Bordetella genomosp. 13: CAL15_19620
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Entry
CAL15_19620 CDS
T05441
Name
(GenBank) hydroxyacid dehydrogenase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bgm
Bordetella genomosp. 13
Pathway
bgm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bgm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CAL15_19620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgm03400
]
CAL15_19620
Enzymes [BR:
bgm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CAL15_19620
DNA repair and recombination proteins [BR:
bgm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CAL15_19620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ARP96385
UniProt:
A0A1W6ZGK1
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All DBs
Position
complement(4361747..4362457)
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AA seq
236 aa
AA seq
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MSVASRPKREARGAAPEGRAVRGPVRSGHDGEPVALPVEPADVDPRQQPASLDECRRCGL
WKNATQGVGGQGRRAPIMLVGEQPGDKEDLAGLPFVGPAGELLDAALEEAGIPRDEVYIT
NAVKHFKWEPRGKRRMHKTPGQREVLACRYWLDDELQRIGPRVVVALGATALGAVMPGKK
VPLTPNLGKALPAAGHTVVATYHPSYALRTPDRESRRLAFEAIVQALKLARRLERD
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtggcaagccgccccaagcgcgaggcccgcggtgcggcgcccgaaggccgcgcc
gtgcgcggtccggtccggtccggccacgatggcgagcccgtcgcgctgcccgtggagccc
gccgacgtggacccgcggcaacagccggcctcgctggacgagtgccgccgctgcggcctc
tggaagaacgcgacccagggcgtgggcgggcaaggccgccgcgcgcccatcatgctggtg
ggggagcagcccggcgacaaggaggatctggccggcctgccgttcgtcggtcccgccggc
gagctgctggatgccgcgctggaggaagccggcattccgcgcgacgaggtgtatatcacc
aacgcggtgaagcacttcaagtgggagccccgcggcaagcggcgcatgcacaagacgccg
ggacaacgcgaggtgctggcttgccgctactggctggatgacgagctgcagcgcatcggc
ccgcgcgtggtggtggcgctgggcgccaccgcattgggcgccgtgatgcccggcaagaag
gtgcccctgacgcccaatctgggcaaggccttgccggcggcgggccataccgtggtcgcc
acgtatcacccgtcctacgcgctgcgcacgccggaccgcgagtcgcggcgcctggccttc
gaggccatcgtgcaggcgctgaagctggcgcgccgcctggagcgggactga
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