Bufo gargarizans (Asiatic toad): 122926051
Help
Entry
122926051 CDS
T07965
Symbol
COL25A1
Name
(RefSeq) collagen alpha-1(XXV) chain
KO
K24356
collagen type XXV alpha
Organism
bgar
Bufo gargarizans (Asiatic toad)
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
bgar00536
]
122926051 (COL25A1)
Glycosaminoglycan binding proteins [BR:
bgar00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
122926051 (COL25A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
122926051
NCBI-ProteinID:
XP_044133373
LinkDB
All DBs
Position
1:226631066..227054132
Genome browser
AA seq
689 aa
AA seq
DB search
MLLKGDPKPASHQGWSREQPTDDASRSWSRTLPSVLALVLSLFSLASCVYLNVKTGDLEG
RTWALQHGKSGDIFHVPGLSVDQLNSIVQEKVDRLLSQRSYEHMAKIRISREAPAECNCP
AGPPGQRGKRGRRGEPGPPGQPGPQGPPGPKGDKGDQGDQGPRGLPGYPTMAALHSNQIL
TVKGDQGQAGPPGPPGPPGPPGPRGPPGDTGKDGPRGLSGVPGEPGIPGEQGLIGPMGPP
GQKGSDGEPGAPGLDGEKGDQGAPGLDGIQGMKHMFSFYRGEMGESGPTGGPGEKGDPGS
SAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFLGPPGEPGLPGLPGTKGERGEL
GPPGRGERGIQGVPGPKGETGEPGNRGPKGSKGDSGSSGDAGPTGPRGPPGQKGDQGATE
IIDYNGNIQEALQRITAITVTGPAGPPGPPGLPGSKGEGGPVGPPGIDGEQGPKGSKGDR
GETGISGEKGGIGLPGLPGANGMKGEKGDHGSPGPHGASIIGPPGPPGPHGPPGPMGPHG
VSGPKGEPGLNGLKGLRGEQGQKGDRGPLGLPGASGLDGKPGPRGTDGPLGPPGPAGPKG
DRGEKGVVGDPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDPGERGEKGEKGKKGKKGPKG
EKGEQGAPGLDAPCPLGPDGLPMPGCWQK
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgaagggagaccctaaacctgccagccaccagggatggagccgggagcagccc
acggacgatgcctccaggagctggagcaggactttgcccagtgtgctggccctggtgctt
tctctcttttccttggcatcctgcgtgtacctgaatgtaaagactggcgacctggagggc
aggacgtgggctctgcagcatggcaagtcaggggacatcttccatgtgcctggattatct
gtggaccagctgaactccatcgtgcaggagaaggtggaccggcttctgtcccagaggtca
tatgaacacatggcaaaaatacgaatctcaagagaagctccggcagagtgtaactgccca
gcaggtccacccggccaaagaggcaagagaggcagaagaggtgaaccaggacctcctggt
caaccaggaccacagggtcctcctggtccaaagggtgacaagggagatcaaggtgatcag
ggccctcggggtttgccaggctaccccacaatggccgctctccatagtaatcagatcctc
accgtcaagggtgatcaaggacaggctgggcccccaggcccaccagggcctcctggacca
ccaggtcccaggggtcccccaggtgacactggtaaagatggaccaagaggattatctgga
gtcccaggggaaccaggaattccaggtgaacaaggcttaattggtccaatggggcctcct
ggacaaaagggttctgacggagagcctggcgctccaggacttgacggcgagaagggggat
caaggtgcacctggtttagatggcattcaagggatgaagcatatgttttctttctatagg
ggtgagatgggggaaagcggtcctacaggtggaccaggagaaaagggtgacccaggatca
tctgctgctggcataaagggtgaacctggagaatcaggccgtccagggcaaaagggtgaa
ccaggactgcctgggctacctggacttcctgggataaagggggaaccaggatttctcggc
cctcctggagaacctggattgccaggcttaccagggacaaagggagaacgtggtgaactt
ggacctccaggaagaggagaaaggggtattcaaggagtaccaggtccaaagggagaaact
ggggaacctggaaatagaggcccaaaagggtcaaagggagattccggaagcagcggtgat
gcaggtcctactggtcccagaggacccccaggccaaaagggcgatcaaggagcaacggaa
atcatagattacaatggaaatattcaggaagcattgcagaggattactgccattacagtt
acgggacctgctggaccccctggacctcctggtttgcctggatcaaagggagagggaggc
cctgttggacctccaggaattgatggggagcaggggcctaaaggttctaaaggagatcgt
ggagaaactggcatttcaggagaaaaagggggaattggtctacctgggttgcctggtgca
aatggaatgaaaggtgaaaagggagaccatggttcacctggtcctcatggggcttctatc
ataggtcctcctggtccaccaggtcctcatgggcccccaggcccaatgggtccacatgga
gtttcaggtccaaagggtgaaccagggttaaatggtcttaaaggattgaggggtgagcaa
ggtcaaaagggtgacagaggaccactgggtcttccaggagcatctggcttagacggaaag
ccaggacccaggggtacagatgggccacttggtcctcccggtccagcaggtccaaaaggt
gacaggggagaaaaaggtgttgttggcgatccagggcctagaggaccgtatggtttacct
ggcaaggatggagaacctggtctagatggttttcctggtcctcgaggagagaaaggagac
ccaggagaaaggggagaaaagggggaaaagggaaaaaaaggcaaaaaagggcctaaaggg
gagaaaggagaacagggtgcccctggattagatgcaccttgcccgttgggaccagatgga
cttccaatgcccggctgctggcagaagtga
DBGET
integrated database retrieval system
