Benincasa hispida (wax gourd): 120086032
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Entry
120086032 CDS
T07258
Name
(RefSeq) chaperone protein ClpB4, mitochondrial isoform X1
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
bhj03110
]
120086032
Chaperones and folding catalysts [BR:
bhj03110
]
Heat shock proteins
HSP100
120086032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
Clp_N
AAA_5
AAA_22
AAA_16
Sigma54_activat
nSTAND3
AAA_14
Mg_chelatase
Zeta_toxin
IstB_IS21
AAA_28
AAA_18
AAA_7
ABC_tran
AAA_24
TniB
NACHT
NBD_SMAX1
Torsin
PduV-EutP
Retrotrans_gag
Motif
Other DBs
NCBI-GeneID:
120086032
NCBI-ProteinID:
XP_038898368
LinkDB
All DBs
Position
9:complement(77634563..77640649)
Genome browser
AA seq
1025 aa
AA seq
DB search
MFSRTESSILQGSIALSTSRRLSSSSLSLCNLFSLIGKKMATRRVSKLTRPALAAIDATK
LSHSRSIFSSSPALSRSSSSSLSNSIGPSSVAKIFGSRPVNGASMASAKYLATIFTRNFH
STLPSRYSATASSQINQTDFTEMAWEGIVGAVDTARANKQQVVESEHLMKTLLEQKDGLA
RRIFSKAGLDNSSVLQATVDFISQQPKVTGETSGPIIGTHLGLILDNARKHKKEMGDDFL
SVEHFVLAFHSDKRFGQQLFKNLQLSEKDLKDAVQAVRGNQRVTDQNPEGKYEALDKYGT
DLTELARRGKLDPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRG
DVPEPLLNRKLISLDMGSLVAGAKFRGDFEERLKAVLKEVTASNGQIILFIDEIHTVVGA
GATGGAMDAGNLLKPMLGRGELRCIGATTLKEYRKYIEKDPALERRFQQVFCGQPSVEDT
ISILRGLRERYELHHGVKISDSALVSAAVLAGRYITERFLPDKAIDLVDEAAAKLKMEIT
SKPTELDEIDRAVLKLEMEKLSLKNDTDKASKERLSKLEQDLSSLKQKQKELTEQWDREK
SFMTRIRSIKEEIDRVNLEMEAAEREFDLNRAAELKYGTLISLRQQLEEAEKNLQDFRKS
GISLLREEVTDLDIAEIVSKWTGIPLSNLQQSERDKLVLLEQVLHQRVVGQDIAVKSVAD
AIRRSRAGLSDPNRPIASFMFMGPTGVGKTELAKALAGYLFNTENALVRIDMSEYMEKHA
VSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHHDVFNILLQLLDDGRITDS
QGRTISFTNCVMIMTSNIGSHYILETLSNTKDSKDAVYELMKKQVIGLARQTFRPEFMNR
IDEYIVFQPLDATQICKIVEIQIKLLRDRLKQKNINLHYTEEALELLGTLGFDPNYGARP
VKRVIQQLVENEIAMQVLRGDFQEDDSIILDVDKSSFAKDLPPQKRLCIKKINSNSTSEA
MVAND
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaagaacagagtcgagcattctccaaggttccattgctttatcgacaagccgg
cgtttatcatcttcgtccctctctctttgtaatcttttctctttgatcggaaaaaaaatg
gcgaccagaagagtttcgaagctcaccaggcctgctttagccgccattgacgccaccaag
ctttctcattctcgctccattttctcttcttcgcctgcactgtcgcgttcttcgtcttct
tctcttagtaattccatcggtccctcttctgttgcaaagatttttggttccagacctgtc
aatggcgcttccatggcgtcggccaagtatttggctacgattttcactcggaatttccat
tctacgcttccttctcgctactctgccacggcttcttctcagataaatcagacagacttc
actgagatggcatgggaaggcatagttggggcagttgatactgcacgggcgaataaacaa
caagttgtggagagtgaacatttaatgaaaacacttcttgaacagaaggatggccttgca
aggagaatattttctaaggccggacttgacaattcatcagttttgcaggctacagttgat
tttatatctcaacaacctaaggtaacgggcgaaactagtggtccaataataggcacccat
