Burkholderia gladioli ATCC 10248: BM43_238
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Entry
BM43_238 CDS
T03826
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bgo
Burkholderia gladioli ATCC 10248
Pathway
bgo03410
Base excision repair
bgo03430
Mismatch repair
bgo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BM43_238 (recJ)
03430 Mismatch repair
BM43_238 (recJ)
03440 Homologous recombination
BM43_238 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgo03400
]
BM43_238 (recJ)
DNA repair and recombination proteins [BR:
bgo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BM43_238 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BM43_238 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BM43_238 (recJ)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Glyco_transf_4
HTH_3
Motif
Other DBs
NCBI-ProteinID:
AJX00276
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All DBs
Position
1:262565..264259
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AA seq
564 aa
AA seq
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MTRLVTRQASPADAEALARHGLHPVLARLYAARGVTCPEDIETALARLVPPASLKGCEDA
AVLLADALAARKRMLVVADYDCDGATACAVAVRGLRMLGASIDYLVPNRFEYGYGLTPEI
VKLAAARRPELLITVDNGIASVDGVAAANALGIDVLVTDHHLPGATLPAARAIVNPNQPG
CEFPSKHIAGVGVMFYVLLALRAELRRRGAFDDARPEPRLDGLLDLVALGTVADVVRLDG
NNRVLVAQGLQRIRKGRMQPGIAALFRAAAREARSASAFDLGFGLGPRLNAAGRLSDMSL
GIECLTTDDIGRAWELAQQLDTMNRERREIEAGMQQQALADLAQVDPAEAATITLFNPDW
HQGVIGIVAGRLKEKFHRPSFTFAHADESGARVKGSGRSIPGFHLRDALDLVSKREPDLL
VTFGGHAMAAGVTLETDKVPRFAAAFEAVAREWLSEEALSRVLETDGDLEDAYFTPQFVE
LLDGAVWGQGFPAPLFSGEFEVASQALVKDKHLKLQLARGRQRFGAIWFNHTEPLPAHAT
VAYRLASDTWNGVTRVQLIVEHAA
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgacccgactcgtcacccgccaagcctcccccgccgacgccgaggcgctcgcccgccac
ggcctgcatcccgtcctcgcgcgcctgtatgccgcgcgcggcgtcacctgccccgaggac
atcgagaccgccctggcgcggctcgtgccgcccgccagcctgaagggctgcgaggacgcg
gcggtgctgctggccgacgcgctggcggcgcgcaagcgcatgctggtggtggccgactac
gactgcgacggcgccaccgcctgcgcggtggcggtgcgcggcctgcgcatgctcggcgcc
tcgatcgactacctggtgccgaaccgcttcgaatacggctacggcctcacgcccgagatc
gtcaagctggccgccgcgcgccggccagaactgttgatcacggtcgacaacggcatcgcc
agcgtcgacggcgtggccgccgccaacgcgctcggcatcgacgtgctggtcaccgaccac
cacctgcccggcgcgacgctgcccgcggcgcgcgccatcgtcaacccgaaccagcccggc
tgcgaattcccgagcaagcacatcgccggggtcggcgtgatgttctatgtgctgctggcg
ctgcgcgccgagctgcgccgccgcggcgccttcgacgatgcccggcccgagccgcgcctg
gacgggctgctcgatctggtcgcgctgggcacggtggccgacgtggtgcgcctggacggc
aacaaccgcgtgctggtcgcgcagggcctgcagcgcatccggaagggccgcatgcagccc
ggcatcgccgcgctgtttcgcgccgccgcgcgcgaggcccgctcggcctcggccttcgat
ctcggcttcggcctgggcccgcgcctgaacgcggcgggccgcctgtccgacatgtcgctc
ggcatcgaatgcctgaccaccgacgacatcggccgcgcctgggagctggcccagcagctc
gacaccatgaatcgcgagcgccgcgagatcgaggccggcatgcagcagcaggcactggcc
gacctggcccaggtcgatccggccgaggcggccaccatcacgctgttcaaccccgactgg
caccagggcgtgatcggtatcgtcgcgggccggctcaaggagaagttccaccgcccctcg
ttcaccttcgcgcacgccgacgagagcggcgcgcgcgtcaagggctcgggccgctcgatc
cccggcttccacctgcgcgacgcgctggacctggtctccaagcgcgaaccggacctgctg
gtgaccttcggcggccacgcgatggccgccggcgtcacgctcgagaccgacaaggtgccg
cgcttcgccgccgccttcgaggcggtggcgcgcgaatggctgtccgaggaggcgctctcg
cgcgtgctggagaccgacggcgatctcgaggatgcctatttcacgccgcagttcgtcgaa
ctgctcgatggcgcggtctggggccagggtttccctgcgccgctgttctcgggcgagttc
gaggtggcctcgcaggcgctggtcaaggacaagcacctgaagctgcagctcgcgcgcggc
cgccagcgcttcggcgcgatctggttcaaccacaccgagccgctgccggcgcacgccacc
gtcgcctaccgcctcgccagcgacacctggaacggcgtgacgcgcgtgcaactgatcgtc
gagcacgcggcctga
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