Brachyistius frenatus (kelp perch): 138634287
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Entry
138634287 CDS
T10614
Symbol
scn1lab
Name
(RefSeq) sodium channel, voltage-gated, type I like, alpha b
KO
K04834
voltage-gated sodium channel type II alpha
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bfre04040
]
138634287 (scn1lab)
Ion channels [BR:
bfre04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
138634287 (scn1lab)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
GPHH
ATP-synt_B
PKD_channel
IQ
New_glue
Motif
Other DBs
NCBI-GeneID:
138634287
NCBI-ProteinID:
XP_069577182
LinkDB
All DBs
Position
Unknown
AA seq
2054 aa
AA seq
DB search
MAQLLVPPGPDSFRPFAPESLGAIERRIAEEAARRPRADRRSDGADDDNGPRPNSDLEAG
KSLPFIYGDTPPHLVSTPLEDLDTFYGNQKTFIVLNRGKAIFRFNATPALYILSPFNPLR
RIAIRVLVHSLFSMLIMFTILTNCSFMTLSNPPDWAKNVEYTFTGIYTFESLIKILARGF
CVGKFTFLRDPWNWLDFSVILMAYITEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVG
ALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVRLPLDGNATAGNGSGGDVAE
ATLLDGGGLLELNATETFNWTEYISDESNYYYLPGRRDALLCGNGSGAGLCPEGYTCIKA
GRNPDYGYTSFDTFSWAFLSLFRLMTQDFWENLYQQTLRAAGKPYMIFFVLVIFLGSFYL
VNLILAVVAMAYDEQNQATIEEAQQKEEEFQAMLEQLKRQQEEAQVAAAAAATESGEYGG
RGCGGGGGPTAGSSSSATSKLSSKSAKERRNRRKKRKQREEEEERGGRGKFHKSESEDSI
KRSSFRFSIDANRLSYEKRCSSPNQSLLSIRGSLFSPRRNSRASLFSFRGRARDMGSEND
FADDEHSTFEESDSRRGSLFLPRRLERRCSAVSQTSLGAPRIVLPANGKMHCAVDCNGVV
SLVGGTSVTTSPVGLLLPEGTTTDTELKKRRSGFRQPSADYLEEPGGRQRAMSVASILTN
TMEELEESRQKCPPCWYRFANTGLIWDCCPAWLKIKDVVNTVVMDPFVDLAITICIVLNT
LFMAMEHYPMTKEFDNVLSVGNLVFTGIFTAEMCFKIIALDPYYYFQEGWNVFDGIIVSL
SLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVF
IFAVVGMQLFGKSYKECVCKISDDCKLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEV
AGQSMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDSEMNNLQIAVGRIQRG
ITFVKTTVRQSLRSVCCGGGGGSVKGSVLAEEIKPLDELHSNGKGNCISNHTLVEITKEP
GGGVYPTEGNGRPGGGGLVVGGGGGPAVDDAAGKYPAEECDYMSFIHNPSLTVTVPIAVG
ESDFENLNTEDFSSDSSDVEGSKEKLDTEPHHQRLSSSEGSTVDIRPPGDGVDSVELEPE
ESLDPEACFTEGCVSRFQCCQIDEEGNEYKSWWTLRKTCFIIVEHNWFESFIIFMILLSS
GALAFEDVYIEQRRTIKTVLEYADKVFTYIFILEMLLKWVAYGFVKYFTNAWCWLDFLIV
DVSLVSLVANALGYSELTAIKSLRTLRALRPLRALSRFEGMRSKIKNVVTSSRLSKVVVN
ALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYYCVNTTSDEIFPVSVVNNRSDCMS
LANESARWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRNLEDQPEYEVNLYMY
LYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQ
KPIPRPTNAFQGCVFDCITKQAFDIVIMILICLNMVTMMVETDDQTPEMDQILYWINLVF
IVLFTGEGVLKMISLRHYYFTIGWNIFDFVVVILSIVGMFLSEVIEKYFVSPTLFRVIRL
ARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKREAG
IDDMFNFETFGNSMICLFQITTSGGWDGLLAPILNKREPDCDSQTEHPGNNYKGNCGNPS
VGIFFFVSYIIICFLIVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEVWERFDPGAT
QFMEYSKLSDFADALDPPLRMPKPNMLQLISMDLPMVSGERIHCLDILFAFTKRVLGEGG
EMDVLRGQMEERFMASNPSKVSYEPITTTLRRKQEEMSATVIQRAFRRYLMRLAMKKASA
LYKERLKEGVRDPDKDVMVIGKFPENSISDKTDMTPSTASPPSYNSVTKSDADKYEKEIR
DKENKGKDSKDRKK
NT seq
6165 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagctgcttgtaccgcccggacctgacagcttccgccccttcgcccccgagtcg
ctgggcgccatcgagcggcgcatcgccgaggaggcggcccggagaccgcgggcggaccgc
cgcagcgacggcgccgacgacgacaacgggcccaggcccaacagcgacctggaggcgggc
