Bidens hawaiensis: 143551690
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Entry
143551690 CDS
T11418
Name
(RefSeq) uncharacterized protein LOC143551690
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
bhw Bidens hawaiensis
Pathway
bhw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
143551690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bhw03000
]
143551690
03019 Messenger RNA biogenesis [BR:
bhw03019
]
143551690
04121 Ubiquitin system [BR:
bhw04121
]
143551690
Enzymes [BR:
bhw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
143551690
Transcription factors [BR:
bhw03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
143551690
Messenger RNA biogenesis [BR:
bhw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
143551690
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
143551690
Ubiquitin system [BR:
bhw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
143551690
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
143551690
NCBI-ProteinID:
XP_076898186
LinkDB
All DBs
Position
Unknown
AA seq
568 aa
AA seq
DB search
MSNEEEKRCPLCAEEMDWTDQQLKPCKCGYEVCVWCWHHIIDMAEKDATEGLCPACRTPY
DKNRIVGLESNFQRVSANNSSKKQKQPKAKHKPNEGRKDLSSVRVIQRKMAYIIGLPISL
ADEDLLQRKDYFGQYGKVTKVSLSRTSGGTVQQFANDTCSVYIAYSKEEEAVRCIQSMHG
YVLDGRFLRASFGTAKYCHSWLRNTPCNNVACLYLHTIGAEEDSFGKDEIAAVHTRNRVQ
EIVGATQYLHKRSGSMLPPPVDEHSNSRSASVQEVAHAAVASDDILSCSNNKDEEIKSTK
HVKSFVDIVARPCNSGADKDISLVSEEPMLNLCSDMSSVCINRSNLDKAECSDFVPLKSS
TSKLYSEPFREASRPLSLGQDDLTHMDTNITKEQPGLVLDSQHSLKPVEVIKNSDHWCHT
ESSSQNVYGVNNHAESRLNSVYNEKIFENLAKLDRIHGGSKSIFNEEIVEQLRRLDDDSL
VNDDKNSAAVESSIISNILSMDFDGCDDSVLPQTVTGLFDKKDGRHGSLWSFQKSDQSRF
SFANEGSVENQDRAYKPQYQGMRITSII
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatgaagaagagaagaggtgtcctttgtgtgcagaagagatggattggactgat
caacaattaaagccttgcaaatgtggttatgaggtgtgtgtttggtgttggcatcacata
atcgacatggctgaaaaggatgcaacagagggattatgtcctgcatgccggacaccatat
gataagaatagaattgtagggttggaatcaaattttcagagggtgtctgctaataattct
agtaaaaaacaaaagcaaccgaaggctaaacacaaaccgaatgaaggaaggaaagacctt
agcagtgtccgagttattcaacgaaaaatggcgtatattattgggctgcccattagtctg
gccgatgaagatttattgcagcggaaagattattttgggcaatacgggaaagttactaag
gtttctctttctcggacatcgggtgggactgttcaacagtttgccaacgacacttgtagt
gtatatattgcatactcgaaagaggaagaagcagtgaggtgtattcaatccatgcatggc
tatgtgctggatggtaggtttttaagagcatcatttgggaccgcaaagtactgtcattca
tggttaaggaatacgccctgcaacaatgttgcatgtttatatttgcatactattggcgca
gaagaagatagttttggcaaagatgaaattgctgcagttcatactaggaatagagttcaa
gaaattgttggtgctactcaatatttgcataaacgctcgggtagtatgttgccacccccg
gtagatgaacactcaaatagccgcagtgcttccgttcaggaggtagcacatgctgcagta
gcttctgatgatattttgtcgtgttctaacaacaaagacgaagaaataaaatcaaccaaa
catgtgaaaagttttgttgatattgttgcaaggccgtgtaattcaggtgcagataaagat
attagtttagtatcagaagagccgatgctaaacttatgttctgatatgtcttctgtatgc
atcaataggagtaatcttgacaaggctgaatgttctgattttgtgccattaaaatcatca
accagcaagttatatagtgagccttttagggaagcttctagacctctttctctaggacaa
gatgatctaacccatatggacactaacattacaaaagaacaaccaggtttggtattagat
tcacaacattctttgaaacccgttgaggtaattaagaatagtgaccattggtgtcatacg
gagtcgagtagtcaaaacgtttatggtgtaaataaccatgcagaatctagattaaacagt
gtatacaacgagaagatatttgaaaatttggctaagttagatagaatacatggagggtct
aaatctatttttaatgaagagatagtagagcaactgagacggcttgatgatgatagtctt
gtgaatgatgacaaaaattctgctgctgttgaaagcagtataatatcaaatatattatcc
atggattttgatgggtgtgatgattcggttttgcctcaaacggtaactggattgtttgac
aagaaagatggacggcatggttctttatggagttttcaaaagagtgatcaatcaagattt
tcttttgcaaatgaaggttctgttgagaaccaggaccgtgcctacaaaccgcaatatcaa
ggtatgcgtatcacatccatcatctag
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