Bufo gargarizans (Asiatic toad): 122941569
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Entry
122941569 CDS
T07965
Symbol
COL9A3
Name
(RefSeq) collagen alpha-3(IX) chain isoform X1
KO
K08131
collagen type IX alpha
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar04510
Focal adhesion
bgar04512
ECM-receptor interaction
bgar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122941569 (COL9A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122941569 (COL9A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122941569 (COL9A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
bgar00535
]
122941569 (COL9A3)
Proteoglycans [BR:
bgar00535
]
Extracellular matrix (ECM) proteoglycans
Others
122941569 (COL9A3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
122941569
NCBI-ProteinID:
XP_044154836
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All DBs
Position
6:286640411..286684799
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AA seq
676 aa
AA seq
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MARFPTIGFLFIIHLVASQGQRIGPPGPPGPQGPPGTLGKDGIDGEVGPPGLPGRPGPKG
APGKPGEAGKPGLSGLPGIDGLTGPDGKPGPDGPPGERGNIGPPGPDGPAGRGPPGPPGL
AGPSGLPGGKGPQGPAGPSGPPGLPGPPGPPGPPGIPGVVPDSNGDLQCPAVCPPGPPGP
PGMPGFKGHTGHKGERGELGKDGQKGDAGPPGPAGIPGSVGLQGPRGARGLVGPQGPAGD
RGPNGFRGPPGPPGPPGKAGDQGVGGPQGYPGPKGDSGKAGPKGMPGGPGPIGEPGMPGK
DGRDGTSGLDGEKGDRGRPGVPGEKGPNGLPGLPGKAGTKGEKGQLGAHGELGEAGPSGE
PGIPGEAGPPGERGVAGPRGGSGGVGLPGPIGTPGVRGFQGPKGNIGDPGLPGPTGIRGG
FGERGPVGAAGPKGDQGIAGSDGLPGEKGEMGPFGPVGQKGEPGLRGEPGPKGISGPNGT
SGIPGIPGPPGPMGFQGEQGVPGITGKPGVPGRLSSEQHIRELCGGMINDQIAQLAANLR
RPLAPGLVGRPGPAGPPGPQGTPGRVGHPGSRGPPGYRGPTGDLGAPGFRGNQGDKGDKG
QGGRGIDGPFGDQGEQGAQGVPGTSRDGRDGAHGEPGYPGEPGRSGTVGAQGTPGICDTS
ACQGAVAAVKSGSKKS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggttcccaactattgggttcctttttataatccacctagtggcatcgcaaggg
cagagaattggaccaccaggacctccaggtccacagggaccccctggaacactgggcaag
gatggaatagatggtgaagtcggcccccctggtttacctggacgcccaggtccaaaagga
gcccctggaaaaccaggtgaagctggaaaaccaggactgtctggactgccaggtattgat
ggactgactggacctgatgggaaacctggccctgatggaccaccaggagaacggggaaac
attggaccacctgggcctgatggacctgcaggaagaggaccacctggacctcccggtctt
gctggaccaagtggtttaccaggcggtaaagggccccaaggtcctgcgggaccttctggc
ccacctggacttcctgggcctccaggaccaccaggccctccaggtattcctggagttgtt
cctgatagcaatggagacctccagtgtccagctgtttgcccaccaggacctcctggtccc
ccaggaatgccaggttttaagggacacacaggacacaaaggagaacgaggggaacttgga
aaagatggtcagaagggcgatgcgggtcctcctgggccagcgggaatccctggcagtgtg
ggcttacagggcccaagaggtgcaaggggcctagttggacctcagggacctgcaggagac
aggggacccaatggatttagaggaccccctggtcctccaggaccccctgggaaagctggg
gatcaaggcgtaggaggacctcagggatatcctggacctaaaggtgactctggaaaagct
ggtcccaaggggatgccaggtggtccaggtcccataggagagccaggaatgccagggaag
gatgggcgtgacgggacctctggcctggacggtgagaagggtgatcgtggaaggccagga
gttcctggtgagaaggggccaaatggactcccagggcttcctggcaaagctggaactaag
ggagagaaaggtcaactgggcgcccatggagaactaggagaagccggcccctctggagag
ccaggtattcccggtgaagctggacctccaggagaaagaggagtggctggacccagagga
ggatctggtggtgtcggtctcccaggaccaattggtactcccggagtgcgtggcttccag
ggcccaaaaggcaacattggtgaccccggcttacctggacctactggaatccgtggtgga
tttggagaacggggtcctgttggagctgctggccccaaaggcgaccagggcattgcgggt
tctgatggacttccaggtgaaaagggggagatggggccatttggaccagttggacagaaa
ggagagccaggactgagaggtgaacccggccccaaaggtatttctggaccgaatggaaca
tctggcataccaggaatccctggcccaccaggtccaatgggtttccaaggagaacaagga
gttcctggcatcacaggaaaacctggtgtccctggcaggctgtcaagtgagcagcatatc
cgggaattgtgcggtggaatgatcaatgatcaaattgcccagctagcagctaatttaaga
agacccttggctccagggttggtcggtcgaccaggacccgctgggccacccggacctcaa
ggtactcctggacgtgtaggacatcctggtagtcgtggacctccaggatacagagggcca
actggagatttgggagctccaggtttcagaggcaatcaaggtgacaaaggagacaaagga
caaggtggacgaggtattgatggaccatttggtgatcaaggagagcaaggtgcacaagga
gtacccggaacaagcagagatggtcgggatggtgctcatggtgagcctggttaccctggt
gagcctggaagatctggtacagtaggagctcaaggaactccaggaatatgtgacacatcc
gcttgccaaggtgcagttgctgcagtaaaatctggttccaaaaagtcataa
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