Benincasa hispida (wax gourd): 120074417
Help
Entry
120074417 CDS
T07258
Name
(RefSeq) valine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120074417
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bhj01007
]
120074417
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bhj03016
]
120074417
Enzymes [BR:
bhj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
120074417
Amino acid related enzymes [BR:
bhj01007
]
Aminoacyl-tRNA synthetase
Class I (U)
120074417
Transfer RNA biogenesis [BR:
bhj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
120074417
Prokaryotic type
120074417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
120074417
NCBI-ProteinID:
XP_038883468
LinkDB
All DBs
Position
1:43155008..43177958
Genome browser
AA seq
969 aa
AA seq
DB search
MLLQMAFSGPSLLHPSSACRLNPLLFTRHRPSFGLSRFHFRRLQQRQLAVATSANGVFTS
PEIAKTFDFASEERIYKWWESQGYFRPHFDQDTIPFVISMPPPNVTGSLHMGHAMFVTLE
DIMVRYNRMKGRPTLWLPGTDHAGIATQLVVERMLASEGIKRVELGRDEFTKRVWEWKEK
YGGTITNQIKRLGASCDWTKEHFTLDDQLSRAVIEAFVRLHERGLIYQGSYMVNWSPNLQ
TAVSDLEVEYSEEAGTLYHIKYRVAGGSRSDYLTVATTRPETLFGDVAIAVHPEDDRYSK
YVGMMAIVPMTYGRHVPIIPDKNVDKDFGTGVLKISPGHDHNDYLLARKLGLPILNVMNK
DGTLNKVAGLYCGLDRFEARKKLWADLEETGLAVKREAHTLRVPRSQRGGEIIEPLVSKQ
WFVTMEPLAEKALRAVEKGDLTIIPERFEKIYNHWLSNIKDWCISRQLWWGHRIPVWYIV
GKNPEEDYIVARNADEALEQAQKKCGKDVQIYQDSDVLDTWFSSALWPFSTLGWPDETAE
DFKRFYPTTMLETGHDILFFWVARMVMMGIEFTGTVPFSYIYLHGLIRDSQGRKMSKTLG
NVIDPLDTIKEFGTDALRFTLALGTAGQDLNLSTERLTSNKAFTNKLWNAGKFILQNLPK
QNDLQSWDSILSFEFEKDDCLLKLPLPECWIVSELHSLVDVVTTNYDKFFFGDVGRDIYN
FFWGDFADWYIEASKARLYQSGGNSVALAQAVLLYVFENILKLLHPFMPFVTEELWQALP
DRKEALIVSRWPQISLPRQASAIKKFENLKLLTKAIRNARAEYSVEPAKRISASIVASEE
VNQYISEEKEVLALLTRLDLHNVHFANSPPGNVDQSVHLVAGEGLEAYLPLADMVDISAE
VQRLSKRLTKMKTEYDGFVARLNSSSFVEKAPEDIVRGVREKAEEAKEKIALTEKRLSLL
RSTVPVPDC
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgcttcttcaaatggccttctctggtccttccctcctccatccttcctctgcttgcaga
ctcaatcccctactctttaccaggcaccggccttcttttggcctctcccgcttccatttc
cgtcgtctacagcagagacaattagctgttgccacatcagcgaatggagtttttacttct
ccagagatagcaaaaacgtttgactttgcttcggaagagcgaatatacaaatggtgggaa
tctcaaggttattttaggccacattttgatcaagataccattccgtttgtgatttcaatg
ccacctcccaatgtcacaggatcgctgcacatgggacatgcgatgtttgtgactctcgag
gatattatggttagatacaaccgtatgaagggaagaccaacactctggcttcccggaact
gatcatgcaggtattgccacacagttggttgttgaaagaatgcttgcgtctgaaggaata
aaaagggttgaattgggtagagatgaatttacaaagcgagtttgggaatggaaagagaag
tatggtggaactatcactaatcaaattaagagacttggagcttcctgtgattggactaaa