aagtccctgcccttcatctacggggacacgcccccccacctggtgtccacgcctctggag
gacctggacaccttctacggcaatcagaagaccttcatcgtattgaatcgcgggaaggcg
atcttccgtttcaacgccactcctgccttgtacatcctcagccccttcaaccctctgagg
aggatagcgatccgagtcttagtgcactcgctgttcagcatgttgatcatgttcaccatc
ctgaccaactgttcgttcatgaccctcagtaaccccccggactgggccaagaatgtagag
tacacattcacggggatttacaccttcgagtccctcataaagatcctggcccggggcttt
tgcgtggggaagttcactttcctgcgggacccgtggaactggctggatttcagtgtcatc
ctcatggcgtatataacagagtttgtaaacctaggcaatgtttccgctctgcgcacgttc
agagtattgcgagcgttgaaaacgatctcggtcatcccaggcctgaagaccatcgtgggc
gccctcatccagtcggtgaagaagctgtcggacgtgatgatcctcaccgtgttctgcctg
agcgtcttcgccctcatcggcctgcagctcttcatgggcaacctgcggcagaagtgcgtg
cgcctgccgctcgacggcaacgccaccgccggcaacggcagcggcggtgacgtcgccgag
gcgacgcttctcgacggcggcggcctgctggagctcaacgccacggagaccttcaactgg
acggagtacatcagcgacgagagtaattactattacctccccggccggcgggacgctctg
ctctgcgggaacggcagcggcgccggcctctgcccggagggctacacctgcatcaaagcg
ggccgtaacccggactacggctacaccagcttcgacaccttcagctgggccttcctgtcc
ctgttccgactcatgacgcaggacttctgggaaaacctctaccagcagaccctgcgcgcg
gcggggaagccctacatgatcttcttcgtgctggtcatcttcctgggctccttctacctg
gtcaacctcatcctggccgtggtggccatggcctacgacgagcagaaccaggccaccatc
gaggaggcccagcagaaggaggaggagttccaggccatgctggagcagctgaagaggcag
caggaggaggcacaggttgccgcggcagcagcagccaccgagagcggggagtacggcggg
agggggtgcggcggcggcggcggccccactgccgggtcgtcgtcctcggcgacgtcgaag
ctgagctccaagagtgccaaggagcggcgcaaccggcggaagaagaggaagcagcgggag
gaggaggaggagcgggggggccgcggcaagttccacaagtccgagtccgaggacagcatc
aagaggtccagcttccgcttctccatcgacgccaaccggctgtcttacgagaagagatgc
tcctcgcccaaccagtctctcctcagcatccgcggctccctcttctccccccggaggaac
agccgcgccagcctcttcagcttccgcggccgcgcccgcgacatgggctccgagaacgac
ttcgccgacgacgagcacagcaccttcgaggagagcgacagccggcgcggctcgctgttc
ctgccgcgacgcctcgagcggcgctgcagcgccgtcagccagacgagcctcggggcgccg
cgcatcgtgctgcccgccaacggcaagatgcactgcgcggtggactgcaacggcgtggtg
tcgctggtcggcgggacgtccgtgacgacctctcccgtaggtctcctgctgcccgagggg
acgacgacggacacggagctgaagaaacgccggtcgggcttccgccagccgtccgcggac
tatttagaggagccggggggccggcagagagccatgagcgtggccagcatcctcaccaac
accatggaagagctcgaggagtcgagacagaagtgtccgccctgctggtacagattcgcc
aacaccggtctgatctgggattgctgccccgcctggctgaaaatcaaagacgtggtcaac
acggtggtcatggacccgtttgtggatctggccatcaccatctgcatcgtcctcaacacc
ctcttcatggccatggagcactaccccatgaccaaagagttcgacaacgtcctctccgtc
ggaaacctggtgttcacgggcatcttcacggcggagatgtgcttcaagatcatcgcactg
gatccctactactacttccaggagggctggaacgtcttcgacggcatcatcgtcagcctg
agtctcgtcgagctcggcttggccaacgtcgaaggcctgtcggtgctgcgctccttcaga
ttgctgagggtcttcaagctggccaagtcgtggcccaccctcaacatgctgatcaagatc
atcggcaactcggtgggcgcgctgggcaacctcaccttggtgctggccatcatcgtcttc
atcttcgccgtggtgggcatgcagctgttcggcaagagctacaaggagtgcgtgtgcaag
atctccgacgactgcaagctgccgcgctggcacatgcacgacttcttccactccttcctc
atcgtgttccgcgtgctctgtggcgagtggatcgagaccatgtgggactgcatggaggtg
gcgggccagagcatgtgcctgatcgtcttcatgatggtcatggtcatcgggaacctggtg
gtcctcaacctcttcctggccctcctcctgagctccttcagcgccgacaacctggcggcg
accgacgacgacagcgagatgaacaacctgcagatcgccgtggggcgcatccagcggggc
atcacgttcgtcaagacgaccgtgcggcagtccctccggagcgtgtgctgcggcggcggc
ggaggcagcgttaagggctccgtcctggcggaggagatcaaaccgctggacgagctgcac
