Borreliella garinii SZ: X921_02355
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Entry
X921_02355 CDS
T03259
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bgs
Borreliella garinii SZ
Pathway
bgs03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bgs00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
X921_02355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bgs03021
]
X921_02355
03400 DNA repair and recombination proteins [BR:
bgs03400
]
X921_02355
Enzymes [BR:
bgs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
X921_02355
Transcription machinery [BR:
bgs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
X921_02355
DNA repair and recombination proteins [BR:
bgs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
X921_02355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
AHZ74155
LinkDB
All DBs
Position
496586..500053
Genome browser
AA seq
1155 aa
AA seq
DB search
MIKRVHLGQGRADEILDLPNLIEIQLNSYEKFLQLDKLKNKKPLLNEGLESVFRNIFPIK
SGNGDVALEYERYYIENDALNFTEKECKRKGQSYEAVLKVRLNLQFLTTGEIRQKDVYMG
TIPLMTERGTFIINGAERVVVSQIHRSPGVVFYKEKDLYSARIIPYRGSWLEFEIDSKKD
YLYVKIDRKKRILITLFLRALGFDTREKIIETFYNIKKIKVEDGTKRDLPGQYLAKSINI
RENMYYRAGDKITLQDVEDFLQNGVNEIELVDFDGYDALSGKCFVSSNVILNCLEKEDAF
FALKDGSKELPKESVMLAVYGALFPGEPISIDNAENDLKTIFFSERRYDLGRVGRYKLSK
KFGFDDLSTSVLTMDDIVNTISHLLRIYEGHDILDDIDHLGNRRVRSVGELLTNIYKGAM
SRVEKIAKDRMSNKEVFNLKPQELISVKPIVSAVKEFFATSQLSQFMDQVNPLAELTHKR
RLNALGPGGLSRDRAGFEVRDVHYTHYGRMCPIETPEGPNIGLIVSLATYSRVNDYGFLE
TPYRKVVNGEVTDELEYLSAIDEEKKCIAQANAAFNSNGKYLEDLVSVRISGDYTTTNPK
NIDYMDVSPRQLISVSSALIPFLEHNDANRALMGSNMQRQAVPLLFPKPPIVGTGMESVV
AKDSGVVVKAKRSGEVILATSNKIVVKPFESENAKDLDEYHIVKYERTNQDTCFNQSVLV
KEGQKVGRGEIIADGPATRYGELALGNNLLLGVIPWNGFNYEDAILISDRIVKEDLYTSI
HIKEFSIEVRETKLGPEKVTGDIPNVSEKILNKLDENGIIRIGTYVKPGDILVGKVTPKS
EGDITPEFRLLTSIFGEKAKDVKNNSLKVPHGTEGTVIDVQRITKEDVGNLSPGVEEILK
VYVAKKRKLKEGDKMAGRHGNKGVVAKILPVEDMPYLADGTPLDICLNPLGVPSRMNIGQ
LMESQLGLAGKYLGESYNVPVFESATNEQIQEKLKKAGFNPTSKEILYDGYTGEPFENEV
MVGVIYMLKLHHLVDDKMHARSTGPYSLVSQQPLGGKAQFGGQRLGEMEVWALEAYGAAH
TLQELLTVKSDDMSGRVKIYENIVKGVPTNVSGIPESFNVLMQELRGLGLDLSIYDDNGN
QVPLTEKEEELINKG
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaagagttcatctgggacaaggaagagctgatgagattttagacttacctaac
ctgatagaaatacaattaaattcttatgaaaaatttttacaacttgataaattaaaaaat
aaaaaacctttacttaatgaaggccttgagtctgtttttagaaatatatttcccatcaaa
agtggaaatggtgatgttgctcttgagtatgaaaggtactatatagaaaacgatgccctt
aattttacagaaaaagaatgtaaaagaaagggtcaaagctatgaagctgttttaaaagta
agactaaatttacaatttttgactactggagaaataaggcaaaaagacgtttacatggga
actattcctttaatgacagaaaggggaacttttattattaatggggccgagagggttgtt
gtttctcaaattcatagatccccaggagttgttttttataaagaaaaagatttgtattct
gccagaataattccttatcgtggttcttggttagaatttgagattgattctaaaaaagat
tatctttatgtaaagatagatagaaaaaaaaggatactcataactctttttttaagagct
ttaggatttgatacgagagaaaaaataatagaaactttttataacattaaaaaaattaaa
gttgaagacggtacaaaaagagatcttccaggtcaatatttagctaagagcattaacata
