Brachyistius frenatus (kelp perch): 138637069
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Entry
138637069 CDS
T10614
Symbol
taf1
Name
(RefSeq) transcription initiation factor TFIID subunit 1 isoform X1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
138637069 (taf1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
bfre01001
]
138637069 (taf1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfre03021
]
138637069 (taf1)
03036 Chromosome and associated proteins [BR:
bfre03036
]
138637069 (taf1)
Enzymes [BR:
bfre01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
138637069 (taf1)
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
138637069 (taf1)
Protein kinases [BR:
bfre01001
]
Serine/threonine kinases: Other
TAF1 family
138637069 (taf1)
Transcription machinery [BR:
bfre03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
138637069 (taf1)
Chromosome and associated proteins [BR:
bfre03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
138637069 (taf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
zf-CCHC_6
Cac1_C
Motif
Other DBs
NCBI-GeneID:
138637069
NCBI-ProteinID:
XP_069581618
LinkDB
All DBs
Position
Unknown
AA seq
1991 aa
AA seq
DB search
MSDSDSDEDQDRPFSITGFLFGNINEDGQLEDDSVLDHESKKHLAGLGNLGLGSLITEIT
ANEDDDKEENRDSSSVDADGWVKSTEDAVDYSDISEVAEDETKKYRQAMGSLQPSRKTDD
EDDYDADSEDIDSKLMPPPPPPSLPTCAKKDEPSSQSSNAAGEDGDGIILPSIIAPSSTA
DKVDFSSSSDSESETDRPCQGSGAGGPPDSLTLPLAGIMQKDAAKALPSVTQLFPEFRPG
RVLRFLRLFGPGKNMPSVWRSARRKKKRKHRDPLPGTPPPEGEPPEQSQEKTSGWIYEYA
PAPPPEQCLSDDEITMMAPVESKFSQTCGDGDKEAESRPKVAEWRYGPAQLWYDMLGVPE
DGSHFNYGFKLKEMESSELQKQDAPQEVTEPYQEVQRLDDDNEDGNDDGDKDRQALENEL
FLMVTQLQWEDDIIWNGEDIKHKGTKTQRASLAGWLPSSMTRNANAYNAQQGLTRSNSLL
VPPTPPPMPKASSISGSKREKNSHDNQTFHEEDCPWFSIFPIDNEELVYGRWEDNIIWDD
QEMDYLLMPPVLTLDPNDENIILEIPDEKEATTSHSPSKENKKENAIKKSRILLGKTGVI
KDEPQQNMSQPEMKDPWNLSNDEFYYPKQQGLRGTFGGNIIQHSIPALELRQPFFPTHMG
PMKLRQFHRPTLKKYSFGALAQPGPHAVQPLLKHIKKKAKMREQERQASGGGDMFFMRTP
QDLTGKDGDLILAEYSEEYPPLIMQVGMATKIKNYYKRKPGKDPGAPDLKYGETVYCHTS
PFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLVLRTRHGYYIRELVDIIVVGQECPL
FEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRRIRMEDIKKAFPSHSESSIRKRLKL
CADFKRTGMDSNWWVLKPDFRLPTEEEIRAMVSPEQCCSYCSMLVAEQRLKDAGYGEKSF
FAPEEENEEDFQMKIDDEVRTAPWNTTRAFISAMKGKCLLEVTGVADPTGCGEGFSYVKV
PNKPTQQKDDKEPQPVKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDV
VRTMSTEQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLESTEVLSTDTD
SSSAEDSDFEEMGKNIENMLQNKKTSSQLSREREEQERKELQRMLMGEESDRDHKGRKER
RKGLSSSLSTSSHKDDDTSSVTSLNSSATGRRLKIYRTFRDEDGKEYVRCETVRKASVID
AYTRIRTTKDDEFIRKFALFDEQHREEMRKERRRIQEQLRRLKRNQEKDKIKGPPEKKTK
KVKERPDLKVKLKCGACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQEEELEKTVIHN
DNEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFPKQQLPPKKKRRVGSAVHCDYLNKP
HKAIHRRRTDPMVTLSSVLESIINDMRDHPNTYPFHTPVNAKVVKDYYKIITRPMDLQTL
RENVRKRMYPSREEFREAVEVVVKNSATYNGGKHPITQVAQSMLDLCDTKLKEKEDRLVR
LEKAINPLLDDDDQVAFSFILDNIVTQKMMVVPDSWPFHHPVNKKFVPDYYKVIVSPMDL
ESIRKNISKHKYQNRDVFLSDISLIHANSIKYNGPDSPYTKTALDIVNVCKQTLSEYDEH
LTQLEKDISTAKEAALDAADLESLDPMTPGPYTPQPADLFDSGASGSLPREPSSLFSEGP
LVVAPEKRGGQGRHGRRPGEEESDVDIEGFEEEDDGKPKTPAPAEDAEGDLEDEDDEEDM
LLPPRRRLHDQEEEDEEEEEEEGDDGRSNRPAQASVLYQDLLMSDGEDDASEEEGDNPFS
