Bombus huntii (Hunt bumble bee): 126866849
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Entry
126866849 CDS
T10446
Name
(RefSeq) tetratricopeptide repeat protein 37 isoform X1
KO
K12600
superkiller protein 3
Organism
bhun Bombus huntii (Hunt bumble bee)
Pathway
bhun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126866849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhun03019
]
126866849
Messenger RNA biogenesis [BR:
bhun03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
126866849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_16
TPR_1
TPR_2
TPR_14
TPR_8
TPR_12
TPR_19
TPR_CcmH_CycH
TPR_17
TPR_11
TPR_6
TPR_9
ARM_TT21_C
TPR_10
ANAPC3
ChAPs
TPR_21
BTAD
TPR_15
HAT_Syf1_CNRKL1_C
DUF7017
PknG_TPR
Motif
Other DBs
NCBI-GeneID:
126866849
NCBI-ProteinID:
XP_050476785
LinkDB
All DBs
Position
6:complement(1969313..1990021)
Genome browser
AA seq
1301 aa
AA seq
DB search
MSNEIKVALKAARDTFREKKYIDVIKKCNKILMRDQNNYSALMLLAAAMKEIDEYKPQVP
LILQKGTKIQADNPLAWYGLVSYYEKNLDNNECYNQLLLAYCKLLEIESDSKFTNIMSRI
SKLFTQLKDVTTITQCIEHLIELRKNLDDNKIKVIDKTLGWLLLDNFYNLNKYQNLLESV
FKSTINDLDATDQQKFYTEYLKILYDKDELIDLVKEAINMHQRFPQDTLPLEYICLAYSE
RNILDENFTDLDITQFYEGCLKLNKECEAAKIAKALDLAKSGNLIIARDILKDILVSTPR
SVCGWMALSQISMKLYCWEDAEVAAKRVLDMKKSKIKNKLLYKMKETLVESTSLTNDKSK
WETALRMCEQIHPSARLDLIRARLSILLHQPDVEILLNNLESKDETRTHTNILRALYLKQ
NKQYDEAVNILDSAVRKPGLAQTSQAWLLLGTIYWEMAEYNYSLMAFLNGIKADRFNWKC
LVYLGQYYRDYGNDMERSRRCYQTALQINPNSEEAGIGLSTAYRLLKNQDANIKLLQMLT
AQDSGPRWAWLQLGLQYLDQGNAEQAIKAFQHVIRADPSDSHCWESLADAYFIRGAHTSA
LKSYQRVLELCPKLLYPMIQLAYIKLIIGQYNEAKKDFEQILINKSCYIPALKGLAETCL
ALAKDYTAKQLLGRVNDYLQQAMDSLTVAIKERKDISCLWKLLGDVCYRVAMLPDKYSHL
KASSILIKYENDEHIVLLKRIDMFSLSARCYCCALSLSPESVFLWYDLALCYLMQLQHDP
SINHKNHASKCLAAAKHAVKLCPSTWKHWNLLGIICMSPYVRNYALAQHAFVMAIDKELN
NAIVWSNLGTLYLYIGNLYKANEAYSRAQRADPSYINSWIGQALIAEIMDRKETVDLFRH
ARQLGYHSQAAIGYTHWVLVMILNPTTKHDILYMDTTQSMHAISSAADVMTWYVENHPND
CHARNAYGLLLERQRLYKSAAEQFAVAVCNSTKNEKDLVSINLARVLIRLKRYNEAIKLC
QGVENINYNSQCNLALALFKAKLYEEAYNTYEKTLQSFANTEAQKSFTLCAMAAIAYSFH
RVNDAKTLLFQCIQIHPPVIIGLLAAASLGILHGDINLVSLVLKELEFSVPNPEYGHHIL
SLYAYYYVMGNDVQRAITILSKEIFRCPGNVKYWTILLRILLDTDLQLFSRCAQKVLFLN
RNIITENHAHVACALSYSCFMLNMGPASIRSMQKLLFTYPASIESWAMFITGFLSRRTLK
KCKMNAEWFVTFISNIQQSYQPTNFMAKWLNDTKTKLKQLN
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatgaaataaaagtagctcttaaagcggctcgtgatacatttagagaaaagaag
tatatagatgtgattaagaaatgtaacaagatattaatgagagatcaaaataattatagc
gcacttatgttattggcggctgcaatgaaagaaattgatgagtataaaccacaagtacca
ttaattctccaaaaaggtacaaaaatccaagcagacaatccattagcttggtacggttta
gtatcttactatgaaaaaaacttggacaataatgaatgttataaccaactattattagct
tactgcaagcttttggaaatagaaagtgactctaagtttacaaatattatgagtagaatc
tcaaaactttttacgcaacttaaggatgttacgactataactcaatgtattgaacattta
attgaattacggaagaatttggatgataacaaaattaaggtcatcgataaaacgcttgga
tggctgctattagataatttttacaatctaaataaatatcaaaatttattagaaagtgtt
tttaaatctacaattaatgatcttgatgcaactgaccaacaaaaattttatacagaatat
ttaaaaattttatatgacaaagatgaattaattgatttggtaaaagaagctatcaatatg
catcagcgattccctcaagatacattaccgttagaatatatatgtcttgcttactcggaa
cgaaatatcttggatgaaaattttactgacctcgatataacacaattttatgaaggttgc
ttaaaattgaacaaagagtgtgaagcagctaaaattgctaaagcacttgatttggcaaaa
