Benincasa hispida (wax gourd): 120078136
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Entry
120078136 CDS
T07258
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120078136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhj03021
]
120078136
03036 Chromosome and associated proteins [BR:
bhj03036
]
120078136
Transcription machinery [BR:
bhj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120078136
Chromosome and associated proteins [BR:
bhj03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120078136
PBAF complex
120078136
GBAF(ncBAF) complex
120078136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
120078136
NCBI-ProteinID:
XP_038888284
LinkDB
All DBs
Position
5:complement(32332719..32337289)
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AA seq
565 aa
AA seq
DB search
MSVNNNNANSNSMVRNVGATIPVNNSPSSNNLGRNVGAAPHFGNSGMVPQTRPMNHHGHL
LSQSQPQIHSGSHFSGHFQLSEPRARTMSHVQYTQAHAQAQAQSAHAHLQAHTQPVHLHS
ANANNVSITPSISTPGTGSYKRPTQKPPSRPAGSFNTSTSSPFKTMELTPATRRKKVKLP
EKQIPDKVAALLPESAIYTQLLEVEGRIDAALARKKKDIQESLKNPSCIQKTLRIYVFNT
FENQNQNNSDQNSVESPSWSLKIIGRILEDGKDPVITGAMQNYNSTYPKFSSFFKKITIY
LDQSLYPDNHIILWESARSPVPQEGFEVKRKGDKEFTAVIRLDMNYTPEKFRLSPSLSDV
LGIETDTRSRIMAALWQYVKANKLQNSNDPSFITCDPGLRKVFGEEKVKFSMVSQKISQH
LIPPQPINIQHRVKISGNSPVGTTCYDVMVDVPFPIEKQKSAFLANLEKHKDIDSCDELI
TAAVKKIHEHCRRRAFFLGFSQSPADFINNLITSQTKDLKIVAGDASRLSERERHSNFYS
QSWVEDAIIRYLNRKPAGSDVPGST
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtaaataacaacaatgctaatagcaacagtatggtgaggaatgtgggggcaact
attccagtgaataacagccctagtagtaacaatttggggaggaatgttggggcggcccca
cattttgggaattcaggcatggttccgcaaacaaggccaatgaaccatcatggccatcta
ctctctcagtcacagcctcaaatacatagtgggtcacatttttcaggtcattttcaattg
tccgagccacgggcacgtacaatgtctcatgtacagtacacgcaggctcatgctcaggca
caagctcaatctgctcatgcacatcttcaagctcatactcaacctgtccatcttcatagt
gccaatgctaataatgttagtataacaccctctatttcaacacctggaacagggagttat
aagaggcccactcagaagccaccttctagacctgcagggtcttttaacactagcactagt
tcaccatttaaaaccatggagctaactccagccactagaagaaagaaggttaagcttcct
gagaaacaaatacctgataaagttgctgctcttctgccagaatctgctatttatacccaa
ttgcttgaagttgagggtcgtatagatgctgctctagcaagaaagaaaaaggatattcaa
gagtctttaaagaatccttcatgcattcaaaaaaccctacggatctatgtcttcaataca
tttgaaaatcagaatcaaaataattctgatcagaatagtgtagaatccccttcatggtca
cttaagataattggaaggatcttggaagatggaaaagatcctgttatcactggagccatg
caaaattataattctacatacccaaaattttcatctttcttcaagaaaattactatatac
ttagatcaaagcctttatccagataaccatataattctatgggagagtgcccgttctcct
gttccacaagagggctttgaagtgaagagaaaaggagacaaagaatttacggcagtgata
cgattggacatgaattacacccccgaaaagtttcgtctttcaccttctctgtcagatgtg
cttggaattgaaacagacactcgctcaaggattatggctgcactatggcagtacgtgaaa
gctaacaagttgcagaattcaaatgatccttctttcattacatgtgatccaggtcttcgg
aaagtgtttggtgaagagaaggtgaaattttctatggtctctcagaagatatcgcaacat
ttaattcctccacagcctataaacatacaacatagagttaagatttcgggaaactctcct
gttggaactacatgttatgatgtcatggtggatgtgccttttccaatagaaaaacaaaag
tcagcattcttagcaaaccttgagaagcataaagatatagattcctgtgatgaattgatt
actgctgcggtaaagaagatccatgagcactgtcgaaggcgagctttctttcttggcttc
agtcagtctccagcagattttatcaataacttgataacttctcaaacaaaggatttaaag
atagttgctggagatgctagccgtctttcagagagagaacgtcactccaatttctacagt
caatcatgggtggaggatgctatcattcggtatctgaaccgtaaacctgctggaagtgat
gttcctggaagtacttaa
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