KEGG   Alkalicoccobacillus gibsonii: BGM20_03075
Entry
BGM20_03075       CDS       T04820                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
bgi  Alkalicoccobacillus gibsonii
Pathway
bgi02024  Quorum sensing
bgi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bgi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BGM20_03075
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BGM20_03075
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bgi03019]
    BGM20_03075
   03036 Chromosome and associated proteins [BR:bgi03036]
    BGM20_03075
Messenger RNA biogenesis [BR:bgi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     BGM20_03075
Chromosome and associated proteins [BR:bgi03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    BGM20_03075
SSDB
Motif
Pfam: Hfq Hfq_1 LSM
Other DBs
NCBI-ProteinID: AOL29671
LinkDB
Position
631749..631970
AA seq 73 aa
MKPINIQDQFLNQIRKENTYVTVFLLNGFQLRGQVKGFDNFTVLLESEGKQQLIYKHAIS
TFAPQKNVQLELE
NT seq 222 nt   +upstreamnt  +downstreamnt
atgaaaccgattaatattcaggatcagtttttgaatcaaatccggaaagaaaatacgtat
gtcactgtttttttgctgaacggctttcagttgcggggccaggtgaaaggctttgataac
tttaccgtattgttggaatcggaaggtaagcagcagcttatatataaacatgcgatctca
acgtttgcgccgcaaaaaaacgtccagcttgaactcgaatag

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