tcgggcaatttgattatagcgcgagatatattgaaagatatacttgtatcgacgccgcgc
tcagtatgtggttggatggcattaagtcaaataagtatgaagctttactgttgggaagat
gcagaagttgctgccaagcgagtattagatatgaagaaatctaaaataaaaaataaatta
ttatataaaatgaaagagacattagttgaatcaacgagtttaactaatgacaaatctaaa
tgggaaacagcattacgaatgtgtgaacaaatacatccttcagcgcgtttggatttgatt
cgtgcacgtcttagcatattgttacatcagccagatgtagagattctgctgaacaatttg
gaatcaaaagatgaaaccagaacacataccaatattcttcgagcgttatatttaaaacaa
aataaacaatacgacgaagctgtgaatatacttgattcagccgtccgaaagccaggcttg
gctcaaacttcccaagcgtggttacttcttggtacaatctattgggaaatggcagagtat
aattacagtttgatggcttttttgaatggaataaaagccgatcgttttaattggaaatgt
ctagtttacttgggacagtactatcgtgactatggtaatgacatggaacgttctaggagg
tgttaccaaaccgcgttacaaattaatccaaattctgaagaagctggtattgggttaagt
acggcgtatagacttcttaaaaatcaagatgcaaatataaaattgttacaaatgttaact
gcgcaagatagcggtcctagatgggcgtggttacaactcggtttgcaataccttgatcaa
ggaaatgcggagcaggctattaaagcgtttcaacatgttattagagctgaccccagtgat
agccactgttgggaatcgctagccgatgcgtattttataagaggtgcccacacatcagca
ttaaaatcttatcagcgagtattagagttatgcccaaaattattatatccaatgatacaa
ttagcatatataaaattgattattggacaatataacgaagcaaagaaagactttgaacaa
atattgataaataaatcatgttatatacctgctttaaaaggattggctgaaacctgtttg
gctttagcaaaagactatactgctaaacaacttttgggtcgtgtgaatgactatttgcaa
caagcaatggatagtttaactgtagctattaaagagcgtaaggatatatcttgtctctgg
aagttacttggcgatgtgtgttacagagttgcaatgttaccagacaaatacagtcattta
aaagcatcatctattctaataaaatatgagaatgacgaacatattgtattgcttaaacga
atagatatgttctcattatctgcaagatgttattgttgtgcattatctctttctccggaa
tcagtttttctgtggtatgatttagctttatgctatttaatgcaattacagcatgatcca
tcaatcaatcataaaaatcatgctagtaagtgtctagctgctgcaaaacacgctgttaaa
ctatgtccttcaacatggaaacattggaatcttctgggtattatttgtatgtcaccgtac
gtaaggaactatgcattggcacagcatgcttttgtaatggcgattgataaggaattaaat
aatgctatagtatggtctaatttgggaactttatatctatatataggcaatttgtataaa
gcaaacgaggcttattctcgagctcagcgtgcagatccgtcatatataaatagttggata
gggcaagctttaattgcagaaataatggatcgaaaagaaacagtagatctatttagacat
gcaagacaattaggatatcatagtcaagctgccataggatacactcattgggtacttgtt
atgattttaaatcctactaccaaacatgacattttatatatggatacaacacaaagtatg
catgcaatatcttctgctgctgatgttatgacgtggtatgtagagaatcatccaaatgat
tgtcacgctcgaaatgcatatggattattattagagagacagagactttataagtcagct
gcagaacaatttgccgtagctgtatgtaatagtaccaaaaacgaaaaagaccttgtttct
ataaatttagcacgtgtactaatacgactgaaaagatataacgaagcaataaaattatgt
caaggagttgaaaatatcaactataactctcaatgcaatctcgcgttagcgttattcaaa
gctaagctatatgaagaggcgtataatacatatgaaaaaactctgcaatctttcgcgaat
actgaagcacagaaatcatttacattgtgtgcgatggctgcgatagcatattctttccac
agagtaaatgatgcaaaaactttacttttccaatgcatacaaatacaccctccagttata
ataggtcttttagcggccgcatcgttaggaatattacatggcgatatcaatttagtttca
ttggtactaaaagaattggagttctctgtacctaatcctgaatatggtcatcatattcta
agcttatatgcatattattatgtgatgggaaatgatgttcaacgagccattactattctt
tctaaagaaatctttagatgtcctggtaatgtaaaatattggactatattactcaggata
ttattagatactgacttacaactgtttagtagatgcgcacaaaaagtattgtttcttaat
agaaatattattactgaaaaccatgcacatgttgcatgtgctttatcctatagctgtttc
atgctaaatatgggaccagcaagtattagatctatgcaaaagcttctatttacttatcct
gctagcattgaaagttgggcaatgttcattacaggatttttatcaaggcgtacactgaaa
aaatgtaaaatgaacgccgagtggttcgtaacatttataagtaacatacaacagtcatat
cagccgacaaatttcatggcaaaatggttaaatgacactaaaacaaaattgaaacagctc
aattaa
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