KEGG   Bordetella genomosp. 13: CAL15_19670
Entry
CAL15_19670       CDS       T05441                                 
Name
(GenBank) pectate lyase
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
bgm  Bordetella genomosp. 13
Pathway
bgm00040  Pentose and glucuronate interconversions
bgm01100  Metabolic pathways
bgm02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:bgm00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    CAL15_19670
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CAL15_19670
Enzymes [BR:bgm01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     CAL15_19670
SSDB
Motif
Pfam: Pectate_lyase_4
Other DBs
NCBI-ProteinID: ARP96393
UniProt: A0A1W6ZG56
LinkDB
Position
complement(4372945..4374231)
AA seq 428 aa
MCGRRIDPREDRGRRDGSAGLSRAVGLRFGVGIPSLLLAAALLLHGRAAVAEEPCKVADE
HCPFVSSLLQQREGYGEKTVGGLGGRVVEVTSDKDSGPGTLRDAVKRARKEPTWIRFASD
MTIVLASQIRVPSNITIDGRGKKVTLIDDGLGIYGSRNVIVTHLTIDGRLSRLTQAVNVA
NGSRDVWVHHLDLSRFSDRLLNVKNGSTDVTVSWTKFHDSNKVMLLNNITSADLFKNYER
DSIARVTLHHNYFLNTVQRNPRGQFGTFHLYGNLLENWDLYGMSFSLEARALIEGNMFSN
VSQRECTEPESTPTVHGIDVNYCRFIPGAPARSALRNGESDRRHYEKSKARHGYTRDYKA
FLRLKDNLYLGEAKPVLEDYRPDSVPAPPYCYGYEPPTAEVAQKIRRLAGNTVGEAPKAM
PRIGSACH
NT seq 1287 nt   +upstreamnt  +downstreamnt
atgtgcggccggcggatcgatccgcgcgaggatagaggacgacgtgatgggagtgcggga
ttgagcagagcggtcggattgcggttcggtgtgggaatcccgtcgttgctgctcgcagcg
gcgctgctgctccatggccgggccgctgtcgcggaggagccctgcaaggtcgcggacgaa
cactgcccattcgtctcgtcgctgctgcagcaacgcgaaggctacggagagaagaccgtc
ggcggcctcggcgggcgcgtcgtcgaggtgacttccgacaaggactcgggccccggtacg
ctgcgcgatgcggtcaagcgcgccaggaaggagcccacctggatccgcttcgcttccgac
atgaccatcgtgctggcctcgcagatccgcgtgccgtccaacatcaccatcgacggccgc
ggaaagaaagtcaccttgatcgatgacgggctggggatatacggcagcaggaacgtcatc
gtcacgcacctgacgatagacgggcgcctcagccgccttacgcaggccgtgaacgtggcc
aatggcagccgcgacgtgtgggtgcaccacctcgatctgtcgcgattctcagatcggctg
ctcaacgtgaagaatggctccacggacgtcacggtgtcatggaccaagttccatgattcg
aacaaggtgatgctgctcaacaacatcacttcggccgatcttttcaagaactatgagcgc
gactctatcgcccgcgtgacgctgcaccacaactatttcctgaacacggtgcagcgcaat
cccaggggccagttcggcacgttccacctgtacggcaatctgctcgagaactgggacctg
tatggcatgagcttcagcctcgaggcccgtgcgttgatcgaggggaacatgttcagcaac
gtgtcccagcgggagtgcacggagcccgagtccacgccgacggttcacggcatcgacgtg
aactattgccgcttcatccccggcgcgccggcgagaagcgcgctgcgcaacggcgaatcc
gaccggcggcattacgagaaatcgaaggcccggcatgggtatacgcgcgattacaaggcc
ttcctgcgcctgaaggacaatctgtaccttggcgaggcgaaacccgtgctcgaggactac
cgtcccgattcggtgccggcgcctccgtattgctatggctacgagccgccgacggcggag
gtggcgcagaagatccgccggctggccggcaatacggttggcgaggcgccgaaggccatg
ccgcgtatcggatcggcgtgccattag

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