSLHSTDDILKERPASSASQTSTVVNERL
QELVKMFKERTEKAKEKLIEPDSSDEDSIVPSPPQPPAPQPAPRGGAPDAEEKENQAGPS
GGGGGGGGGGEEGVGEESGSEEEQSSRCCKVKTLRCIRACTHFRFPASIDPFTNLMYVLW
LFLVCLAWNWNVWFIPVRWAFPYQTPDNICYWLVTDYVCDLIYILDITIFQPRLQFVCSG
DIVCDKKEMRKNYMKTKRFKFDVASLVPLELFYFKTGINPLLRLPRLLKIKSFYEFNERL
EAILTKAYIYRVIRTTTYLLYCLHCNACLYYWGSAFTGLGSTKWVYNGEGNSYIRCYYFA
VKTLITIGGLPDPTTLFEIIFQLINYFVGVFVFSIMIGQMRDVVGAATAGQTYYRTCMDN
TIKYMSSYRIPKDVQNRVKTWYNYTWQSQGMLDEQELLTQLPDKMRLDIAIDVNYSIVSK
VPLFQGCDRQMIFDMLKSLRSVVYLPGDYVCKTGEVGREMYIIKAGEVQVVGGPEGRTVF
VTLRAGSVFGEISLLSVGGGNRRTANVIAHGFANLFILEKKDLNEILVHYPESKKLLRKK
ARKMLTKGKKPEPKEDTKEAPRVPAAPVRPETPKLLRAALEMTEKYSGLKAALTKVKEKT
NKSSISLQPSISSSLPPPSPASSSGPDRDVDTPSPVYAGPATYRSASRAMPQSSSQCHDD
AIEQEGDSEGEGDEGGKRKEKKLR
NT seq
4575 nt
NT seq
+upstream
nt +downstream
nt
atgtatcccacagggaagagtccccaactgaaaaacacagatgaggcttcagaggacggt
cagaaccagacgggagtattaggctggctgtccaatggcttcgtcagcgctctgccgcag
ccgtccaactcccttcaaaacaactctgatgccgggcatggagagaatggagaaaggtct
ggagtgattggctgggtcactcagggtctgaccaacgtgctgcctcagcctgatgataag
tacaaagagaccaaggacaccaatgaggaacacacagaggtgtatgaagttgaaacaatg
ccagattttgatcctcttccacacatccctgtggtggagatggtgtcagatgaagaggcg
tcggaagctgatgtgcccgctcagtttcctcccaacatggtgaactggataaagcacatg
atccctcatccgttgatactgccccctggtgccattcccggagaacaagccaccaagtcc
tctagctcctctctggacaaaattctgtctccacctgaatctctcagtggcatctcactg
gatactgacagcaaggcctctggtgttgttggctggtttgtgtcaggactgggcttgaag
atgcctcagcctgctattcaacctaaagatgaggctgagagtgcaactgaagtcctacag
aaagtgtcatccaaactcagacctgacatggtgctggaggacgtggagtcagacaacgag
gatcagcagaaggaacgtcctaaagctgccgtcccggctgcgtctccgaacccgccacca
gcggcggcgacgcggccgtcgcagtccaactcggtacagccggagaagtccagcaactcc
aacactgagccacaacgggcagagagtgtgacaaaaacctctctggaggatgccgagact
cagacgggccgctggacgccgtttattgaaagcatcaagaaggaggctgagggtgtggcc
ttggctaccatggaggaacgcctgctgcaggagaggattgacatgactcgtatggctgag
gaagtggcccggcacacagctgagatggcgatcagacagctggccggcgagggacagtcc
atcaaactctcactggggagtcaggaactgctggaagagcccgaagtcgaacttcaaacg
ccacaagaagaggagagcgaggtggagcccagagaagagaacgaggactgtgctgaggag
gaggaggaggaggaagaagcggagacagaggaacctaccgccagggaaacagactcaaac
gaggagccagaaccacagcagacctcaccctctccacctccaagtcctgaaccggaggat
aacgctgaaccagaaccagagaccgacgcccaggaaggcagtccagacaccgagcctgta
accaagcagccacagaaagcagaagacggcgatcaagccgctgacgctgacaaagctcct
gaaaaggaggaggaagctgcgggggaagggtgtgatgttccagtcagctgcgatgcactt
aagagctgcctgatgcgcgttcctcacgcctccgagtacctcggcaacatcagcgcgttc
ttgaaagagaacggcatctcccctcccaaattaccttccatgcctaagctacccacccag
ctctctgacgttaccagctacttaccctcgcttccccccgagttacgccaagagttctcc
cagatccggctcacgcaggtcccccgaaacatcatccagactctgactgagctttggccc
aaaaacgaggagggcttagtgggccccgatctgtccagtctgtcccagagcttttcaagc
atcccgcagaagctctccgagttccccggccgaacgcagcagtacttcctgaacgtccga
aaccgcctcaacagtcttatgcctcaagatgccctgcggtcccgctccccgtctccatcc
tcccctaacggtagcgctctcgagttgcccaacgtgccatcctattcacgcctgccaccc
