Bradyrhizobium guangdongense: X265_22890
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Entry
X265_22890 CDS
T05902
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bgq
Bradyrhizobium guangdongense
Pathway
bgq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bgq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
X265_22890 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bgq03021
]
X265_22890 (rpoB)
03400 DNA repair and recombination proteins [BR:
bgq03400
]
X265_22890 (rpoB)
Enzymes [BR:
bgq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
X265_22890 (rpoB)
Transcription machinery [BR:
bgq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
X265_22890 (rpoB)
DNA repair and recombination proteins [BR:
bgq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
X265_22890 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
QAU40201
UniProt:
A0A410V927
LinkDB
All DBs
Position
complement(4736953..4741077)
Genome browser
AA seq
1374 aa
AA seq
DB search
MAQQTFTGRKRVRKFFGHIKEVAEMPNLIEVQKASYDQFLMVDEPQGGRLDEGLQAVFRS
VFPISDFSGTSMLEFVRYEFEQPKYDVDECRQRGMTFAAPLKVTLRLIVFDIDEETGAKS
VKDIKEQDVYMGDIPLMTMNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLFA
ARVIPYRGSWLDIEFDAKDIVYARIDRRRKIPVTSLMFALGLDGEAILSTFYKKILYKRT
KEGWRVPFDANRFRGYSTINDLIDADTGKVVLEAGKKLTVRAARQLQEKGLKALRLSDEE
LVGNYLAEDLVNPKTGEIHAEAGEEITDKSLKVLNEHGYKELPLLDIDHVNVGAYIRNTL
AADKNMTREDALFDIYRVMRPGEPPTLDSAQAMFQSLFFDAERYDLSAVGRVKMNMRLDL
DAPDTQRTLRKEDILCVIKTLVDLRDGKGEIDDIDHLGNRRVRSVGELMENQYRIGLLRM
ERAIKERMSSVDIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRLS
ALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFVETPY
RKVKDGRVTDEVVYLSAMEEGRYSVAQANVPVDAKGRFTEDLVVCRASGTRDVVPLTPDK
VDYMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRAEAPFVGTGMEGVVA
RDSGAAIAARRSGVIDQIDATRVVIRATEDLDPTKSGVDIYRLMKYQRSNQSTCINQRPL
VKVGDIVKKGDIIADGPSTDLGELALGRNVLVAFMPWNGYNFEDSILLSERIVKEDVFTS
IHIEEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVRAGDILVGKITPK
GESPMTPEEKLLRAIFGEKASDVRDTSLRVPPGVQGTIVEVRVFNRHGVDKDERALAIER
EEIERLAKDRDDEQAILDRNVYNRLAELLEGRQGIAGPKGFKKDTKITRAVLEEYPKSQW
WLFASPNDKLMAEIEAMRKQYDESKKGLEQRFLDKVEKLQRGDELPPGVMKMVKVFVAVK
RKIQPGDKMAGRHGNKGVVSKIVPIEDMPFLEDGTHADIVLNPLGVPSRMNVGQILETHL
GWACAGLGKRIGQTVDAYLSKQDIKPLKETLKKVYGEDETIKTLNDNELLELGHNLSRGV
PIATPVFDGAKETDIEEMLKLAGLDASGQSTVYDGRTGDAFDRKVTVGYIYMLKLHHLVD
DKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAG
RTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLNVDLHNSKMGPAPTSEAAE
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagacattcaccggtcgcaaacgcgttcgcaagttcttcggacacatcaag
gaagttgccgagatgccgaacctcatcgaggttcagaaggcgtcctatgaccagttcctg
atggtcgacgaaccccagggcgggcgcctcgacgagggcctgcaggctgtgttccggtcc
gtgttcccgatctccgacttctcgggcacctcgatgctggaattcgtccgctacgagttc
gagcagccgaaatacgacgtcgacgagtgccgtcagcgcggcatgaccttcgcggccccg
ctcaaggtgacgctgcgcctcatcgtgttcgatatcgacgaggaaaccggcgcgaagtcg
gtcaaggacatcaaggagcaggacgtctacatgggcgacatcccgctcatgacgatgaac
ggcaccttcatcgtaaacggcaccgagcgcgtcatcgtctcgcagatgcaccgttcgccg
ggcgtgttcttcgaccacgacaagggcaagacccattcctcgggcaagctgctgttcgcc
gcccgcgtgatcccgtatcgcggctcctggctcgacatcgagttcgacgccaaggacatc
gtctatgcgcgtatcgaccgtcgccgcaagattccggtgacgtcgctgatgttcgccctc
ggcctcgacggcgaggcgatcctgtccacgttctacaagaagatcctctacaagcggacc
aaggaaggctggcgcgttccgttcgacgccaaccgcttccgcggctactcgaccatcaac
gacctgatcgatgccgacaccggcaaggtggtgctcgaggccggcaagaagctcaccgtc
cgtgccgcccgccagctccaggagaaggggctcaaggcgctgcgcctgtcggacgaggag