gagcactttacacttgatgaccagctaagtcgagccgttattgaggcatttgttcggctt
cacgagagaggcttgatctatcaaggttcttacatggtaaactggtctccgaatttgcaa
actgctgtttctgacctggaagtagagtactctgaagaagctggtactctctatcatatt
aaatatcgagtggctggaggttcaaggagtgattacttgacagtagcaacaactcgtcct
gaaaccttgtttggtgatgtagctatagcagtgcatcctgaggacgaccgttattcgaaa
tatgttggcatgatggcaattgttccaatgacgtatggtcgtcatgtccctataatccct
gacaagaatgttgataaggactttggaactggtgtgctaaagataagccccggtcatgat
cataatgactacctgcttgctcgaaaacttggtctccctatacttaatgtgatgaacaag
gacggaactcttaataaggttgctggactttactgtggtttagatcggtttgaagcacgg
aagaaactgtgggcagatttggaggagacaggactagctgtaaaaagggaagcacacacc
ttacgggtaccaagatcccaacgtggaggagaaataattgaacctttagttagtaaacag
tggtttgtgaccatggagccattggctgaaaaagcccttcgtgctgttgaaaaaggagat
ttgacaattatccccgagagatttgagaagatttacaatcattggctgtcaaatattaag
gactggtgtataagcaggcaactatggtggggacatcgcataccagtttggtacattgtg
ggaaaaaatccagaagaagactacatagttgctaggaatgctgacgaggctcttgagcaa
gctcagaagaaatgtgggaaggatgtacaaatataccaagattcagacgtacttgacacc
tggttctcaagtgcgttatggccttttagtactcttggatggccagatgagacagcagag
gattttaagcggttctatccaacgacaatgcttgaaacagggcatgatatactattcttt
tgggtggcaaggatggtcatgatgggaattgaatttactggcactgttccattttcatat
atttatctccatggactcattcgggactctcagggacggaaaatgtctaaaacactggga
aatgtgatagatccacttgatacaattaaagaatttggcactgatgctttacgattcaca
cttgctttaggaactgctggtcaggaccttaatctatcaaccgagaggctgacttccaat
aaggcattcactaataaattatggaatgccggaaagttcatattgcagaatttaccgaag
cagaatgatttgcaatcttgggattccatactgagttttgagtttgagaaagatgattgt
ctgctcaagttacctttaccagaatgctggattgtctcagaacttcattccctagtagac
gtggtcaccactaactatgataaatttttctttggagatgttggcagggatatatataac
tttttctggggtgattttgcagattggtacattgaagccagtaaagctcgcctttatcaa
tctggaggcaattcagttgctttggcacaagctgtgctgttgtacgtttttgaaaatatt
ctcaaattactacatcctttcatgccgtttgtgacagaggaactttggcaggcacttccc
gatcgtaaagaagctttaattgtatctcgttggccacaaatttcacttccaaggcaagcc
agtgcaattaagaaatttgagaacctaaaattgttgacaaaagcgattaggaatgctaga
gcagagtattcagttgagccagcaaagcgtatatctgcttctatagttgcaagtgaagag
gtcaatcaatatatatctgaagagaaggaagttttagctcttcttactcgtctggatcta
cacaatgttcattttgcaaattctcctccaggaaatgtagatcaatctgtgcatcttgta
gctggtgaagggctagaggcttatctacctcttgctgatatggttgatatctctgccgaa
gtccaacgcttatcaaagcgccttacaaaaatgaaaacagagtatgatggttttgtagct
cggcttaattcttcaagcttcgtagagaaagctcccgaggatatcgtccgtggggtaaga
gaaaaggctgaagaagcaaaagagaagatcgctctcaccgagaagcgcctctctctcctc
agatcaactgttccagttcctgattgttga
DBGET
integrated database retrieval system
