Buchananella felis: ABYF36_02695
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Entry
ABYF36_02695 CDS
T10900
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bfy Buchananella felis
Pathway
bfy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bfy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ABYF36_02695 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfy03021
]
ABYF36_02695 (rpoB)
03400 DNA repair and recombination proteins [BR:
bfy03400
]
ABYF36_02695 (rpoB)
Enzymes [BR:
bfy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ABYF36_02695 (rpoB)
Transcription machinery [BR:
bfy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ABYF36_02695 (rpoB)
DNA repair and recombination proteins [BR:
bfy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ABYF36_02695 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
XEO18261
LinkDB
All DBs
Position
complement(667623..671078)
Genome browser
AA seq
1151 aa
AA seq
DB search
MHASKRVSFGKIHEPLQAPDLLGLQTESFDWLLGNERWKERLAAAPDADALPSVSGLEEI
FTEISPIQDFAETMELSFSDHRLEPPKYTAEECKEKGHTYAAPLYVTAEFINHGTGEIKS
QTVFMGDFPLMTERGTFIINGTERVVVSQLVRSPGVYFERSSDRTSDKDTFSCKVIPSRG
AWLEFEIDKRDAVGVRIDRKRKQSITVFLRALGLSESELREQFADYPLLLAGLDKDGSMT
QEEALLDIYRKIRPGEPPSVEAGRALLENYYFAPKRYDLAKVGRYKINKKLGLDAPLDEA
LLRREDIVAAVRYLLALQKGEETLPGRRGGQDVEIPVEQDDIDHFGNRRIRAVGELIQGQ
VRTGLSRMERVVRERMTTTDAQAIQPTTLINTRPVTAAIKEFFGTSQLSQFMDQNNPLAG
LTHKRRLSALGPGGLSRDRAGMEVRDVHPSHYGRMCPIETPEGPNIGLIGSLATYARINP
FGFVETPYRVVKNGQVTDETRYLTADDEDRHAIAQASAPLDRNGRFVEKQALCRVSGGEP
ALVDVEDIDYMDVSARQMVSVATSMIPFLEHDDANRALMGANMQRQAVPLLRPVSPLVGT
GMEARAAVDAGDVIVVRKGGAGVVTEVSADYICVMEDSGSNHTYRLAKFRRSNQGNCYNQ
RVTVDEGDRVEEGQVIADGPATAGGELALGQNLLVAFMSWEGFNYEDGIILSQRLVSEDV
LTSIHIEEHEIDARDTKLGPEEITRDIPNVSEETLAHLDERGIIRIGAEVGAGDILVGKV
TPKGETELTSEERLLRAIFGEKAREVRDTSLRVPHGESGIVIGVKEASGDDDELPAGVNQ
RITVYIAQRRKITDGDKLSGRHGNKGVISKILPVEDMPFLEDGTPVDIILNPMGVPGRMN
IGQVLEVHLGWIASQGWDATGALAQAKEWAAKLPADGVAAPAGTRVATPVFDGLEADELT
GLLDCTLPTRDGDRLVGVNGKARLFDGRSGEPFPFPISVGYMYILKLHHLVDDKIHARST
GPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTVKSDDVTGRVKVYEAI
VKGEDIPDPGIPESFKVLVKEMRSLCLNVEALDEQGNAIELRETEEDVFRTSEELGIDLG
RRPDARDFEEL
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcttctaagcgtgtttcttttggcaagattcacgagccgcttcaggcaccggac
ctgctgggtctgcagaccgagtctttcgactggctgctcggcaacgagcggtggaaggag
cgccttgcggccgctccagacgccgacgcgctgccgtccgtctctggcctggaggagatc
tttacggagatttctccgattcaagactttgccgagacgatggagctgtccttcagcgac
caccgcctcgagccccccaagtacaccgccgaggagtgcaaggaaaagggccacacctac
gccgccccgctctacgtcaccgccgagttcatcaaccacggcaccggtgaaatcaagagc
cagaccgtgttcatgggtgacttcccgctcatgaccgagcgcggcaccttcatcattaac
ggcaccgagcgcgtggtcgtttcccagctggtgcgttcccccggcgtctacttcgagcgc
tcctccgaccgcaccagcgacaaggacaccttctcctgcaaggtcatcccctctcgcggt
gcctggctggagttcgagatcgacaagcgcgacgccgtgggcgtgcgcatcgaccgcaag
cgcaagcagtccatcaccgtgttcctgcgcgccctgggcctgagcgagtccgagctgcgc
