Bacillus halotolerans: DIC78_09550
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Entry
DIC78_09550 CDS
T06619
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bht
Bacillus halotolerans
Pathway
bht03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bht00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DIC78_09550 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bht03021
]
DIC78_09550 (rpoB)
03400 DNA repair and recombination proteins [BR:
bht03400
]
DIC78_09550 (rpoB)
Enzymes [BR:
bht01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DIC78_09550 (rpoB)
Transcription machinery [BR:
bht03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DIC78_09550 (rpoB)
DNA repair and recombination proteins [BR:
bht03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DIC78_09550 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AZV49239
UniProt:
A0A9Q2QQS2
LinkDB
All DBs
Position
complement(1884207..1887788)
Genome browser
AA seq
1193 aa
AA seq
DB search
MTGQLVQYGRHRQRRSYARISEVLELPNLIEIQTSSYQWFLDEGLREMFQDISPIEDFTG
NLSLEFIDYSLGEPKYPVEESKERDVTYSAPLRVKVRLINKETGEVKDQDVFMGDFPIMT
DTGTFIINGAERVIVSQLVRSPSVYFSGKVDKNGKKGFTATVIPNRGAWLEYETDAKDVV
YVRIDRTRKLPVTVLLRALGFGSDQEILDLVGENEYLRNTLDKDNTENSDKALLEIYERL
RPGEPPTVENAKSLLDSRFFDPKRYDLANVGRYKINKKLHIKNRLFNQRLAETLVDPETG
EILAEKGQILDRRTLDKVLPYLENGIGFRKLYPNGGVVEDEVTLQSIKIFAPTDQEGEQV
INVIGNAYVEEEIKNITPADIISSISYFFNLLHGVGDTDDIDHLGNRRLRSVGELLQNQF
RIGLSRMERVVRERMSIQDTNTITPQQLINIRPVIASIKEFFGSSQLSQFMDQTNPLAEL
THKRRLSALGPGGLTRERAGMEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYAKVNRF
GFIETPYRRVDPETGKVTPRIDYLTADEEDNYVVAQANARLDDEGAFVDDSIVARFRGEN
TVVPRNRVDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLMQPEAPFVGT
GMEYVSGKDSGAAVICKHPGIVERVEAKNVWVRRYEEVDGQKVKGNLDKYSLLKFVRSNQ
GTCYNQRPIVSVGDEVVKGEILADGPSMELGELALGRNVMVGFMTWDGYNYEDAIIMSER
LVKDDVYTSIHIEEYESEARDTKLGPEEITRDIPNVGEDALRNLDDRGIIRIGAEVKDGD
LLVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIIHDVKVFNREDGDE
LPPGVNQLVRVYIVQKRKISEGDKMAGRHGNKGVISKILPEEDMPYLPDGTPIDIMLNPL
GVPSRMNIGQVLELHMGMAARYLGIHIASPVFDGAREEDVWETLEEAGMSRDAKTVLYDG
RTGEPFDNRVSVGIMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEV
WALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGDNVPEPGVPESFKVLIKELQSLGM
DVKILSSDEEEIEMRDLEDEEDAKQADGLALSGDEEPEETASADVERDVVTKE
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
ttgacaggtcaactagttcagtatggacgacaccgccagcgcagaagctatgctcgcatt
agcgaagtgttagaattaccaaatctcattgaaattcaaacctcttcttatcagtggttt
cttgatgagggtcttagagagatgtttcaagacatatcgccaattgaggatttcactggt
aacctctctcttgagttcattgattacagtttaggggagcctaaatatcctgtagaggaa
tcaaaagaacgtgatgtgacttactcagctccgctaagagtgaaggttcgtttaattaac
aaagaaactggagaggtaaaagaccaagatgtcttcatgggtgatttccctattatgaca
gatacaggtacttttatcataaacggtgcggaacgcgttatcgtttcccagcttgttcgg
tctccaagtgtatatttcagtggtaaagtagacaaaaacggtaaaaaaggttttaccgca
actgtcattccaaaccgtggcgcatggttagaatacgaaactgatgcgaaagatgttgtt
tatgtacgcattgatcgcacacgtaagttgccggttacggttcttttgcgtgctctcggc
ttcggctccgatcaagagattcttgatcttgtaggagaaaacgaatacctgcgaaatacg
