Bufo gargarizans (Asiatic toad): 122944469
Help
Entry
122944469 CDS
T07965
Symbol
SF3B1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122944469 (SF3B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bgar03041
]
122944469 (SF3B1)
03036 Chromosome and associated proteins [BR:
bgar03036
]
122944469 (SF3B1)
Spliceosome [BR:
bgar03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
122944469 (SF3B1)
Complex B
122944469 (SF3B1)
Complex C
U2 SnRNP specific factors
122944469 (SF3B1)
Chromosome and associated proteins [BR:
bgar03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
122944469 (SF3B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
TPR_DNAAF5
HEAT_EF3_N
HEAT_MROH2B_C
HEAT_ECM29
TPR_IPO5
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
VPS15-like_hel
Adaptin_N
Phage_T7_Gp15
UNC45-central
TALPID3
Motif
Other DBs
NCBI-GeneID:
122944469
NCBI-ProteinID:
XP_044158712
LinkDB
All DBs
Position
8:111821861..111991895
Genome browser
AA seq
1303 aa
AA seq
DB search
MAKIAKTHEDIEAQIREIQGKKATLDETQGVGLDSTGYFDQEIYGGSDSRFTGYVTSIAA
NEQEDDDDDTTASFGQKKPGYHAPVALLNDIPQSAEQYDPFAEHRPQKIADREDEYKKYR
RTMIISPERLDPFADGGKTPDPKTNARTYTDVMREKQLIKEHREIHQQLAEKAKSGDLKV
VNGSSAAASQPPSKRKRRWDQTDQTPGSTPKKISSWDQAEVTPGHTPSLRWDETPGRTKG
SDTPGATPGSKIWDPTPSHTPAGAATPGRGDTPGHATPGHGGAASSARKNRWDETPKTER
DTPGHGSGWAETPRTDRGGESVGETPTPGASKRKSRWDETPASQMGGSTPVLTPGKTPIG
TPAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAGY
VPIRTPARKLTATPTPLGGLTGFHMPIEDRTMKSVSDQPSGNLPFLKPDDIQYFDKLLVD
VDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMS
PTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLA
KAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQAR
HTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPYGI
ESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSPD
EEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVELA
NKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAFQ
EQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAVV
MKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRLT
PILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNTF
GYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPEL
NVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVYG
FGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARKV
RDVYWKIYNSIYIGSQDALIAHYPRIYNDEKNTYIRYELDYIL
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcgctaaaacacacgaagacattgaagcacagatacgtgaaattcaagga
aagaaagccactctagatgaaacgcaaggagtcgggcttgattcaactggttatttcgat
caagaaatttatggtggaagtgacagcagatttactggttatgttacatctatagcagca
aatgagcaagaagatgatgatgatgatactacagcttcatttgggcagaagaaaccaggc
tatcatgctcccgttgctttattgaatgacattcctcagtcagctgaacagtatgatcca
tttgctgaacacaggccacagaagattgcagaccgagaagatgaatataaaaagtacaga
agaacaatgattatatctccagagcggcttgacccttttgcagatggtggcaagactcct
gatccaaaaacaaatgctcggacgtacactgatgttatgcgagaaaagcaactgattaag
gagcatcgtgaaatccatcaacagcttgcagaaaaggctaaatctggtgatttaaaagtg
gtcaatggatcttctgcagcggcatctcaaccaccttcaaaacgcaagcgacgatgggat
cagacagaccaaaccccagggtcaactccaaagaagatttccagctgggaccaagccgag
gtcactcctgggcacactccgtcactacgatgggatgagactccaggccgtactaaagga
agtgatactcctggagctacacctggatcgaaaatttgggatcctactccaagtcatact
cctgctggagctgcaacccctggtcgtggagatactccagggcatgcaacacctggccat
