Bufo gargarizans (Asiatic toad): 122942548
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Entry
122942548 CDS
T07965
Symbol
TRIM8
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM8
KO
K12001
tripartite motif-containing protein 8 [EC:
2.3.2.27
]
Organism
bgar
Bufo gargarizans (Asiatic toad)
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bgar04121
]
122942548 (TRIM8)
Enzymes [BR:
bgar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122942548 (TRIM8)
Ubiquitin system [BR:
bgar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122942548 (TRIM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRIM_CC
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-B_box
zf-C3HC4_3
zf-RING_6
zf-RING_5
zf-RING_10
CASP_C
U-box
PAS-like
DUF3952
dCache_2
RNase_Y_N
Phasin
DUF4878
MG280
Motif
Other DBs
NCBI-GeneID:
122942548
NCBI-ProteinID:
XP_044156144
LinkDB
All DBs
Position
6:complement(326968192..327057135)
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AA seq
551 aa
AA seq
DB search
MAENWKNCFEEELICPICLHVFVEPVQLPCKHNFCRGCISEAWAKETGLVRCPECNQAYN
QKPNLEKNLKLTNIVEKFNSLNVDKPPSILHCVFCRRGPPLPAQKICLRCEAPCCQSHVQ
THLQQPSTARGHLLVEAEDVRAWSCPQHNAYRLYHCEAEQVAVCQFCCYYTGAHQGHSVC
DVEIRRNEIRKMLMKQQDRLEEREQDIEDQLYKLESDKRLVEEKVNQLKDEVRQQYERLH
QILDEDMRKTMDILDKAQAKFCNENAAQVLHLNERMQEAKKLLSSVQVMFDKTEDINFMK
NTKSVKILMDRTQTCTGGSLPPPKIGHLNSKLFLTEITKKEKQLRKMLEGPFSTPVPFLQ
SIPMYSCNVSSSAGEKRKHSAAFPESSFLDSTPGTVSGQYISQGSSTGEGQSAQPMVPCS
STQHIVGLPSGPQPVHSNSVFNPSHYPNSSSSQQSVLSQYGGRKILVCSVDNCYCSSVSN
HSGHQPYPRSGHFPWTVSSQEYSHPLPPTPSVTQSLPGLAVREWIDATQQHGRQDFYRVY
GQPATKHYVTS
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaattggaaaaactgtttcgaagaagagctgatatgtcctatatgtctgcat
gtgtttgttgaacccgttcagcttccgtgtaagcacaatttttgccgaggttgtataagt
gaggcctgggcgaaagagacaggcctggtgaggtgccctgagtgcaaccaggcctataat
caaaagcctaacctcgaaaagaaccttaagctcaccaacatcgtggaaaaatttaattct
cttaacgtggacaagccaccgtctatcctgcactgtgtattctgtcgaaggggtccaccg
ctgcctgcccagaagatctgcttgagatgtgaagcgccgtgctgccagtcccatgtccag
actcacctacagcaaccttctactgctcgtgggcacctcctggtagaagccgaagacgtt
agggcctggagttgtccacaacacaatgcttaccgactgtaccactgtgaagcggagcag
gtggcagtgtgccagttctgctgctactataccggtgcccaccaaggacattcagtatgc
gatgtggagatacgtagaaatgagatcagaaaaatgctcatgaaacagcaagatcgcttg
gaggagcgggaacaagatatagaggatcagctgtacaaactggaatctgacaagagatta
gtggaggaaaaagttaaccagctgaaagatgaggtccggcaacagtacgagagactgcac
caaattttggatgaagacatgagaaaaacgatggatattttggataaggctcaagccaag
ttctgtaacgagaatgcagcccaggttctgcacctgaacgaacgtatgcaagaagccaaa
aagctcctgagctctgtgcaggtcatgttcgacaaaacagaggacattaacttcatgaag
aatacaaagtctgtgaaaatcctgatggacaggactcagacctgcactggaggaagcctt
ccaccaccgaaaataggacatctgaactccaaactcttcctgacagagattacgaagaag
gagaaacagctgaggaaaatgctggaaggcccgttcagcacccctgtgccattcctccag
agcattcctatgtattcctgcaatgtaagcagttcagcgggagagaagcgcaaacattca
gctgcatttcctgaaagcagtttccttgattcaacccctggaactgttagtggccagtac
ataagccagggttcttccactggtgagggtcagtcggcacaacccatggtgccttgcagc
tctacccagcatattgtaggacttcctagcggcccacagcctgtccactccaattctgtc
ttcaatccttcccattacccaaacagttcgtcatctcagcaatctgtcctctcccagtat
ggggggcgcaagatcctggtgtgctctgtggacaactgttattgctcttcagtgtctaac
cacagtggccaccaaccatatccaagatctggccactttccatggacagtctcttcccaa
gaatactctcatcctcttccacccaccccttccgtaacacagtctcttccaggactcgct
gtcagagaatggattgatgctacccagcaacatggccgtcaagatttctatagggtctat
gggcagcccgccacaaagcactacgtcaccagttaa
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