Biomphalaria glabrata (bloodfluke planorb): 106060279
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Entry
106060279 CDS
T07368
Name
(RefSeq) collagen alpha-2(IX) chain-like isoform X1
KO
K08131
collagen type IX alpha
Organism
bgt
Biomphalaria glabrata (bloodfluke planorb)
Pathway
bgt04512
ECM-receptor interaction
bgt04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bgt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106060279
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106060279
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
bgt00535
]
106060279
Proteoglycans [BR:
bgt00535
]
Extracellular matrix (ECM) proteoglycans
Others
106060279
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
106060279
NCBI-ProteinID:
XP_013073553
UniProt:
A0A2C9KD15
LinkDB
All DBs
AA seq
1013 aa
AA seq
DB search
MRRHWCVQVCVYLAAAVNLVISQLTVSENGQVCPEIRPGEDDLPGFDFISNFGLDGRREI
PGVEQVEGSNKFQKAYRINENSRLRIRTTDLFPKGLPEQYSFVSTFRMLNQTRTKRWSLF
QIRDFLGKPQFGVLLDGTKKTVEFHFLTLNGRLERLVFNKKASKLFNQKWHKLHFSVTRD
SVEMYIDCQPISGQPLPPRRQIDINGDISMGVNEQTGRTTPFELQWMQLDCDHTKPDREK
CDELPKNRTSTTTADPGRPRPPPIRPVTTPGPRPGSGTDPQKEGTCEVTCPRGPPGFNGT
AGPPGLPGPKGDAGTPGEAGRPGEPGRIGERGLPGRPGTDGTKGEPGQSGRPGSPGTAGQ
PGSPGIPGVPGVPGEKGTPGDTGPRGLPGPPGSSSATIKGDAGTPGAVGPRGPQGEQGIR
GLPGTVGPPGIPGEKGDRGPSGPKGSSGTDGRVGSQGPPGPPGPPGPAGPQGTPGRGDID
DNRIPQVQGPPGPMGLPGVAGPIGPKGQKGEPGERGLQGNKGERGETGTTGKPGKDGSPG
QEGQAGRRGAPGEKGEPGIQGVVGPTGPTGNPGIQGIKGSKGESGFKGDKGDPGTPGPPG
APAVLSTNTGTGVNGTVIVQQLQGLPGPPGEPGTKGTPGYPGNPGPPGERGPAGNPGTPG
LPGKPGNMGLPGYKGDPGSPGMKGPQGPEGKQGIMGLPGIQGHEGLKGQPGSRGPEGPRG
APGVEGRAGKPGPSGPQGPVGPVGPMGMTGPPGPPGPPGEKGSTNYIPAQVIEGDSRGPM
GQMGPPGNQGQQGMPGERGPMGKPGIAGPQGVPGVPGLPGSPGAAGERGLRGQTGMPGMP
GQPGRSISENEVRELCYKVLREQFEDLTAGLLGPPGPPGQGRPGKNGRPGPPGAPGERGP
PGPPGERGFLGLHGLPGPAGPPGPEGQRGPMGEKGEAGEAIIGPPGSHGPPGPPGSTGEG
TQGRPGERGLPGLPGSHGHRGPPGPPGPPGYCEFCNYGLQQFPPQTRNNVKGP
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgagacgacattggtgtgttcaagtctgtgtgtacctagcagctgctgtcaacctagtc
atttcacaattgacagtctcagagaatggtcaagtatgtccagaaataagaccaggagaa
gatgacctcccaggttttgactttatatcaaactttggattagatggtcgtcgagaaatt
ccaggagtggaacaagtggaagggagcaacaagttccagaaagcttacaggatcaatgag
aacagcagattacggatccgcaccacagatctcttcccaaaaggtcttcctgaacagtat
tcttttgtcagcacctttagaatgttaaaccaaaccagaaccaagcgatggagtctgttt
caaataagagattttcttgggaagcctcagtttggagttcttctagacggcacaaagaaa
actgtggaattccattttcttacattgaatgggcgattagaaagacttgttttcaataaa
aaagcgagcaagctcttcaaccagaagtggcataaacttcacttcagtgtgacgcgagac
agtgtggagatgtacattgactgccagcccatctctggtcagccgctgcccccaagaaga
