Blastomyces gilchristii: BDBG_01972
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Entry
BDBG_01972 CDS
T06540
Name
(RefSeq) translation repressor/antiviral protein Ski3
KO
K12600
superkiller protein 3
Organism
bgh
Blastomyces gilchristii
Pathway
bgh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BDBG_01972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgh03019
]
BDBG_01972
Messenger RNA biogenesis [BR:
bgh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
BDBG_01972
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_8
TPR_1
TPR_19
TPR_22
TPR_16
TPR_17
TPR_14
TPR_CcmH_CycH
TPR_12
TPR_11
TPR_6
ARM_TT21_5th
TPR_7
ARM_TT21_N
TPR_Slam
TPR_9
T7SS_EccA1_N
ANAPC3
Coatomer_E
TPPII_C
Eplus_motif
Motif
Other DBs
NCBI-GeneID:
8510322
NCBI-ProteinID:
XP_002627301
UniProt:
A0A179UC65
LinkDB
All DBs
Position
Unknown
AA seq
1414 aa
AA seq
DB search
MSVKGALKSIRTCLDSEDFEQAAGKAKELCDKDPQNYHAHVFLGLALDKLNNFEGAEASY
LAATAIKDDDRTAWQGLLTLYEKKDGKYLDQYRKAVTRLCQILAAADDKARCQSAVQKYA
TLARKHGSKAQYKQALELQLPSSFLYDILEGTVPHPAHTYLRIIEICEAEEKEFINREIG
ERRTRLGARIDQVTLEVRREAFQRSNLDSLYREMINWSNDDEVRRNYEERLIQRAYDFLQ
VLPPTKKNPKREEVLRLAREMVIIKHPFLLSWKIVLEWQDADDLSGMDLNLLNDFIELFP
EDGLSKVLKGFLRSDISPFPKELESDEPKEDGAHKESSEASHQINPEDSLLLMAEGLEQS
PDSILAHRIMGQLYLSLDEFQTAVDVARKGIEVITEVQRFTGLKLRNVTDAVNITLATAL
ITYQSPKNHPEAKQIFEEMLNRRPKSTSCLLGIGLILEEDQDYATAVDFLEQALERDPTN
LKIRSELFWCKAHNGALELGLYGLRETLDMMESGRTRNQDLRAEILYRIGYCQWELDPSP
VARKDRTKAYASFLGSIQSNMNYAPAYSSLGVYYEDYKKDRKRARRCFHKAFEISPAEVD
SAERLARDFANQGAWDLVEAISQRVVDSGRAKPTPGSKRQGYSWPYAALGVVEINRQQYT
KSIVAFQSALRISPHHYQSWVGLAESYHNSGRFIAATKAFEHAETLETTLPVSEREQTWF
AKYMLANVKRELGEYEDAITRYEAVLNLKPDELGVSIALLQTLTENAWKCVTSGLFGEAA
ECARKAIENGISIAQFHPDVFNLWKSIADAFSIFSWIRGKASFMPITEYRKLIESQTDMG
CFELLADEDGVRTDFVSLLTKSDSEEVLSPNVCMHAAILAQKRAVSISTSDKHAQAISWY
NLGWAEYRAYTCLEDGAKSKRNKPFLKAAMRCFKRAIELEAGNSEFWNALGVVTTSLSPK
VAQHSFVRSLHLNERSPQVWTNLGVLYILHNDHELANEAFTRAQSADPDFAHAWLGQGLL
ALLFGDVKEARELFTHAFELGNSALTLPKRQYAVSVFDHLISDSMMHVDIQQLIQPLFAL
HQLHTQSPSDLPLQHLSALLAERMGSFADSNSSLENVCSGMESEYESSESTSSLARFAQA
KSDAARVHLAQMEYDAAVDSAETALSLSSDGGIEEFDPLVNQKLRLSSHLAAGLAYYYLK
DMDRAIDMFRDALQEADSSPDAVCLLAQVLWAKGGEEEREAARVQLLDCIEKHPTHVGAV
TLLGVIALLDADVDSIEAVELDLQEMRTSDDVGIHDRVKVTKLLASIAKLGHVKNPDVSQ
ELRQSQEANTSIMLAPYQPQGWATLAAASSEPYPAEMALHTALQNIPPKGTLDAAELAKY
YTLTGRRDAAARAIMIAPWIPDGWKELPHCISAE
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtaaagggggctcttaagtctatccgcacttgtttggattctgaagattttgag
caggctgcggggaaggcaaaggagttatgtgataaggatccccagaactatcatgcgcac
gtttttctcggacttgcgcttgataaattgaataattttgaaggggcggaggcttcatac
ctagcggcaactgcaattaaggacgatgatagaacagcttggcagggtctgctcacactg
tacgagaagaaagatggcaaatatttagaccagtatcgcaaagcggtgacaaggctatgt
cagatactagctgcagccgacgacaaagctaggtgtcaatctgccgtccagaaatatgcc
acactggctaggaaacacggttccaaggcacaatacaagcaggctttggagcttcaactc
ccctctagttttctttatgatatccttgagggcacagttcctcatcccgctcatacgtac
cttcgtatcatagaaatatgcgaagcagaggagaaggagtttatcaacagagaaattggc
gaaaggcggactaggctgggcgcccggattgaccaggtgaccctcgaagtgagacgtgaa
gccttccagcgtagcaacctggacagcctttaccgtgaaatgattaactggtctaatgat
gatgaggttcgccggaactatgaggagaggttaatacagcgagcttatgactttcttcaa
gttctcccccctaccaaaaaaaatccaaagcgtgaggaggtcctgcgtcttgctcgggaa
atggtcataatcaagcacccgtttttactttcctggaaaattgttttggaatggcaagat
gcagatgatctctcggggatggatttaaacttgctaaatgatttcatagagctatttccc
gaagacggattaagcaaagtacttaaggggtttctccgaagcgatatatcaccgttccct