atcgtcagcccgccatccaagcagctcagctgcctgtcgcggcagctgtctggtctctct
aacccggcgttcttcatcgaagatgactcagacatttcaccaataagacctgcagagagc
tccagccttagccttcgtccagctgtcaatgtagaggatgttgactcggttcatgagaga
agaggagcgggaggagcaggaggagcaggaggaggaggaggaggaggaggaggggaggaa
cagagtaatatccccaaaatcctcaccccacaggaccccaaacttacaacgctgaccgtc
cctgtgaccccatcagtaggtcgtcagagtaaaggcgataaagatagtgggaggaatcgt
aggactatctggagaaagattaggaggctacgttctcaaagtgaagatgatgatgacgaa
ggaagcatccccgtcagagcgtggccgagccagtccagcctgcacagcacggatgacatt
ctgaaagaacgtccggcgtcttcagccagtcagaccagcaccgtggtcaacgagcgactc
caggagctcgtcaagatgttcaaagagagaacagagaaggcgaaggagaaactcattgaa
ccagacagctcagatgaagacagcatcgttccctctcctcctcagcccccggctcctcaa
cccgctcccagaggcggagcaccggacgcggaagagaaggagaaccaagcaggtccgtcg
ggaggaggaggaggaggtggaggaggaggagaagagggagtaggagaggagagtgggtca
gaggaggagcagtctagccgctgctgcaaggtgaaaactcttcggtgcatacgagcctgt
acgcacttccgcttccctgccagcatcgaccctttcaccaacctgatgtacgtgctgtgg
ctgtttctggtgtgtctggcctggaactggaacgtgtggttcatcccggtgcgctgggcc
ttcccctaccaaaccccagacaacatttgctattggctggtgaccgactacgtgtgcgac
ctcatttacatcctggacatcaccatttttcagccgcgcctgcagtttgtgtgcagtggg
gacatagtgtgtgacaaaaaagagatgagaaagaactacatgaaaaccaaacgcttcaag
tttgatgtagccagcctggttcccctggagctcttctattttaaaaccggcatcaaccct
ctgcttcgcttacccagactcctgaagatcaagtccttctatgagttcaacgagcgtctc
gaggccatcttgaccaaagcctacatctacagggtgatccgtaccaccacctatcttctt
tactgcctccactgtaatgcctgcctctactactggggctctgccttcacaggactgggg
tctaccaagtgggtgtacaatggcgagggaaacagttacattcgctgttactactttgcg
gtgaagaccctgatcactattgggggtctgccagatcccaccaccctgttcgagatcatc
ttccagctcatcaactactttgtcggagtctttgtcttctccatcatgattggacagatg
cgtgacgtggtcggtgcagccaccgcaggtcaaacctactaccgcacctgcatggacaat
accatcaaatacatgtcctcctatcgcatcccaaaagatgtccagaaccgcgtcaaaacc
tggtacaactacacctggcagtcgcaaggcatgctggatgagcaggagctgctgactcag
ctgccagataaaatgcgtctggacatagccatagatgtcaactactccatcgtgagcaaa
gtccctctgtttcagggttgtgacagacagatgattttcgacatgctaaaaagcctacgc
tccgtcgtctacctacctggcgattatgtctgcaaaacgggcgaggtaggccgggagatg
tacatcataaaggcaggcgaggtgcaggtggttggaggaccggaggggaggacggtgttc
gttactctcagagcaggatcggtctttggagagatcagtttgctttcagtcggcgggggc
aacaggcgcacagccaacgtgattgctcatggcttcgccaatctcttcatcctggaaaaa
aaagacctgaatgagatcctggtccactaccccgaatccaagaaactgctccgcaagaaa
gccaggaagatgctcaccaagggaaagaaacctgagcccaaagaagacactaaggaggcc
cctcgggtaccggcggctcctgtcaggcccgagacccccaaactgctgagagcagcgctt
gagatgaccgagaaatactctggacttaaagcagccctgactaaagtcaaggagaagacc
aacaagtccagtatctcattacagccgtccatctcctcctccctgcctcctccatccccc
gcctccagctccggacccgacagagacgtggacacgccgtcacccgtctatgccggcccc
gcaacatatcgctcggcctcccgtgcaatgccccagtcttcatcacagtgccacgacgac
gccatcgaacaggagggtgacagtgagggtgaaggggacgagggcgggaagaggaaagaa
aagaagttgcgatga
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integrated database retrieval system
