Brachyistius frenatus (kelp perch): 138631195
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Entry
138631195 CDS
T10614
Symbol
cngb1a
Name
(RefSeq) cyclic nucleotide-gated channel beta-3
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
138631195 (cngb1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bfre04040
]
138631195 (cngb1a)
Ion channels [BR:
bfre04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
138631195 (cngb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
Ribosomal_60s
PAZ_4
ANIS5_cation-bd
Pyr_redox_3
Motif
Other DBs
NCBI-GeneID:
138631195
NCBI-ProteinID:
XP_069572103
LinkDB
All DBs
Position
Unknown
AA seq
1289 aa
AA seq
DB search
MLSWVIKVVPQPPVPPQPQDVEEKKDEKPAAAPPPPVAPPPAPEKKVKFKEECKNESPKA
DKPKKEVLPIPANSPAPSSPSSMLAWITLPQPPVSPKLNRADSSAKEEMPPPPRKGMMAW
ISQGLEKVIPQPDLKVKETPAAEQPAEQPAEQVCTGSTEAVQVIQTPPSSVPESRIVVVE
VESEREDSKTIPPSHSMMGWIKHGMEKVVPKPEIHIHYKGDGNEKTEAPASTKAETPPPS
PKPAPKPAPKPASETEKPTNEVEPQPNMMGWIVSGFGRMLPQPAQKPDAGSNDVQNISIV
QKKSDLVLEDVEPDKEAKPAQSNENRKPSEKKKADVEMQMEPLTGTVKKEAGEAALAQME
GRLERLEAARVAEEMARKAAEEAVRQLEVEHSAKIVIETLPETNEQLPNILEEENEDDPE
LQNLQEDSEDSANNRTPEENKVTVENNKHTVEEEKNPDLCLVDVCPGEDEEEVTPTSTEV
EPGSERRDLPSPSPATMDQTSAAAEGGSGGSCKKSLAGAPMVKVEDVDRDVQLGKSLNIP
QIITTPEPESAVRTIPEFSSACDVLADEEDSELLKATGLKNWFSQGDLLTADDQTRPLSA
ASVGSVLIQDRLSELVRLFKGRTERLKERLLDPDESEEESPSASPTKAPPPPPPPPPAEE
KKDDAAAEEEEEEDEESMFQFEFLGKPVKFPTMKLPPMPDWLRAIMSYRFPSSIDPFTDI
IYVIWLFFVVAAWNWNMWLIPVRWAFPYQTPENIHLWLLADYSCDFIYILDILVFQPRLQ
FVRGGDIVCDKKDMRENYMTTERFKMDVISLFPMEVFYYFTGVNSLLRFPRLLKYMVFFE
FNDRMEAVMKKAYIYRVIRTSMYLLYSLHINACLFYWGSDYEGLGSTKWVYNGKGNAYIR
CYYFAVKTLITIGGLPDPTTVFEITFQLINYFVGVFAFSIMIGQMRDVVGAATSGENFYR
ACMDSTVKYMNSYNIPRDVQNRIKTWYDYTWKIQGMLDEQELLMQLPDKMRLDIAVDVNY
TIVSKVALFQVRNKEMCVCVCVCVCSVVYLPGDFVCKKGEIGREMYIIKQGEVQVVGGPD
LETVFVTIRAGSVFGEISLLAGGGGNRRTANVKAHGFANLFILDKKDLAAILVNYPESQK
LLRKKAKKMLTKDVKPDEKEAKEAVPVIPPRPDTPKMFKAALKLTEQAGIDGTFAKLKLA
YKPSEGDGQAPPSISPVPPPSPMHRRSPIPRLALPDDGDDTVAETADSSVLIRMTPRQEG
EEVLTVEVSRDGGREEEEEEEEEEEEEEE
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atgttgagctgggtgatcaaagtcgttcctcagccacctgtgcctcctcaaccccaagat
gttgaagaaaagaaggacgagaaaccggcagctgctccgccccctcccgtagccccgcct
ccagctcctgagaagaaagtaaagtttaaagaagagtgcaaaaatgaaagtccgaaagct
gacaaacccaaaaaggaagtcctgccgataccagcgaacagcccggcgccgtcctctccg
tccagcatgctggcgtggatcactctgcctcagccgccggtctcaccgaaactcaaccga
gccgactccagcgccaaggaggaaatgccgccgccgcccaggaaaggaatgatggcctgg
atctctcagggtttggagaaagtcattcctcagcctgatctgaaggtcaaagagacgcct
gcagctgagcagccggctgaacagccagctgagcaggtctgcacaggaagcacagaagca
gtccaagtgattcagactccgccctcatcagttccagagtctcggatcgttgtggtcgag
gtggaatcagagcgagaggacagcaagactatcccgcccagccacagcatgatgggctgg
atcaaacacggaatggagaaggtggttcctaagccggagatccacatccactataaggga
gacggaaacgagaagactgaagctccagcttcgacgaaagctgaaactccaccgccgtcc
cccaaaccagcccccaaaccagcccccaaaccagcctcagagacggagaagcccacaaac
gaagtggagccgcagcccaatatgatgggatggattgtcagtggattcggccgcatgttg
cctcagcctgcacagaagccggacgcaggaagtaacgacgtgcagaacatcagcatcgta
cagaagaagagcgatctggtgctggaggacgtggaaccggacaaggaggccaagccggcg
