Bidens hawaiensis: 143583912
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Entry
143583912 CDS
T11418
Name
(RefSeq) protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
bhw Bidens hawaiensis
Pathway
bhw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
143583912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhw03019
]
143583912
Enzymes [BR:
bhw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
143583912
Messenger RNA biogenesis [BR:
bhw03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
143583912
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
143583912
NCBI-ProteinID:
XP_076922201
LinkDB
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Position
Unknown
AA seq
437 aa
AA seq
DB search
MAYGVATSGPAAGTSPAMKQVKLEKESELRIEVNVNTSLRLRLLNGTAEIFGTEMPPENW
LIFPPRMKFAIFTWYGATIEMQDNTETDYVADETPMISYVNVHAVLEGRRNRAKASASDA
DASQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITLPGCIAATPIE
MPIDPVEGIPLEMPLVYFYGHNTPTVNADLYRVLVKELAQILERQFTGNAESRAAGMVIN
TMGFIDGLGYDLLLHAIDTFQATVVLVMGQDKLCSMLKDVLKQKPNVDVVKLQKSGGVVS
RNSKFRAIARNQRIREYFYGLSNDLSPHSSIANFSDLAIYRVGGGPQAPASALPIGAQPV
ADPMRLVPVNINRDLLNLVLAVSFAKEQDQILSSNIAGFIWITDIDIPRKKITYLAPSGG
ELPSKFLLMGSLTWIET
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcctacggcgttgcaacttccggtccagccgcaggcacttctcctgcaatgaagcag
gtgaaactcgagaaagagagtgagctcagaattgaagtcaatgttaacacttctctccgt
ctccgcctacttaacggcaccgccgagatatttggcaccgaaatgccccccgaaaactgg
ctcatttttccacccaggatgaaattcgctatatttacgtggtacggggcgaccattgaa
atgcaagataacactgaaacggattatgtggcagacgagacaccgatgatcagttatgta
aacgtgcatgcggtacttgaaggtcgcagaaatcgggctaaagcctctgctagtgatgct
gatgcttcccagggtccgagggtgattgtagttggaccaacagactctggaaagagtacc
ttatcaagaatgcttctaagctgggctgctaaacaaggatggaaacctacatttgtagat
ttagacatcggtcaaggctctattaccctacccgggtgtattgcagctacccctattgaa
atgccaattgatccagtcgaagggattccccttgaaatgcctctcgtttacttctatgga
cacaacactccaactgtaaatgcagatctttatagggtgcttgtaaaggaacttgcacag
atacttgaaagacagtttaccgggaatgctgaatctagggctgcaggcatggttattaac
accatgggattcattgatggccttggttatgatcttcttttgcatgcaattgatacattc
caagctactgtcgttcttgtcatgggtcaggataagctttgcagtatgttaaaagatgtt
ttaaaacaaaagccgaacgtggatgtcgtaaaacttcagaaatcaggcggtgttgtgtcc
aggaattcaaaatttcgagctattgccaggaaccagaggataagggaatatttctatggt
ctttcgaatgatctttcaccgcattccagtattgcaaatttcagtgacttggcgatttat
agagttggtgggggcccacaggccccggcttcagctttgccaattggtgcacagcctgtg
gcggaccccatgagattggttccggtcaacatcaaccgggatttgctgaatttggttctt
gctgtttcatttgccaaagaacaagatcaaatactttcgagcaacatagctggatttatt
tggatcactgatattgacattccgaggaagaaaatcacgtatcttgccccatcaggtgga
gaacttcctagcaaattcttgttaatgggaagcttaacatggattgaaacctaa
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