SIQLSESGSDSDRELDVRPPPPRRAQETARMGMEQDESMMSYEVDGPDEPHMEDSIVSYG
SYEETESRSQMQPSSMGNGEEYGISEEEEEDEEDEARRRGPAVLSQVQLSEDEESEEFRS
IGGDSDMDSDN
NT seq
5976 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactcagacagcgacgaggaccaagatcgccctttttccataactggcttcctc
tttggaaacatcaatgaagatggacagctggaggacgacagcgtcctggaccatgagtct
aaaaagcatctggctggtttgggtaatctgggtctgggctcgctcattacagagatcaca
gccaatgaggatgatgacaaggaggaaaacagagactcgagcagcgtggatgcagatggt
tgggtgaaaagcaccgaagatgcagttgattattctgacatcagtgaggttgctgaggat
gagacgaagaagtaccgtcaggccatggggtccttgcagcccagcaggaaaacagatgat
gaggatgactatgatgcagattctgaggatattgactctaagcttatgcctcctccacca
ccaccaagtcttcctacatgtgctaagaaagacgaaccctcctctcagagttcaaatgca
gccggtgaagacggtgacggcatcatcctgccctccatcatcgccccgtcctctaccgct
gataaggtcgacttcagcagctcctcagactccgagtcagaaacagaccgtccctgccag
ggctcgggggctggaggccccccagacagcctcaccctccctcttgctggcatcatgcag
aaagatgctgccaaagcattgccaagtgtcacacagctcttcccagaatttaggcctgga
agggtgcttcggttcttacgactgttcggtcctggaaagaacatgccatcagtttggagg
agcgcccgcaggaaaaagaagcgaaaacacagagaccctctgcctgggacgcctcctcca
gagggagagcccccagaacaaagccaagagaagacgtctggatggatttatgaatatgca
cccgctccacctccagagcagtgtctctctgatgatgagataaccatgatggctccagtg
gaatcaaagttctcacaaacctgcggtgatggagacaaggaggcagagtctcgacccaaa
gtggcagaatggagatacggtccagcccagctctggtacgacatgctaggcgtccctgag
gatggaagccatttcaactatggctttaaacttaaggaaatggagtccagtgagcttcag
aagcaggatgcgcctcaagaagtaacagagccttatcaagaggttcagaggctggatgat
gacaacgaggatggcaatgatgatggagataaagacagacaggccctggagaatgagctc
ttcctgatggtcacccagttgcagtgggaggacgatatcatttggaatggggaagacata
aaacacaagggcaccaagactcagagagccagcctggcgggttggctgccctctagcatg
acccgcaatgccaacgcttataatgcacagcagggtctgacaagaagtaattccctgctg
gtgccacctactcctccacccatgcccaaagcttcctccatctctggctcaaagagagaa
aaaaacagccatgataatcaaacgtttcatgaagaagactgtccttggttctccattttt
cccattgacaatgaggagttggtgtacggccgttgggaagacaacattatctgggatgac
caggagatggattacctgctcatgccacctgttcttacactggatcccaacgatgagaat
ataattctagaaattcccgatgaaaaggaggcgacaacctcccactccccatcaaaagag
aataaaaaggaaaatgcgatcaagaagagccgcatcctgctggggaagactggggtgata
aaagatgagccacagcagaacatgtcccagcctgagatgaaggacccctggaacctttcc
aatgatgagttctactatcccaaacagcagggcctgaggggaaccttcggtggcaacatc
attcagcactccatcccagccctggagctgaggcagcccttcttccccactcacatggga
cccatgaagcttcgtcagttccatcgaccgactctgaagaagtactcattcggagctttg
gctcagccgggtccccatgctgttcagcctctgctcaaacacataaagaagaaggccaag
atgcgagagcaagagcggcaggcatcaggaggaggagacatgttcttcatgcgaaccccg
caggacttgacgggcaaagatggagatctgatccttgctgagtacagcgaggaataccct
cctctcatcatgcaagtcggcatggcaactaagatcaaaaactactacaaaaggaaacct
ggaaaagatcccggagcacccgaccttaaatatggagagaccgtgtactgccacacatca
cctttcctgggttctctgcatcctggacagctgctgcaggcgtttgaaaacaacctcttc
cgtgccccaatctacctgcacaagatgccagagacagatttcttggttctacgaacgcga
catggctactacatcagagagcttgtggacatcattgtcgtcggtcaggagtgccctttg
tttgaagttccagggccgaactccaaacgagccaacactcacatcagagacttcctgcag
gtattcatttaccgcttgttctggaagagcaaggatcggccccggaggatccgcatggag
gatataaagaaagcgtttccctcccactcagagagcagcatcaggaaacgactcaaactc
tgcgctgacttcaaacgtacagggatggactccaactggtgggtactgaagcctgacttc
agattgcctacagaagaggagatcagggccatggtgtctccagagcagtgctgctcttac
tgcagcatgctggtggcagagcaaaggctcaaggatgctggatacggcgagaaatccttc