ctaggtttgattttggacaatgctcgaaaacataaaaaagaaatgggagacgattttctt
tctgtggaacattttgtgttagccttccattcagataagagatttgggcagcaactattt
aagaacttgcaacttagtgaaaaggacttgaaggatgctgttcaggctgttcgtggaaat
cagagggtgactgatcaaaatcctgaaggaaaatatgaggctcttgacaagtatgggact
gacttaactgaacttgctagacgcggtaagctcgatccagtcataggaagagatgatgaa
ataagacgatgcatccaaattctatcgaggagaactaaaaacaatcccgtgatcattggt
gagccaggtgttgggaaaactgcaatcgccgaaggattagctcaacgaattgtgcgtggg
gatgttccagaacctttgttgaatagaaagttaatatctctggacatgggttcactggtt
gctggtgcaaaattccgtggagatttcgaggaaagattgaaggccgtgctaaaggaagtc
actgcctcaaatgggcaaattatcttgttcatagacgaaattcatacagttgttggtgca
ggggctactggtggtgcgatggatgctggcaacctgttgaaacctatgcttggtcgaggt
gaactacgatgtatcggtgcaactacattgaaggagtatagaaaatacattgagaaagat
cctgcactcgaacgtagatttcagcaagtattttgtggccaaccatctgttgaagataca
atctctattcttcgtgggttacgagagcgatatgagctacatcatggtgtaaagatatct
gatagtgcacttgtatcagcagccgttttagcaggcagatacatcacagaacggtttttg
cctgacaaagctattgatcttgttgatgaagctgctgcaaagttgaagatggagattact
tctaagcctactgagttggatgagattgaccgtgcggttttgaaattggagatggagaag
ctctccttaaaaaatgacacagataaagccagcaaagaaaggttaagcaaattagagcaa
gatcttagttcacttaaacaaaagcaaaaagagttgactgaacaatgggatcgcgaaaaa
tctttcatgacccgtatacgatctatcaaggaagagattgatagagttaatctcgagatg
gaagcggctgaaagagaatttgatttgaatcgggctgctgagctcaagtatggaactcta
atatcccttcgccagcaattagaagaggctgaaaagaatctacaggacttccggaagtct
ggaatttctttgcttcgtgaagaggtcacagatcttgatattgctgagattgtaagcaaa
tggacgggcatacctttgtccaaccttcaacaatccgagagagacaaactagttttactt
gaacaagtactccatcagagggtggttggtcaagatattgcagtaaaatcagttgcagat
gccattcgtcgttcaagagcaggactctctgatccaaatcgacctatagccagcttcatg
tttatgggcccaacgggtgtggggaaaactgagcttgcaaaagctttggctgggtatctt
tttaacactgagaatgctcttgttaggattgatatgagtgaatacatggagaaacatgca
gtgtctcgcttggtaggggcaccacctggttatgttggttatgaagaaggcggccagctg
actgaagtggttcgtcgaaggccttattctgtggtactttttgatgagattgagaaggca
catcatgatgtcttcaacattttgctacaattgttggatgatgggaggataacggattct
cagggtcggaccattagtttcacaaattgtgtcatgataatgacatcaaacattggttct
cactacatccttgaaactctcagtaacacgaaagatagtaaagatgcagtttatgagttg
atgaaaaaacaagttattggattggcaaggcaaactttccggccagagtttatgaaccga
attgatgaatatatcgtctttcaacctttggacgccacccaaatatgcaagattgttgaa
atacagatcaaactactacgtgataggcttaaacagaagaacattaatcttcattacact
gaagaagctctcgagcttttagggacattggggtttgaccctaattatggtgcaaggcca
gttaaaagagtaatacaacaattagtcgaaaatgagatagcgatgcaagttttgagaggc
gattttcaagaagatgactcgatcattctcgatgtcgataaatcttcatttgccaaagac
ttgcctccccaaaaaagattgtgcatcaagaaaataaacagcaattctacttcggaggct
atggttgccaatgactga
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