Blastomonas fulva: B5J99_15935
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Entry
B5J99_15935 CDS
T05612
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
bfw
Blastomonas fulva
Pathway
bfw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bfw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B5J99_15935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfw03400
]
B5J99_15935
DNA repair and recombination proteins [BR:
bfw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B5J99_15935
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
B5J99_15935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
DnaJ_CXXCXGXG
AAA_21
AAA_23
ATPase
TylF
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ASR52766
UniProt:
A0A222X311
LinkDB
All DBs
Position
3349359..3352304
Genome browser
AA seq
981 aa
AA seq
DB search
MLTHISVRGAREHNLKGVDIDLPRDQLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLSA
YARQFLEMMQKPDVEHIDGLSPAISIEQKTTSRNPRSTVATVTEIYDYMRLLWARVGVPY
SPATGLPITAQTVSMMVDRVMALAEGTRFYLLAPVVRGRKGEYRKELAEWQRAGFTRVRI
DGEFYEIDEAPALDKKYKHDIEVVVDRMAVREGIETRLADSFETALKLAEGLAYVDLADG
TVAEPGSSSPTPSPSTEPQATEGEREGGKKGMKNVGIPDNRIIFSEKFACPVSGFTIEAI
EPRLFSFNAPQGACPACDGLGEKMYFDPQLVVPNEDLSLKKGAVVPWAKSNPPSPYYMQV
LASLGREFGFSLDTPWSELPGEVKLIILHGTGGKPVTLRFQDGRKSYEVKKPFEGVIGNL
NRRLLQTDSAWMREELGKYQTAQPCEVCDGARLKPEARSVKIVGEDISISTRRSVSDALA
FFETLNDKLGPQQQQIAKAILKEIIERLGFLNNVGLDYLNLDRTSGTLSGGESQRIRLAS
QIGSGLSGVLYVLDEPSIGLHQKDNDRLLVTLKRLRDLGNTVIVVEHDEDAIRTADYIVD
LGPGAGVHGGEVVAEGTLEQILKSKRSLTAQYLTGERKIEIPAKRRKGNGKKLTVHNARA
NNLTGVTASIPLGTFTCITGVSGSGKSSFTIDTLFAGAARALNGARVIAGAHDKITGLEH
CDKVIDIDQSPIGRTPRSNPATYTGAFTNIRDWFAGLPESLARGYKPGRFSFNVKGGRCE
KCQGDGLIKIEMHFLPDVYVTCEDCGGKRYNRETLEVKFKGHSIADVLDMTVEDAVEFFK
AVPPIRDKMAMLWEVGLGYVKVGQQATTLSGGEAQRVKLAKELSRRSTGQTLYILDEPTT
GLHFEDVRKLLEVLHRLVDQGNSVVVIEHNLDVIKTADWIIDLGPEGGVKGGEIVAEGTP
EKVAKVARSYTGQYLAPMLVR
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgctgactcatatttccgtgcgcggcgcgcgcgagcacaatctcaagggcgtggatatc
gatctgccgcgcgatcagttgatcgtgatcaccggtctttcgggaagcggcaaatcaagc
ctggcgttcgacaccatctatgccgagggccagcgtcgatacgttgaatcgctgtcggcc
tatgcgcgccagttcctcgagatgatgcagaagcccgatgtcgagcatatcgacgggctc
tcccctgcgatcagcatcgagcagaagaccaccagccgcaacccgcgttcgactgtcgcg
acggtgacagagatttacgattacatgcgcctgctgtgggcgcgcgtcggtgtgccctat
tcgcccgccacgggtcttccgatcaccgcgcagactgtcagcatgatggtcgaccgggtg
atggcgctggccgagggtacgcgcttctatctgctcgcacccgtggtgcgcggccgcaag
ggcgaatatcgcaaggagcttgccgaatggcagcgcgccggtttcacccgcgtgcgcatc
