Bidens hawaiensis: 143535605
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Entry
143535605 CDS
T11418
Name
(RefSeq) ubiquitin C-terminal hydrolase 12-like
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
bhw Bidens hawaiensis
Pathway
bhw03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
143535605
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bhw01002
]
143535605
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bhw04121
]
143535605
Enzymes [BR:
bhw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
143535605
Peptidases and inhibitors [BR:
bhw01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
143535605
Ubiquitin system [BR:
bhw04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
143535605
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
143535605
NCBI-ProteinID:
XP_076885931
LinkDB
All DBs
Position
Unknown
AA seq
1118 aa
AA seq
DB search
MTLMTPPPPPIDAEEDEMLVPHSDFAAPDGPQPMEATPAEAPNVVDAPTVDDPPSARFTW
TIENFSRLNSKKIYSDVFFVGGYKWRVLIFPKGNNVDHLSMYLDVADSSTLPYGWSRYAQ
FSLAVVNQIHNKFTVRKDTQHQFNSRESDWGFTSFMPLSELYDPSKGYLMNDTCIVEADV
AVRKVVDYWAHDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPS
GSIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKG
TVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVESL
EGDNKYHAEQHGLQDARKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDL
DRENGKYLSPQADRSVRNLYTLHSVLVHSGGVHGGHYYAYIRPTLSDQWFKFDDERVTKE
DMKRALDEQYGGEEELPQANPGFNNSPFKFTKYSNAYMLVYIRESDKEKIICNVDEKDIA
EHLRIRLKKEQEEKEQKRKEKAEAHLYTIIKVARDQDLHEQIGKDIYFDLVDHDKVRSFR
IQKQTSFALFKEDVAKELGIPVQYQRFWLWAKRQNHTYRPNRPLTPQEEAQSVGHLKEVS
NKANNAELKLFLEVELGQDLLPVSPPVKSKEEILLFFKLYDPLKEELRFVGRLFVKATGK
PMEILAKLNAMAGFAPDEEIELFEEVKFEPNVMCEHVDKKLTFRGSQLEDGDIICFQKPL
KVESAEACRYPDVPSFLEYVHNRQVVRFRSLEKPKEDEFSLELSKLNNYDDVVERLARHL
NLDDPSKIRLTSHNCYSQQPKPQPIKYRGVEHLSDMLAHYNQTSDILYYEVLDIPLPELQ
GLKTLKVAFHHATKDEVVIHTIRLPKQSTVGDVINDLKTKVELSNPNAELRLLEVFYHKI
YKIFPLNEKIENINDQYWTLRAEEVPEEEKDLGPQDRLIHVYHFTKDTTQNQQVQNFGEP
FFLVIREGETLAEVKVKIQKKLQVPDEEFSKWKFAFLSLGRPTYLQDSDIVSSRFQRRDV
YGAWEQYLGLEHSDNSPKRSYAANQNRHTFEKPVRIYN
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgacgctcatgactcctcctcctcctcccatcgatgctgaggaggacgagatgctagtt
ccacattctgattttgctgcaccggatggaccgcaaccgatggaagctacaccagcagaa
gctcccaatgttgttgatgcaccaactgttgatgatccgccgtcagcacggttcacgtgg
actatagaaaatttttcgaggttgaattcgaaaaagatatactcagatgttttctttgtt
ggaggctataaatggcgagttctcatatttccaaaaggaaataatgttgaccatctgtcg
atgtaccttgatgttgctgattcctcaacgctgccatatggttggagtagatatgctcaa
ttcagcttagctgtggttaatcaaattcataacaagttcacggttagaaaagatacccaa
caccagtttaattcacgagagagtgattggggtttcacttcatttatgcctctaagcgag
ctttatgatcccagcaaaggctatcttatgaatgacacatgcatagttgaagctgatgtg
gcagtccggaaggttgttgattactgggcacatgattcaaagaaggagactggttatgtt
ggccttaaaaatcaaggtgctacttgctatatgaactccctgctacagacattataccat