gagcagttcgccgactacccgctgctgctggccggcctggacaaggacgggtcgatgacc
caggaggaagcgctcctggacatctaccgcaagatccgcccgggtgagccgccgagcgtc
gaggccggtcgcgccctgctggagaactactacttcgcgcccaagcgctacgacctggcc
aaggttggtcgctacaagatcaacaagaagctgggcctggacgccccgctggacgaggcc
ctgctgcgccgcgaggacatcgtggccgccgtccgctacctgctggccctgcagaagggc
gaggagaccctgcccggccgccgtgggggccaggacgttgaaatcccggtggagcaggac
gacatcgaccacttcggtaaccgtcgcatccgcgccgtcggtgagctgatccagggccag
gtccgcaccggtctgtcccgcatggagcgcgtggtgcgcgagcgcatgaccaccaccgac
gcccaggcgatccagccgaccaccctgatcaacacccgccccgtgacggcagcgatcaag
gagttcttcggcacctcccagctgtcccagttcatggaccagaacaacccgctggccggt
ctgacgcacaagcgtcgtctgtccgcgctgggccccggtggtctgtcccgtgaccgcgcc
ggcatggaggtccgtgacgttcacccgtcgcactacggccgcatgtgccccatcgagacc
cctgaaggccccaacattggtctgatcggctcgctggccacctacgcccgcatcaacccc
ttcggcttcgttgagaccccctaccgcgtggtcaagaacggccaggtcaccgacgagacc
cgctacctgaccgcggacgacgaggaccgtcacgccatcgcccaggcatccgctccgctg
gacaggaacggccgcttcgtggagaagcaggcgctgtgccgtgtctccggtggcgagccg
gcgctggtggacgtcgaggacatcgactacatggacgtctccgcccgccagatggtgtcc
gtggccacctccatgattccgttcctggagcacgacgacgccaaccgcgcgctcatgggc
gccaacatgcagcgccaggccgtgccgctgctgcgccccgtctccccgctggtcggcacc
ggcatggaggcccgcgccgccgtggacgctggcgacgtgatcgtggtccgcaagggcggc
gccggcgtggtcaccgaggtctcggccgactacatctgcgtcatggaggactccggctcc
aaccacacctaccgcctggccaagttccgtcgctccaaccagggcaactgctacaaccag
cgcgtgaccgtggacgagggcgaccgcgtggaggagggccaggtcatcgccgatggcccc
gccaccgccggcggcgagctggccctgggccagaacctgctggtcgccttcatgtcctgg
gagggcttcaactacgaggatggcatcatcctctcccagcgcctggtcagcgaggacgtc
ctcacctcgatccacatcgaggagcacgagatcgacgcccgcgacaccaagctgggcccg
gaggagatcacccgcgacatccccaacgtgagcgaggagaccctggctcacctggacgag
cgcggcatcatccgcatcggtgccgaggtgggtgccggcgacatcctggtcggcaaggtc
accccgaagggtgagaccgagctgaccagcgaggagcgcctgctgcgcgccatcttcggt
gagaaggcccgcgaggtgcgcgacacctccctgcgcgtgccccacggcgagtccggcatc
gtcatcggcgtcaaggaggcgtccggcgacgacgacgagctgcccgcaggcgtgaaccag
cgcatcacggtctacatcgcccagcgtcgcaagatcaccgacggtgacaagctctccggt
cgccacggcaacaagggtgttatctccaagatcctgcccgtcgaggacatgccgttccta
gaggacggcaccccggttgacatcatcctcaacccgatgggtgtgcccggccgcatgaac
atcggccaggtgctggaggtccacctcggttggatcgcctcccagggctgggacgccacc
ggcgcgctggcgcaggccaaggagtgggcggccaagctgcccgccgacggcgttgccgcc
ccggccggcacccgcgtggccaccccggtgttcgacggcctggaggccgacgagctgacc
ggcctgctggactgcacgctgcccacccgcgacggcgaccgcctggtcggcgtcaacggc
aaggcgcgcctgttcgacggtcgctccggtgagcccttcccgttcccgatctccgtgggc
tacatgtacatcttgaagctgcaccacctggtggacgacaagattcacgcccgctccacc
ggcccgtactccatgatcacgcagcagccgctgggtggtaaggcccagttcggtggccag
cgcttcggtgagatggaggtgtgggccctggaggcatacggcgccgcctacgccctccag
gagctgctcacggtcaagtccgacgacgtcaccggccgtgtcaaggtctacgaggccatc
gtcaagggcgaggacatccccgacccgggcatcccggagtccttcaaggttctggtcaag
gaaatgcgctccctgtgcctgaacgtggaggccctggacgagcagggtaacgcgatcgag
ctgcgcgagaccgaggaggacgtgttccgcacctccgaggaactgggcatcgacctgggc
cgccgccccgacgcgcgcgacttcgaagagctctaa
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