cttgataaagataacacagaaaacagcgataaagcgctgctcgaaatctacgagcgcctc
cgtcctggagagccgcctacagtggaaaatgcgaaaagcttgcttgattctcgtttcttt
gatccgaaacgatacgatcttgccaatgtaggacgctataaaattaataaaaagcttcat
attaaaaatcgcctctttaatcagagacttgctgaaacgcttgttgatcctgaaacagga
gaaatcctggctgaaaaaggtcagattcttgatagaagaactcttgataaagtactgcca
tacttagaaaacggaatcggtttcagaaagctgtatccgaacggcggtgttgttgaggac
gaagtaacgcttcaatccattaagatctttgctcctactgatcaagaaggagaacaggtt
attaatgtcatcggcaatgcttacgttgaagaagagattaaaaacattacacctgctgat
attatttcttctatcagctacttcttcaacttgctgcacggagtaggcgacacagatgat
attgaccatcttggaaaccgccgtttacgttctgtaggtgaacttctccagaaccaattc
cgtatcggtttaagccgtatggagcgtgtggttcgtgagagaatgtcaattcaagatacg
aatacaattacacctcagcagctgatcaatattcgtcctgttattgcgtccattaaagag
ttctttggaagctctcagctttctcaattcatggaccagacgaacccgcttgctgaatta
acacataagcgccgtctgtcggctcttggaccgggcggattgacacgtgagcgtgccgga
atggaagtgcgtgacgttcactactcccactatggccgtatgtgtccgattgaaacgcca
gagggaccgaacatcggtttgatcaactcactatcatcatatgcaaaagtaaaccgtttt
ggctttattgaaacgccatatcgccgcgttgatcctgaaacaggaaaagtgacgccgaga
atcgattacttaactgctgatgaagaagataactacgttgttgctcaggcaaatgcacga
ctcgatgacgaaggtgcgtttgtggatgacagcattgtagcccgtttccgcggagagaac
accgttgttcctagaaaccgtgttgattacatggatgtatcgcctaagcaggtagtatct
gctgcgacagcatgtatcccgttcttagaaaacgatgactcgaaccgtgccctaatggga
gcgaacatgcagcgtcaggctgtgcctttgatgcagccggaagcgccatttgtaggaact
ggtatggaatacgtatcaggtaaagactctggtgccgctgtgatttgtaaacaccctggt
atcgttgaacgtgtagaagcgaaaaacgtttgggttcgccgctatgaagaagtagacggt
caaaaagtaaaaggaaacctggataaatacagcttgctgaaatttgtccgctctaaccaa
ggtacttgctacaaccagcgtccgatcgtaagtgtcggcgatgaagtggtaaaaggagaa
atccttgctgacggtccttctatggagcttggtgaacttgcacttggccgtaacgtaatg
gtcggcttcatgacatgggatggctacaactatgaggatgccatcatcatgagtgaacgt
cttgtgaaagatgatgtttatacatctattcacattgaagaatatgaatcagaagcacgt
gatactaaactcgggcctgaagaaatcacccgtgatattccgaacgtcggtgaagatgcg
cttcgcaatcttgatgaccgcggaattatccgtatcggggcagaagtaaaagacggagat
cttcttgttggtaaagtaacgcctaagggtgtaacagaacttactgcagaagaacgcctt
cttcatgccatctttggtgaaaaagcccgcgaggttcgtgatacttctcttcgtgtgcct
cacggcggcggaggaattattcacgatgttaaagtcttcaaccgtgaggacggagacgaa
cttcctccaggtgtaaaccagttagtacgcgtatatatcgttcagaaacgtaaaatttct
gaaggggataaaatggccggtcgtcacggtaacaaaggtgttatttctaagattcttcct
gaagaggatatgccttatcttcctgacggcacaccaattgatatcatgcttaacccgctg
ggcgtaccatcacgtatgaacatcgggcaggtattagagcttcacatgggtatggccgct
cgttacctcggcatccacattgcgtcaccggtatttgacggagcgcgtgaagaggatgtt
tgggaaacacttgaagaagccggaatgtctcgtgacgctaaaaccgttctttacgacgga
cgtaccggagagccgtttgataaccgtgtatctgtcggtatcatgtacatgattaaactg
gctcacatggttgacgataaacttcatgcacgctctacaggtccttactcacttgttacg
cagcagcctcttggcggtaaagctcaatttggcggacagcgttttggtgagatggaggtt
tgggcacttgaagcttacggtgcagcttacactcttcaagagattctgactgttaagtct
gatgacgtggttggacgtgtgaaaacatacgaagccatcgttaaaggcgacaacgttcct
gaacctggtgttccggaatcattcaaagtattaattaaagaacttcaaagtttaggtatg
gatgtgaaaatcctttctagcgatgaagaagaaatagaaatgagagatttagaagacgaa
gaagatgcaaaacaagctgacggcctggcgttatcaggtgatgaagagccggaagaaaca
gcatctgcagacgttgaacgcgatgtagtaacaaaagaataa
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