atcccgtatttcaggaaggctgtgtatcatatgccaacaactgaaaatgatatgccatca
gggagtattcctcttgctttgcagagcttattttataagcttcagtatagtgacacaagc
gttgccacaaaagagttgactaagtcttttggctgggatacatatgattcttttatgcag
catgatgttcaagaactaaatcgagttctctgtgagaaacttgaagacaaaatgaaggga
actgttgtggagggtacaattcagcagttatttgaaggacaccatatgaactatattgaa
tgtataaatgttgactacaagtcaacaagaaaggagtctttttatgatcttcagcttgat
gtcaaaggttgccgtgacgtgtatgcttcatttgacaagtatgttgaagtagaaagtctt
gaaggcgacaacaaatatcatgctgaacaacatgggctacaggatgcaaggaagggtgtt
ctgttcattgatttcccacctgttcttcaactccagctaaaacgttttgaatatgatttc
atgcgagacacgatggtgaagataaatgatcggtatgaattccccttgcaactggatctt
gatagagaaaatgggaagtatttatcaccacaggcagacagaagtgttcgcaacctttac
acacttcacagtgtgttggttcacagtggtggggtacatggtggacattattatgcttac
attcggccaacgctttctgatcaatggtttaagtttgatgatgagcgtgttaccaaagaa
gacatgaagagggcattggatgaacagtatggaggagaagaggagttacctcaagcaaac
cctgggttcaacaattctccatttaaatttactaagtattcaaatgcatatatgcttgtg
tatatacgtgaaagtgacaaggagaaaataatttgtaatgtggacgagaaggatattgca
gagcacctaagaataaggttgaaaaaggaacaagaagaaaaggagcaaaaaagaaaagag
aaagcagaggctcatttatatacaattataaaggttgctagagatcaggaccttcatgaa
cagataggaaaagatatatattttgatctagtagatcatgacaaagttcgtagcttccgt
atccaaaaacaaacatcgtttgcccttttcaaggaagatgtagctaaagagttgggtatt
cccgtgcaatatcaacgtttctggctatgggcaaagcgccaaaatcacacttaccgtccc
aatcgtccactgacacctcaagaagaagctcagtctgttggacatttgaaagaggtatca
aataaggctaacaatgctgagcttaagttgtttctggaagtagaacttggacaggatcta
cttcctgtctcgccacctgtgaaaagcaaagaggaaattctacttttcttcaaactttat
gatcctttgaaggaagaacttcggtttgttgggcgactctttgtgaaggctactggaaag
ccaatggaaatactggcaaagctaaatgcgatggctggcttcgcacctgatgaagaaatt
gaactatttgaggaagttaagtttgagcccaatgttatgtgtgaacatgttgacaagaaa
ctaacttttaggggaagccagcttgaagatggagatatcatttgctttcagaaacctctt
aaggttgaaagtgcagaagcatgtcgttatcctgatgttccctcttttctggagtatgtt
cacaatcgtcaggttgtgcggtttcgttcactggagaagcccaaggaggatgagttttct
ctggaactgtcaaaactcaacaattatgatgatgtggtggaaagacttgctcgccatcta
aacttagatgatccttctaaaatcaggcttacatctcacaactgttattctcaacaacct
aaacctcagccaatcaaatatcgtggagtggaacatctatcagacatgctggctcactac
aatcagacttctgatattttgtactatgaagtattggatatccctctgccagaacttcaa
ggcctaaaaactctaaaagttgcctttcatcatgctactaaagatgaagtggtaattcat
actatcagactcccaaagcaaagcacagtaggggatgttatcaatgaccttaagaccaaa
gttgagttgtctaatccaaatgcagaacttcgcctgcttgaggttttctaccacaaaatc
tacaagattttccctctgaatgaaaaaattgagaatatcaatgatcaatactggacgtta
cgagccgaggaggttccagaagaagaaaaggatctaggtcctcaggaccgtctaattcac
gtttatcattttacaaaagacacaactcagaatcagcaagttcagaactttggggaaccg
ttcttcctggtaattcgggagggtgaaacattagctgaagttaaagtaaagatacagaag
aagttacaagttccagatgaggagttttccaagtggaagtttgcatttctgtctttggga
cgtcccacctatcttcaggactctgatatcgtctctagtcgttttcagcgaagagacgtc
tatggtgcttgggaacaatatttgggattggagcactctgacaattcacccaagaggtct
tatgctgcaaatcagaaccgtcacacatttgagaaaccggttagaatttacaattaa
DBGET
integrated database retrieval system