ggaggagcagcatccagtgcacgtaaaaatagatgggatgaaactcctaaaacagaacgt
gatacccctggacatggcagtggttgggctgagactccgcgtacagatcgtggtggtgaa
tctgttggtgaaacccctacacctggagcaagtaaaagaaagtctcgttgggatgaaaca
ccagctagtcagatgggaggtagcactcctgtcttgactccagggaaaacaccaattggc
acacctgcaatgaatatggcaactccaactccaggacatatcatgagcatgactcctgaa
caacttcaggcatggcggtgggaacgtgaaattgatgaaagaaaccgaccactctccgat
gaagagctggatgctatgtttccagagggttataaggttcttcctccacctgctggttat
gttcccatacgcacaccagccaggaaattgactgcgacacccactcctttaggtggattg
actggatttcatatgcctattgaagacagaaccatgaaaagcgtcagtgatcagccttct
ggcaaccttccattcttaaaacctgatgatattcagtactttgataaacttctggttgat
gtagatgaatctacacttagtcctgaagagcagaaagagagaaaaattatgaagttgctg
ctgaaaataaagaatgggacacctccaatgaggaaagcagccttacgacaaattacagac
aaagcccgtgaatttggagctgggccactctttaatcaaattcttcctctgctgatgtcg
ccaactcttgaagaccaagaacgacatttgttagtcaaagttattgacagaattttgtac
aagctggatgacttggttagaccatatgtgcataagatacttgtcgttattgaaccattg
ctcattgatgaagactattatgctagagtagaagggagagaaattatatctaacttggct
aaggctgctggcttggccacaatgatttccacaatgagaccagatatagacaatatggat
gaatatgtccgtaatacaactgccagagcttttgcagttgttgcctctgctcttggcatt
ccttcattgcttcctttcttgaaagctgtctgtaaaagtaagaagtcatggcaagcacga
catactgggattaaaattgtgcaacaaattgcaattctgatgggatgtgccattttgcca
cacctaagaagtttggtggagattattgagcatggattggtggatgagcaacaaaaagtt
cgtacaattagtgctttggctattgcagctttagcggaagcagccactccctatgggatt
gagtcctttgattccgtgctgaagcctctgtggaaaggtattcgacagcacagaggaaag
ggtcttgctgcattcttaaaggcgattggatatcttattcctctcatggatgcggagtat
gcaaactactataccagagaagtgatgttgattttaatcagagaattccaatcccctgat
gaagagatgaagaaaatagttcttaaggttgttaagcagtgctgtggtactgatggtgtt
gaagcaaattacataaagacagaaattcttcctccgtttttcaagcacttctggcagcat
agaatggctctggacagaagaaactacagacagttagtggacacaacggttgaacttgca
aataaagtgggtgctgcagaaataatttctagaattgttgatgacttaaaagatgaagca
gaacaatacagaaaaatggtcatggaaactattgagaaaattatgggaaatcttggagct
gcagatattgaccataagttagaagagcagttgattgatggaattctttatgcattccag
gagcagactacagaagactctgtgatgttgaatggttttggcacagttgtcaatgctctt
ggcaaaagagtaaaaccatatctgccccagatatgtggtacagtcttgtggcgcttgaac
aacaagtctgcaaaagtgaggcaacaggccgcagatttaatctctcgtactgcagttgtc
atgaaaacttgtcaagaggaaaaattaatgggtcatttaggtgtggttttgtatgaatat
cttggagaggaatatcctgaagtacttggcagcattttaggagccctgaaagcaattgtt
aatgttataggtatgcacaaaatgactcctccgataaaagatttactgccgagacttaca
cccattttgaaaaacaggcatgaaaaagtgcaggagaattgcattgatttggttggtcgc
attgctgatcggggagcagaatatgtatctgcaagagaatggatgaggatttgttttgaa
ttgttggagttgctgaaggctcataagaaagcgatcagaagagccactgttaacactttc
ggctacattgctaaagctattgggccacatgatgttcttgcaacacttttaaataactta
aaagtacaagaaagacaaaacagagtatgtaccacagtggctattgctattgtggctgaa
acatgctcaccttttactgtgcttcctgcactgatgaatgaatacagagtgccagaattg
aatgtccaaaatggtgtgttaaagtctctctccttcctttttgagtatattggagaaatg
ggaaaggattatatctatgctgtaacacccttacttgaagatgccttgatggacagagat
cttgtgcataggcaaacagcaagtgcagttgttcagcacatgtcactaggtgtatatgga
tttggatgtgaagattctttgaaccatttgttaaattatgtatggcctaatgtatttgaa
acctctcctcatgtaatccaagctgtcatgggagcacttgaaggtcttagagttgctatt
ggaccatgcaggatgctgcagtattgcttacagggtcttttccatcctgccagaaaagtt
agagatgtttattggaaaatatacaattcaatatatattggatcacaagatgctctcatt
gctcattatcctcgtatctacaatgatgaaaagaacacttacattcgttatgagcttgat
tatatcttataa
DBGET
integrated database retrieval system