ctcgtcggcaactacctcgccgaggacctcgtcaacccgaagaccggtgagatccacgcc
gaagccggtgaggaaatcaccgacaagtcgctcaaggtgctcaacgagcacggttacaag
gaactgccgctgctcgacatcgaccacgtcaatgtcggcgcctatatccgcaacacgctc
gcggccgacaagaacatgacgcgtgaggacgcgctgttcgacatctaccgcgtgatgcgt
ccgggcgagccgccgacgctggattcggcgcaggcgatgttccagtcgctgttcttcgat
gccgagcgttacgacctctccgcggtcggccgcgtcaagatgaacatgcgcctcgacctc
gatgcgcccgacacccagcgtacgctgcgcaaggaagacatcctttgcgtcatcaagacg
ctggtggatctgcgcgacggcaagggcgagatcgacgacatcgaccatctcggcaaccgc
cgcgtgcgctcggtcggcgagctcatggagaaccaataccgcatcggcctcctgcgcatg
gagcgcgcgatcaaggagcgcatgtcctcggtcgacatcgacacggtcatgccgcaggac
ctgatcaacgccaagccggcggcggctgccgtgcgcgagttcttcggctcctcgcagctc
tcgcagttcatggaccagaccaatcctctgtcggagatcacccacaagcgccgtctctcg
gcacttggaccgggcggtctgacccgcgagcgcgccggcttcgaagtgcgcgacgtgcat
ccgacgcattacggccgcatctgcccgatcgagacgccggaaggtccgaacatcggcctg
atcaactcgctcgccaccttcgcgcgggtgaacaagtacggcttcgtcgagacgccgtat
cgcaaggtcaaggacggtcgcgttaccgacgaggtcgtgtacctctcggcgatggaagag
ggccgctactcggtcgcgcaggccaacgtgcctgtcgacgccaagggccgcttcaccgaa
gacctcgtggtctgccgcgccagcggcacccgcgacgtcgtgccgctgacgcccgacaag
gtcgactacatggacgtatcgccgaagcagctcgtttcggtcgccgcagccctgatcccg
ttcctcgagaacgacgacgccaaccgcgcgctgatgggctcgaacatgcagcgccaggcg
gtgccgctggttcgcgccgaagcgccgttcgtcggcaccggcatggaaggtgtagttgcg
cgtgactcgggtgctgcgatcgcggcacgccgttcgggcgtgatcgaccagatcgacgcg
acccgcgtcgtcatccgcgccaccgaagatctcgatccgaccaagtcgggcgtcgatatc
tatcggttgatgaagtaccagcgctccaaccagtcgacctgcatcaaccagcgtccgctg
gtgaaggtcggcgacatcgtcaagaagggcgacatcatcgccgacggtccgtcgaccgat
ctcggcgagctcgcgctcggccgcaacgtgctcgtcgcgttcatgccgtggaacggctac
aacttcgaagactcgatcctgctctccgagcggatcgtgaaggaggacgtcttcacctcg
atccacatcgaggagttcgaggtgatggcccgcgacaccaagctcggccctgaggaaatc
acccgcgacatcccgaacgtttcggaagaagcgctgaagaacctcgacgaagccggtatc
gtctacatcggcgctgaagtgcgggccggcgacatcctggtcggcaagatcacgccgaag
ggcgaaagcccgatgacgccggaagagaagcttctgcgcgccatcttcggcgagaaggcc
tccgacgttcgcgacacctcgctgcgcgttcccccgggcgtgcagggcacgatcgtggaa
gtccgcgtgttcaaccgccacggcgtcgacaaggacgagcgtgcgctggcgatcgagcgg
gaagagatcgagcgtctggccaaggaccgagacgacgaacaggcgatcctggaccgcaac
gtctacaaccgtcttgccgagctcctcgaggggcggcagggcattgcaggtcccaagggc
ttcaagaaggacaccaagatcacccgtgcggtgctcgaggagtacccgaagtcgcagtgg
tggctgttcgcttcgcccaacgacaagctgatggccgagatcgaggccatgcggaagcag
tacgacgagtcgaagaaggggctcgagcagcgcttcctcgacaaggtcgagaagctccag
cgtggtgacgagcttccgcccggcgtgatgaagatggtcaaggtcttcgtcgcggtgaag
cgcaagatccagcccggcgacaagatggccggccgtcacggcaacaagggcgtggtgtcg
aagatcgtgccgatcgaggacatgccgttcctcgaggacggcacgcacgccgacatcgtg
ctcaatccgctgggcgtgccctcgcgcatgaacgtcggacagatcctcgagacccatctc
ggctgggcctgcgccggcctcggcaagcgcatcggccagacggtcgatgcctatttgtcg
aagcaggacatcaagccgctgaaggaaaccttgaagaaggtctatggcgaggacgagacg
atcaagacgctcaacgacaacgagctgcttgaactcggccacaacttaagccgcggcgtg
ccgatcgcgacgccggtgttcgatggtgccaaggagaccgacatcgaggagatgctgaag
ctcgcgggtctcgacgcgtccggccagtcgaccgtctatgacggccgcaccggcgatgcc
ttcgatcgcaaggtgacggtgggctacatctacatgctcaagctgcaccatctggtcgac
gacaagatccacgcgcgttcgatcggtccgtactcgctcgtcacccagcagccgctgggc
ggcaaggcgcagttcggcggccagcgtttcggcgaaatggaggtgtgggcgctcgaagct
tacggcgcggcctacacgctccaggaaatgctgaccgtgaagtcggacgacgtcgccggc
cgtaccaaggtgtacgaggcgatcgtgcgcggcgacgacaccttcgaggccggcattccg
gaatcgttcaacgtgctggtcaaggaaatgcgctcgctcggcctcaacgtcgatctgcac
aattccaagatgggaccggcgccgacgtcggaagcggccgagtaa
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integrated database retrieval system