cagagcaatgagaatcgaaagccgtcggaaaagaagaaagcagatgtggagatgcagatg
gaaccactgactggcaccgtcaagaaggaggccggggaggcggctctagctcagatggag
ggaaggttagagcgtctggaggcggctcgcgtggccgaggagatggccaggaaagcagcc
gaggaggcagtccgacagctggaggtggagcattcggctaagatcgtcatagaaacgcta
ccagagacaaacgagcaactgcccaacatcctggaggaggaaaacgaggacgatccagag
ttacaaaacctgcaggaggacagcgaagacagcgcaaataataggactcctgaggaaaat
aaagtaacagtggaaaataacaaacacactgttgaggaagaaaaaaaccctgatctgtgc
ctggtggacgtctgtccgggcgaagacgaagaggaagtcacccctacttcaacggaggtc
gagccggggtcggagaggagagacctgccgagtccgtcgcccgccaccatggatcagacc
agcgcagctgcagaaggtggaagtggagggagctgcaagaaaagtttagctggagcgccg
atggtgaaggtggaggatgtggatcgggacgtgcagctgggaaaaagcctgaacatcccg
caaattatcacgaccccggaaccggagtccgccgttcggacgatcccagagttcagctct
gcctgtgatgtgcttgcagacgaggaggacagcgagttgctgaaggccaccggcctgaag
aactggttcagtcaaggagacctgctgacggcggacgaccagacgcgtccgctgtcggcc
gccagcgtcggcagcgtgctgatccaggaccgcctcagcgagctcgtcaggctgttcaaa
ggtcggacagagcggctgaaggagcggctgttggacccggacgagtccgaggaagaaagt
ccttcagcctccccgaccaaagctccacctccgccgcctcccccgcctccagcagaggag
aagaaggacgacgcggcggcagaagaagaagaagaagaagacgaagagtcgatgttccaa
tttgaattcctgggaaagccggtgaaattccccacaatgaaacttcctccgatgcccgac
tggctccgagccatcatgtcgtaccgcttcccctccagcatcgacccgttcaccgatatc
atctacgtcatctggctgttcttcgtggtggcggcgtggaactggaacatgtggctgatc
cccgtccgctgggcgttcccctaccaaacccccgaaaacatccacctgtggctgctggcc
gactacagctgcgacttcatctatatcctggacatcctcgtcttccagccgaggctgcag
ttcgtccgcggaggagacatcgtgtgtgataaaaaggacatgagagagaattacatgacc
accgagagatttaagatggacgtcatcagcctgtttcccatggaggtattttactatttc
accggcgtgaactctctgctgagattccctcgtctgctgaagtacatggtcttctttgag
ttcaacgacagaatggaggctgtgatgaagaaagcatacatctacagggtgattcgaacc
tccatgtacctgctgtactctctgcacatcaacgcctgcctcttctactggggctccgac
tacgaaggactcgggtccaccaagtgggtctacaacggaaaaggcaacgcttacatccgc
tgctactacttcgccgtgaagacgctgatcaccatcggagggctgccggacccgaccacc
gtcttcgagatcaccttccagctcatcaactacttcgtcggcgtcttcgctttctccatc
atgatcgggcagatgagagacgtcgtcggagcggcgacgagcggtgagaacttctaccgg
gcctgcatggacagcacggtgaagtacatgaactcctacaacatcccccgagacgtccag
aaccgcatcaagacctggtacgactacacctggaagatccagggcatgctggatgaacag
gagctgctgatgcagcttcctgataagatgcgtctggacatcgccgtggacgtcaactac
accatcgtcagcaaagtcgccttgtttcaggtcagaaacaaagaaatgtgtgtgtgtgtg
tgtgtgtgtgtgtgttctgtcgtttacctgccgggagactttgtttgtaaaaagggtgag
atcggtagggagatgtacatcatcaagcagggggaggtgcaggtggtgggcggtcccgac
ctggagacggtgttcgtcaccatccgagccggctcggtgttcggggagatcagtctgctg
gcgggaggcggaggcaaccgacgcacggccaacgtgaaggcgcacggattcgccaacctc
ttcatcctggataagaaggacctggcggccatcttggtgaattaccccgagtcccagaaa
ctgctccgcaagaaggccaagaagatgctgacgaaggacgtcaagccggacgagaaggag
gccaaagaggcggtgccggtgatcccgccgcgaccggacacgcccaagatgttcaaggcg
gcgctgaagctgacggagcaggccggcatcgacggaaccttcgccaagctgaagctggcc
tacaagccgtcggagggcgacgggcaggccccgccctccatctctccggtcccgcctccg
tccccgatgcaccggcgttccccgatcccgcggctcgcgctgccggacgacggggacgac
accgtggccgagacggccgacagctcggtcctcatccggatgactccccggcaggaagga
gaggaggtgctgacggtggaggtgagccgagacggaggacgggaggaggaggaggaggag
gaagaggaggaggaggaagaagaggagtga
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