gacggcgagttctacgagatcgacgaagcccccgcgctcgacaagaagtacaagcacgac
atcgaggtcgtggtcgaccgcatggcggtgcgtgaaggcatcgagacgcgcctcgccgac
agcttcgaaaccgcgctgaagcttgccgaaggtctggcctatgtcgatctggcggatggg
acggtagcggagccaggaagttcatcccccacccccagcccctccactgagccgcaggcc
accgaaggtgaacgtgaggggggcaagaagggcatgaagaacgtcggcatccccgacaac
cggatcatcttctcagaaaaattcgcctgcccagtgtctggcttcaccatcgaggcgatc
gagcctcggctgttctcgtttaacgcaccgcagggtgcctgccctgcctgcgacggtctg
ggcgagaagatgtatttcgatccccaactggttgtccccaacgaggatctgagcctgaag
aagggcgcggtagtgccttgggcgaagtcgaacccgccctcgccttattacatgcaggtg
ctggccagcctgggccgcgagttcggcttctcgctcgacacgccgtggagcgaactgcct
ggcgaggtgaagctgatcatcctgcacggcaccggcggcaagccggtcacgctgcgcttc
caggacgggcgcaagagctatgaggtcaagaagccgttcgagggcgtcatcggcaatctc
aaccgccgtctgctgcagaccgacagcgcgtggatgcgcgaggagctgggcaaataccag
accgcgcagccctgcgaagtctgcgatggcgcgcggctcaagccagaggcgcgttcggtc
aagatcgtcggcgaggatatctcgatctcgacacggcgttcggtgtccgatgctctggcg
tttttcgagacgctcaacgacaagctcggtccccagcagcagcagatcgccaaggccatc
ctcaaggagattatcgagcggctgggcttcctcaacaatgtcgggctcgactacctcaac
ctcgatcggacctcggggacgctttcgggcggagagtcacagcgcatccggctcgccagc
cagatcggcagcggtctctcgggcgtgctctatgtgctcgacgagcccagcatcgggctg
caccagaaggacaacgaccggctgctggtgaccttgaagcggctgcgcgatctgggcaat
accgtgatcgtcgtcgagcatgacgaggacgcaatccgcaccgccgactatatcgtcgat
ctgggtccgggcgcgggcgtccacggcggcgaggtcgtcgccgaagggacgctcgagcag
atcctcaagtccaagcgctcgctcaccgcgcaatatctcaccggcgaacgcaagatcgag
attccggccaagcgccgcaagggcaatggcaagaagctcaccgtccacaatgcgcgcgcc
aacaatctcaccggcgtgacggcgtcgatcccgctgggtaccttcacctgcatcaccggg
gtatctggctcgggcaagtccagcttcaccatcgacacgctgtttgcgggcgctgcgcgc
gcgctcaacggtgcgcgggtgatcgctggggcgcacgacaagatcacgggcctcgagcat
tgcgacaaggtgatcgatatcgaccaatcgccgatcggccgcaccccgcgatcgaaccca
gcgacgtacacgggtgcgttcaccaatatccgtgactggttcgccggactgcccgaaagc
ctcgcgcgcggctacaagccgggcaggttcagcttcaacgtcaagggcggccgctgcgag
aaatgccagggcgacggcctgatcaagatcgagatgcacttccttcctgatgtttacgtc
acctgcgaggattgcggcggcaagcgctacaaccgcgagacgctcgaggtgaagttcaag
ggccactcgatcgccgacgtgctcgacatgacggtcgaggatgcggtcgagttcttcaag
gcggtgccgccgatccgcgacaagatggcgatgctgtgggaagtgggcctgggctacgtc
aaggtcggccagcaggcaacgacgctcagcggcggagaggcgcagcgcgtcaagcttgcc
aaggaactcagccgccgctcgaccgggcagacgctgtacatcctcgacgaacccaccacc
ggcctgcacttcgaggatgtgcgcaagctgctcgaggtgctgcacaggctggtcgatcag
ggcaactccgtggtggtgatcgagcacaatctcgacgtcatcaagaccgcggactggatc
atcgatctgggccccgaaggcggcgtcaagggcggcgagatcgtcgcggagggcaccccg
gaaaaggtcgccaaggtcgcgcgcagctacaccggccagtatctcgctccgatgctcgtg
cgataa
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