Benincasa hispida (wax gourd): 120075177
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Entry
120075177 CDS
T07258
Name
(RefSeq) probable pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj00040
Pentose and glucuronate interconversions
bhj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120075177
Enzymes [BR:
bhj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120075177
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
120075177
NCBI-ProteinID:
XP_038884299
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Position
4:33216534..33223948
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AA seq
498 aa
AA seq
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MFATTGILFFIWFLSSSLPPLTIANLNFNLTVPHLLPDPETVAYQVQRSVNDSFSRRQML
SIHSKGQSNSCQTGNPIDDCWRCDSNWQANRQRLADCGIGFGRAAMGGKGGQIYIVTDSS
DSDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGC
ITLQYISNIIIHNINIHHCVPTGHTNIRSSPTHIGYRGKSDGDGISIFSSRNIWIDHCSL
SYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGFTPDSAMQVTIAFNLFGEKLVQ
RMPRCRRGYIHVVNNDFRSWEMYAIGGSGNPTINSQGNRYIAPGNPNAKEVTKRVDTNAG
DWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSLPPKSAALVDQLTLNAGVFGGSRE
SRQSNSYPGDESTTSSGSSGSDGGGDYFGMIFGGGGMNSAPPPSLSVVNVVILTLFTVLV
LYTNSNYDVLLSLTTLSL
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgttcgctactactggcattctgttcttcatctggtttttgagctcatctctgcctcct
cttaccattgcaaatttgaacttcaatcttactgtcccacatcttcttccagatcctgag
actgttgcttatcaagttcagaggagtgtgaatgattccttttccagaagacaaatgctg
tccattcattcaaaaggacaatccaattcctgtcaaaccggaaaccctatcgacgattgt
tggcgctgcgactccaactggcaagccaatcgccaacgactagctgattgcggcattgga
ttcggccgagctgccatgggagggaaaggaggtcagatctacatagttacagattcctcc
gattctgaccctgtaaaccctcgccctggaactctccgctacgccgtggttcaagatgaa
cctctctggattgtctttgctgcagatatgacaatcaaacttaaatacgaacttatgatg
aacagttacaaaaccctagatggccgcggcgccaatgtccacattaccggcggcggttgc
atcacactccaatacatctcgaatataatcatccacaatatcaacatccatcactgtgtt
cctaccggccacaccaacatccgatcgtctccaacgcatatcggatacagaggaaagtcc
gacggcgacggaatctcgatctttagctcgcgcaacatctggatcgatcattgctcgctc
tcatactgtaccgatggcttaatcgacgccattatgggatcgaccggaatcacgatctcg
aacaactacttctcgcaccacgacgaggtgatgttgctagggcatgacgacggctttacg
ccggactcggcgatgcaggtgacgattgcgtttaatttgttcggcgagaagctggttcag
aggatgccgcggtgccgacggggatacattcacgttgttaacaacgacttccgatcttgg
gagatgtacgccattggcggcagcggtaatccgacgatcaacagccaagggaatcggtat
attgctccgggaaatcccaatgcgaaggaggtaacgaagcgcgtggacacaaacgcgggg
gattggtcggagtggaactggaggacggaaggggacataatggtaaatggagcatttttt
gtgccctccggcgaaggactgagcaatatgtacgttaaagcttccagtttgccgcccaaa
tccgccgctcttgtcgaccagctcactctcaacgccggtgtcttcggcggctccagggag
agtagacagagcaactcatatcccggagacgaaagcaccaccagctcgggatccagtggc
agcgatggtggtggtgactattttgggatgatatttggcggaggcgggatgaacagtgca
ccaccaccatctctttcagttgttaacgttgtcattctaactctgtttaccgttttagtt
ctgtacacaaactcgaactacgatgttttattatcattaacaacattgtcattgtag
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