aaagaactcgagtcggacgaaccgaaggaagacggtgcgcataaagagtcaagcgaagcc
agtcaccaaatcaaccctgaggatagcttgctactgatggcggaggggttggagcaaagt
ccagattcaatccttgcgcacaggattatggggcagctttatttgtctctggatgagttc
cagactgccgttgacgtcgctcgcaaaggtatagaagtgattacggaagtacagcgattt
acaggactaaaactgcgtaatgtcactgacgctgtgaatattactctcgctaccgctctc
attacataccaatcaccaaaaaatcacccagaggcaaagcagatatttgaagagatgtta
aatcgcaggccgaaatctaccagctgccttctcgggatcggtctgatcctagaagaagat
caggattatgccaccgctgtggacttccttgagcaggcgttggagcgcgaccccactaat
cttaagataagaagtgaactgttctggtgtaaagcacataatggagcactcgaactaggg
ctatatggtctacgggaaactttagacatgatggaatcgggtcgtacgcggaatcaagac
ctcagagcggagatattgtaccggatcgggtactgccaatgggagttagatccgtcaccc
gtagcccggaaagaccgcaccaaagcctacgccagttttctcggctccatacagtcgaat
atgaattacgcacccgcatatagtagcttgggggtgtactatgaggactacaagaaggac
cggaagcgagcgcgccggtgtttccataaggctttcgagatttcacctgcagaggtagat
tctgcggaacgtctagctagggattttgcaaaccaaggggcgtgggacctcgttgaagcg
atatcacaaagagtggtggattcgggaagggcgaaacctactccgggctcgaaacggcaa
ggctatagttggccatatgccgctctgggtgtggtggaaataaacagacaacaatatacg
aaaagcatagtagcgttccaatcggcattgcgaatatctccgcatcattaccaatcctgg
gtcgggctggctgaaagctatcacaattccggccgttttatcgcagctaccaaggcgttt
gagcatgcggagacattggagaccaccctcccggtatctgaaagggaacaaacttggttc
gcaaagtacatgcttgcaaatgtgaaacgggaacttggagaatacgaggatgctattacg
agatatgaagcagttttgaacttaaagccagacgagctcggagtctcgatcgcactcttg
caaaccctcactgaaaatgcatggaagtgcgtcacgtcaggtttgttcggggaagctgct
gaatgtgcaaggaaggctattgaaaatggaatatcaattgcacagttccaccctgacgtg
ttcaacctttggaagtcaattgcggatgccttttccatcttctcttggattcgagggaag
gcatcctttatgcctatcactgaatacaggaagctaattgagagtcaaactgatatggga
tgctttgaattacttgcagacgaggatggtgtgaggacagactttgtatcactcctcacg
aagtcggattctgaagaagttttatcaccaaacgtatgcatgcacgctgcaattcttgct
caaaaacgcgctgtgtccatatctacaagtgacaaacacgctcaagcaatatcctggtat
aaccttggatgggcagaatatcgcgcatatacttgcttggaggatggggcgaaatcgaaa
agaaacaaacccttcctcaaagcagcgatgcggtgtttcaaacgagcaatcgaactcgaa
gctggtaattccgagttctggaatgcacttggagttgttacaacgtccctaagtccgaaa
gtcgctcaacattcgtttgtccgaagccttcatctaaacgaaagaagtcctcaggtatgg
acgaatttaggtgtattgtacattcttcacaacgaccatgagcttgcaaacgaggcattt
acaagggcacagtcagcggatccagattttgctcatgcttggcttggacagggcctcctt
gctctgctttttggagacgtaaaggaagccagagagctctttacgcacgcctttgaacta
ggaaattcagcgttaacgctcccgaaaaggcagtatgcagtctccgtcttcgaccatctt
atctccgactctatgatgcatgttgatattcaacaactcatacaaccccttttcgccctc
caccaactccatacccaatcgccttccgatcttccattgcaacatctttcagctctcctg
gctgaaaggatgggcagttttgcagactccaattctagcctggaaaatgtgtgttctggt
atggaatcagaatacgaaagttcagagtcgacctcgtcattagctcggtttgcccaggca
aaatcagatgccgcccgagtgcatctggctcagatggaatacgacgcggccgttgacagc
gcagaaactgctctaagtctatcatctgacggcggcatagaagagtttgaccctctagtc
aaccaaaagctacgactttcgtcacatcttgcggcgggactagcctattattacctcaag
gatatggatagggcaatcgacatgttccgtgatgctctgcaagaagctgacagttcaccg
gatgcggtatgcttattggctcaagtcctatgggccaaaggcggagaggaggaacgagaa
gccgctcgagttcagcttttggactgcatcgaaaagcatcctacacatgttggcgccgta
acgctcttgggtgtcatagctctgctggatgctgacgtggattcaatcgaggcagtcgag
ttagacttgcaagagatgcgaacaagtgacgatgttggcatacatgaccgcgtgaaggtt
acaaagcttctggcaagcattgccaagcttggacatgtgaaaaatcctgatgtctcgcaa
gagttaaggcagagccaggaagctaacacgtctataatgcttgccccctatcaaccacaa
gggtgggctacactggcagcggcgtcatcggagccatatccggctgaaatggcgctacac
acggcattgcagaacatcccgccaaagggaacgcttgatgcagcagagctggctaagtac
tacaccctcactggccgtcgggacgctgccgcaagagcaataatgatagcgccttggata
ccggatggttggaaggaacttcctcattgcatatcggcggagtaa
DBGET
integrated database retrieval system
