Bidens hawaiensis: 143560412
Help
Entry
143560412 CDS
T11418
Name
(RefSeq) putative pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
bhw Bidens hawaiensis
Pathway
bhw00040
Pentose and glucuronate interconversions
bhw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
143560412
Enzymes [BR:
bhw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
143560412
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
143560412
NCBI-ProteinID:
XP_076904835
LinkDB
All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
MEHRRTYIVVLYTQLLLNIVQETDASMEFKNLTLPGQHPSPDHVSQDIQRKVNMSITRRQ
MLTYTNVDSSTSCLTGNPIDDCWRCDPDWRLNRQRLADCGIGFGQYAVGGKGGRYYVVTD
SSDNDVINPRPGTLRYAVIQTEPLWIVFPTNMHIQLSQELIFNSFKTLDGRGANVHVTGG
GCITLQYITNIIIHNIHIHHCYQSGNTMIRSSPTHIGYRTRSDGDGVSIFGSRDIWIDHC
SLSHCKDGLIDAIMGSTGITVSNSLFSHHDEVMLLGHSDDYLPDSGMQVTIAFNHFGKSL
VQRMPRCRRGYIHVVNNVYSRWEMYAIGGSGNPTINSQGNRYTAPANRNAKEVTKRVETA
QEHWKGWNWRSEGDILMNGAFFLASGEGLELKYEKAYSVEPKSAALIDQLTMHAGVLGGR
SNKLGKWTDGDGNGNGDGGVGDENDYGEDSDGSSQPVNMTFISSFLIALLSFLFMCSCDR
LMLL
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggagcatagaagaacctacattgtggtgttgtacactcaattactattgaacatagtt
caagaaactgatgcatcaatggagttcaagaatctgaccctacctggccaacacccttcc
cctgaccatgtttctcaagatattcaaaggaaggtaaacatgtcgatcacaagaagacaa
atgctaacatacaccaacgttgactcatcaacctcatgtttgaccggcaacccaatcgac
gattgttggcggtgcgacccagactggcgcctcaaccgccagcgcctcgccgactgcggc
atcggcttcggtcaatacgcagtcggcgggaaaggcggccgctattacgtcgttaccgac
tcctcagacaacgacgtaatcaacccccgcccaggcactctccggtacgccgtcatccaa
accgaacccctctggattgtcttcccaaccaacatgcacatccaactctcccaagaacta
atattcaacagcttcaaaacgttagacggtcgtggagccaatgtccacgtcaccggtggc
ggctgcattacattacaatacataacaaatattattattcataacattcatatccatcat
tgttaccaatccggtaacaccatgatccggtccagcccgacccatatcgggtaccgaacg
agatccgacggtgatggtgtatccatattcgggtcacgggatatttggatagaccactgc
tcgttgtcgcattgtaaagacgggttgattgatgcgattatggggtcaactggaataacg
gtttctaacagcttgttctcgcatcatgatgaggtgatgttgcttgggcatagtgacgat
tacttgccggactcaggcatgcaggtgacgatcgcgtttaaccattttgggaagagtttg
gtgcagaggatgccgcggtgccggagagggtatatccatgtggtgaataatgtgtattcg
agatgggagatgtatgccatcggagggagtgggaatccaacgattaatagtcagggaaac
cggtatactgctccggccaaccgtaatgccaaggaggtgacaaagagggtggagacagca
caagagcattggaaaggatggaattggaggagtgaaggggatattcttatgaacggagct
ttcttcttggcatcgggcgaagggctagagcttaagtacgagaaagcctatagtgtagag
ccaaaatcagcagccttgattgatcaactcaccatgcatgccggtgtgcttggtggcagg
agcaataagcttgggaagtggaccgatggtgatggtaatggtaatggtgatggaggtgta
ggtgatgaaaatgactatggtgaagatagtgatggatcttctcagccagttaatatgact
tttatttcatctttcttgattgcattgttatcgttcttgtttatgtgttcttgcgatcgg
cttatgttattgtga
DBGET
integrated database retrieval system