cagattgacatcaacggagatataagcatgggtgtaaacgagcagactggacgcacaact
ccgttcgagcttcagtggatgcagttagactgtgaccatacaaagccagacagagagaaa
tgtgatgagctgcctaaaaatcgtacaagtaccaccacagcagatccaggaaggcctagg
ccacccccaatcaggcccgtcaccacaccaggtccacgcccaggtagtggcacagaccca
cagaaagaaggaacgtgtgaggtcacgtgtccaagagggccacctggatttaatggaaca
gcaggtccaccaggattaccaggaccaaaaggggatgctgggacaccaggagaagcagga
agaccaggagaacctggacgtattggtgagcgtggtcttccaggcagaccggggactgac
ggcacaaagggagaaccaggtcaaagtggacgccctggttcaccaggcactgcaggacaa
ccgggtagtccgggcattccaggagtaccaggtgtaccaggggaaaagggtactccaggt
gacacgggcccacgtggtttaccagggccaccaggatcgtcaagtgcaactatcaaggga
gatgccggaacaccaggtgccgtgggtccacgaggtccacagggtgaacagggaattcgt
ggcttgcctggtacagttggtccacctggaattccaggtgaaaaaggagacaggggtccc
tctggtcctaaaggctcttctggcacagacggcagagtgggatctcaaggacctcccgga
cctccaggaccacctggcccagcaggcccgcaaggaacaccaggacgaggtgacattgat
gataaccgcatcccccaagtacaaggtccaccaggtcctatgggcttaccaggagtagcc
ggtcctattggaccaaagggacaaaagggcgagcctggtgaaagaggtctacaaggaaat
aagggagagaggggagagacaggtaccactggtaaacctggaaaggatggctccccaggt
caggaaggtcaggctggcagacgaggagcacctggtgaaaaaggagaaccaggtatccaa
ggtgtagttggccctactggacccacaggcaatcctggcatacagggcatcaagggatct
aaaggagagtcagggttcaaaggtgacaaaggagatccgggaacacctggacctcccgga
gcaccagctgtgctcagcaccaacaccggtacaggggtaaacggcacagtcattgtccag
cagctgcaaggcctacccggtcctccaggagaaccaggcacaaaaggaactccaggttat
ccaggaaatccaggcccaccaggagaacgaggtccggccggaaatccgggtactccgggt
ttacctgggaaacctggcaacatgggcttacctggctacaaaggtgaccccggaagtcca
ggtatgaaaggacctcaaggacctgaaggcaagcaaggcattatgggattacctggcata
caaggacatgaaggactaaagggccagccaggcagccgaggtccagaaggtcccagaggt
gctcctggtgttgaaggcagggcgggaaaaccaggtccttcaggacctcagggtccagtt
ggaccagttggaccaatgggtatgactggaccgccgggaccgccgggaccaccaggtgaa
aaagggtccacgaactatatccctgcacaagtgatcgaaggagactccaggggaccaatg
ggtcagatgggtccaccaggaaaccaaggacaacagggcatgcccggagaacgaggcccg
atgggaaaacccggaatagctggaccacaaggggtgcccggtgtaccgggattaccgggc
tcacctggtgctgcaggagaaagaggattacgtggacagaccggcatgcctggtatgccc
ggacaacctggtcgcagtatatcagaaaacgaagtgagagaattatgttataaagtgctc
agagaacaattcgaagatttgacagcaggtttactaggcccaccgggaccaccgggccaa
ggtcggccaggtaaaaacggtcgtccaggacctccaggtgctccaggtgaacgtggcccc
cctgggccccctggagaacgaggttttcttgggttacatggtttgccggggcccgcgggc
ccacccggccctgaaggtcaacgtggaccaatgggtgagaagggagaggcgggagaagca
ataattggaccaccaggatcacatggcccaccaggaccaccaggttctacaggagaaggc
acacaagggagacctggagagaggggtctacccggactaccaggcagccacggacataga
ggacccccaggccctcccggaccaccaggctactgtgagttctgcaattacggcctgcag
cagttccctccccagacgagaaacaatgtcaagggtccttga
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