agcaacggcaaaggcaactgcatctccaaccacacgttggtggagatcaccaaggagccc
ggcggcggggtgtacccgacggagggcaacgggcggcccgggggcggcggcctggtggtc
gggggcggcggcggcccagcggtcgacgacgcggcggggaagtacccggcggaggagtgc
gactacatgtcgttcatccacaaccccagcctgacggtgacggtgcccatcgcggtgggc
gagtcggacttcgagaacctgaacacggaagacttcagcagcgactcttcggacgtggag
ggcagcaaggagaagctcgacacggagccccaccaccagcgtctgagctcgtcggagggg
agcacggtcgacatccggccccctggggacggggtggactcggtggagctggagcccgag
gagtccctggaccccgaggcctgcttcacggagggctgcgtcagcaggttccagtgctgc
cagatcgacgaggagggcaacgagtacaagagctggtggacgctcaggaagacctgcttc
atcatcgtggagcacaactggttcgagtccttcatcatattcatgatcctgctcagcagc
ggggcgctggccttcgaggacgtctacatcgagcagcggcggaccatcaagacggtgctg
gagtacgccgacaaggtcttcacctacatcttcatcctggagatgctgctgaagtgggtg
gcgtacggcttcgtcaagtacttcaccaacgcctggtgctggctcgacttcctcatcgtg
gacgtgtccttggtcagcctcgtagcgaacgctctgggctactccgagctcaccgccatc
aaatctctgaggacgctgcgagccctgcggcccctgagggccctgtctcggttcgagggc
atgaggtcaaaaatcaaaaatgttgtgacttcatcccgcctctctaaggtggtggtgaac
gctctgctgggcgccatcccctccatcatgaacgtgctgctggtgtgcctcatcttctgg
ctcatcttcagcatcatgggcgtcaacctgttcgcggggaagtactactactgcgtcaac
accaccagcgacgagatcttccccgtcagcgtcgtcaacaaccgcagtgactgcatgagc
ctggccaacgagagcgcccgctggaagaacgtcaagatcaacttcgacaacgtcggcgcc
gggtatctggctctgctgcaagtggcaacatttaagggttggatggacatcatgtacgcg
gcggtggactctcgaaacttggaggaccagcccgagtacgaagtgaacttgtacatgtac
ctctacttcgtcatcttcatcatcttcggctccttcttcaccctcaacctgttcatcggc
gtcatcatcgacaacttcaaccagcagaagaaaaagttcggaggtcaggacatcttcatg
acggaggagcagaagaaatactacaacgccatgaagaagctgggctccaagaaaccgcag
aaaccgatacctcgaccaacgaatgcatttcaaggctgcgtgttcgactgcatcacgaag
caggccttcgacatcgtcatcatgatcttaatctgccttaacatggtgaccatgatggtg
gagacggacgaccagacgccggagatggaccagatcctctactggatcaacctggtcttc
atcgtgctcttcaccggcgagggcgtgctcaagatgatctcgctgcgccactactacttc
accatcggctggaacatattcgacttcgtggtggtgatcctgtccatcgtcggtatgttt
ttatccgaagtcatcgagaagtacttcgtgtcgccgacgctgttccgagtgatccgtctc
gcccggatcggacgcatcctccgtctcatcaagggcgccaagggcatccggacgctcctc
ttcgccctgatgatgtccctgccggccctcttcaacatcggcctcctcctcttcctcgtc
atgttcatctacgccatcttcggcatgtccaacttcgcctacgtcaagcgggaggcgggc
atcgacgacatgttcaacttcgagaccttcggcaacagcatgatctgcctgttccagatc
accacgtcgggcggctgggacggcctgctggcgccgatcctcaacaagcgggagcccgac
tgcgacagccagacggagcacccgggcaacaactacaagggaaactgcggcaacccgtcg
gtgggcatcttcttcttcgtcagctacatcatcatctgcttcctcatcgtggtcaacatg
tacatcgccgtcatcctggagaacttcagcgtggccacggaggagagcgccgagccgctg
agcgaggacgacttcgagatgttctacgaggtgtgggagcgcttcgaccccggcgccacg
cagttcatggagtacagcaagctgtcggacttcgccgacgccctggacccgccgctgcgc
atgcccaagcccaacatgctgcagctcatctccatggacctgccgatggtgagcggcgag
cgcatccactgcctcgacatcctcttcgccttcaccaagcgcgtgctcggcgagggcggc
gagatggacgtgctgcgcgggcagatggaggagcgcttcatggcgtccaacccgtccaag
gtgtcctatgagcccatcaccaccacgctgcgccgcaagcaggaggagatgtcggccacc
gtcatccagagggccttccgccgctacctgatgcgcctggccatgaagaaggcgtcggcg
ctctacaaggagcggctcaaggagggcgtccgcgaccccgacaaggacgtcatggtcatc
ggcaagttccccgagaactccatctcggacaagacggacatgacgccgtccacggcctcg
ccgccctcctacaacagcgtgaccaagtcggacgcggacaagtacgagaaggagatcagg
gacaaggagaacaaagggaaagactccaaggaccggaagaaataa
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integrated database retrieval system