agagagaatatgtattatcgagcaggagataagattactctacaagatgttgaagatttt
ttgcaaaatggagtaaacgaaatagagcttgttgattttgatggttatgatgctctttct
ggaaagtgctttgtgagttcaaatgttattttaaattgtcttgagaaagaggatgccttt
tttgccttaaaggatggctctaaagagcttccaaaagaatcagttatgcttgctgtttat
ggtgctctttttcctggtgaaccaatatcgattgataatgctgaaaatgatttaaaaacc
atattcttttctgaaagaagatatgatcttgggcgtgtggggcgctataaactttctaaa
aaatttggatttgacgatttaagtacatcggttttaactatggatgatattgtcaacacc
atatctcatcttttaagaatatatgaaggtcatgatattcttgatgatattgatcatttg
ggaaatagaagggtgcgttctgttggggagcttcttactaatatatataaaggcgcgatg
tcaagagttgaaaaaattgctaaagatagaatgtctaataaggaagtttttaatctaaag
ccccaagagttaataagcgttaaacctattgtatctgctgttaaagaattttttgcaacc
agccagctttcgcagttcatggatcaggtcaatcctttggccgaacttacccacaaaagg
cgtcttaatgcccttggaccagggggactttcaagagatagagcaggatttgaggtaaga
gatgtccattatactcattatggcagaatgtgtcctattgaaactcctgaaggaccaaat
attggacttattgtttctttggctacttattcgagagttaatgattatggttttttggaa
actccctataggaaagttgttaatggagaagtgactgacgaattagaatatttatctgct
attgatgaagagaaaaagtgtattgcgcaggccaatgccgcctttaattctaatggaaag
tatcttgaagatttagtttctgttagaatttctggtgattatactacaacaaaccctaaa
aatatagactatatggatgtttcccctagacagctaatttcagtatcttcggcattaatt
ccttttcttgagcacaatgatgcaaatcgagctcttatgggttctaatatgcaaagacaa
gcagtacccctgcttttccctaaacctccaattgttggcacagggatggaaagtgttgtt
gcaaaggattcaggagtagtagttaaggctaaaagaagtggggaagttattcttgcaaca
agtaataaaatagttgttaagccttttgaatcagaaaatgctaaagatttagatgaatat
catattgttaagtatgaaaggacaaatcaagacacttgctttaatcaatccgttttagtt
aaagagggccaaaaggttggaaggggagagataatagctgatggccctgctactagatat
ggagagcttgctcttggtaataatttattactaggggttattccttggaatgggtttaat
tatgaggatgctatattaatatctgatagaattgtaaaggaagatctttatacatctatt
catattaaagaattcagcatagaggtaagagaaactaaacttggtcctgagaaggttaca
ggagatataccgaatgttagcgagaagatactaaacaaattagatgaaaatgggattata
cggataggaacctatgtgaagcccggtgatattttggttggcaaagttactccaaagtca
gaaggagacattactcctgaatttaggcttttaacttccatttttggagaaaaagcaaaa
gatgttaaaaataattctttaaaagttcctcatggtaccgaaggtacagttattgatgtt
caaaggattactaaagaggatgttggcaatctttctcctggggttgaggagatacttaaa
gtttatgttgctaaaaaaaggaagcttaaagagggcgataaaatggctggacgacatggt
aataaaggtgttgttgcaaaaattcttcctgttgaagacatgccttatcttgcagacgga
acccctcttgacatatgcttaaatcctttaggagttccatctaggatgaatattggacag
ttaatggaatcgcaattaggccttgctggtaaatatcttggtgaatcttataatgttcct
gtttttgagtctgccacaaatgaacaaattcaagaaaaattgaaaaaagctggatttaat
ccaacttctaaagaaattttatatgatggttatacaggagagccgtttgaaaatgaagta
atggttggggtgatttacatgcttaaactgcatcaccttgttgatgataaaatgcatgca
agatcaacaggaccatattctcttgtttctcaacaacctcttggaggaaaagctcaattt
ggtgggcaaagacttggagaaatggaggtttgggcccttgaggcttatggtgcggctcac
actcttcaagaacttttaacagttaaatctgatgatatgtcgggtagagtcaagatatat
gaaaatatagtaaaaggcgttcccactaatgtatcaggtattcctgagtcttttaatgtg
ctaatgcaagagcttagagggcttggacttgatttgtcaatttacgatgacaatgggaat
caagtccctttgacagaaaaagaagaagaattgattaataaaggctag
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