tttgctccagaggaggagaatgaagaggactttcaaatgaagatcgatgatgaggtgcgg
acagctccttggaacacgacaagagccttcatttctgccatgaaggggaagtgcctgctg
gaggtgacaggcgtggctgatcctacaggctgcggagagggtttctcctacgtcaaagtg
ccgaacaagcccacccaacagaaggacgacaaagagccacagccagtgaagaagacagtg
acagggacggatgctgatctgaggaggctctcactgaagaatgccaagcagctgctgcgc
aagtttggtgttccagaggaggagatcaagaaactctcgcgctgggaggttattgacgtg
gtgaggaccatgtccacggagcaggcgcgctccggcgagggacccatgagcaagtttgcc
cgaggctctcgcttctctgtcgctgaacaccaggagcgatacaaggaggagtgccagagg
atctttgacctgcagaacaaggtgttggagtcgacagaggtgctctccacagacacagac
agcagttcggcagaggacagtgactttgaggagatgggtaagaacattgagaacatgctg
cagaacaagaagaccagctcccagctttcccgcgagagggaagagcaggagaggaaggag
ctgcagaggatgctcatgggtgaggagagcgaccgggaccacaagggacgcaaggaacgg
cgcaaaggcttgtccagttccttgtccaccagctcccacaaagatgatgacacatcgtcc
gtcaccagcctaaactcctcggcaacgggccggcgactcaagatctaccgcaccttcagg
gatgaggatggcaaggaatacgtccgctgtgagacggtgcgcaaagcttcagtcatcgac
gcctacacccggatcagaaccaccaaagatgatgaattcatacgaaagttcgccctcttt
gacgagcagcacagagaagagatgaggaaggagcggcggcgaattcaggagcagctgagg
cggctgaagaggaaccaggagaaggacaagatcaagggacccccggagaagaagaccaag
aaggtcaaagagagaccagacctcaaggtaaaactaaagtgcggcgcatgtggagctatt
gggcacatgaggaccaacaagttctgcccactatattatcaaaccaacgctccgccctcc
aaccccgttgccatgacggaggagcaggaggaggagctggaaaagaccgtcatccacaac
gacaatgaggaactgatcaaggtggagggcactaagattgtgctcggcaaacagctcatc
gaaagcgctgatgaagtgcgcagaaagtctctcgtgctcaagttccccaagcaacagctg
ccaccaaagaagaagagacgcgtgggcagtgcagtccattgtgactacctcaataaaccg
cacaaagccatccaccgcagacgtactgaccccatggtaaccttgtcctctgtgctggaa
agcatcatcaatgacatgcgggatcaccccaatacgtacccgttccacacaccagtcaat
gccaaggtcgtgaaggactactataagatcatcactcggcccatggacctgcagacactg
agggagaatgtacgcaagcggatgtacccgtccagggaggagtttcgtgaagcggtggag
gtggttgtcaagaacagcgccacctacaatgggggaaaacatcctataacacaagtggct
cagtccatgctggacctgtgcgatactaaactaaaagagaaggaggacaggctggtgagg
ctggaaaaagccatcaaccccctgctggatgatgacgatcaggtggccttctccttcatc
ctggacaacattgtgacccagaaaatgatggtggttcctgactcatggccgtttcaccat
cctgtcaacaaaaagtttgtgccagattattataaagtaatcgtaagccccatggatctg
gagtccatccgcaagaacatctccaaacataaataccagaaccgagacgtgttcctctct
gatatcagtctcatccacgcaaacagtatcaagtacaacggccccgacagtccttacacc
aagacagccctggatatcgtcaatgtgtgcaagcagaccttgtcagagtatgatgagcac
ctgacacagctggagaaggacatctctactgctaaagaggcagctctcgatgcagcagat
ttagagagtctggacccaatgacgcccgggccatacacaccgcagcctgctgatctgttt
gacagcggggcttcagggagtctgcccagagagcccagcagcctgttctctgagggacct
ctagtggttgctccagagaagagaggggggcagggacggcacggcagaagacccggagaa
gaagagtcagatgtggatatcgaaggctttgaggaggaagatgacggcaaacccaagact
cctgctcctgcagaggatgcagagggagatctggaggacgaagatgacgaagaagacatg
ctgctgccacctcgcaggcggctacacgaccaagaggaagaggatgaggaggaggaagaa
gaggagggagatgacgggagatcgaaccgccccgcccaagccagcgtgctgtatcaggac
ctgctcatgtctgacggggaggatgacgccagcgaagaggagggcgacaaccctttttcc
tccatacaactgtcggagagcggcagcgactctgaccgagagttggatgtgcggcctcca
cctccacgcagagctcaggagacggcccgcatgggcatggagcaggacgagagcatgatg
tcatacgaagtggacgggcccgatgagccgcacatggaagacagcatcgtcagttacggc
agctatgaggagacagagagtcggagtcagatgcaaccatccagcatgggaaacggagaa
gaatacggcatcagtgaggaggaggaggaagatgaagaggacgaagcacggaggagaggc
ccggctgtgctctcccaggtccagctcagtgaagacgaggagagtgaagagtttagatct
atcgggggagacagcgacatggactctgacaattag
DBGET
integrated database retrieval system
