Bidens hawaiensis: 143610333
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Entry
143610333 CDS
T11418
Name
(RefSeq) tetratricopeptide repeat protein SKI3-like
KO
K12600
superkiller protein 3
Organism
bhw Bidens hawaiensis
Pathway
bhw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
143610333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhw03019
]
143610333
Messenger RNA biogenesis [BR:
bhw03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
143610333
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
143610333
NCBI-ProteinID:
XP_076940952
LinkDB
All DBs
Position
Unknown
AA seq
1173 aa
AA seq
DB search
MDAEKDSQNDSVFMKLSEAVTINPDDPSAHFNLGLFLWDRIGEESKQKAAEHFVIAAKLN
PQDANAFRYLGHYYSKVSVDTQRALKCYQRAVTLSPQDSESGESLCDLLDKDGKESLEVA
VCHEASGKSPRAFWAFRRLGFLQVHQKKWSEAVQSLQQAIRGYPTSADLWEALGLAYQRL
SMFTAAIKSYGRAIELEESRVFSLVESGYVFMMIGSHRKGVELFQQALQISPENLAAHYG
LGCALLELSKECISSGAFRWGASILEEASKVVKAGTYLGKNISCMWKLHGDIQISYAKCY
PWMDENPALETDKKALSASIIIWKNSCLSAALSAKHSYQQSLRLAPWQANIYTDIAITID
VINSFKDAQKHDLIQRELPEKMILGGLLLESCNNEFWVALGCLSHHVEVKQHAFIRSLQL
DVSLAVAWANLGMLYRKQNEKNLAQQAFDRARSIDPSLALPWAGMSADMSFRKVYPDEAY
DCCLRAVQILPLPEFQMGLAKLALLSGQLSSSEVFGPIRQALHHAPQYPEAHNLLGLVCE
ARGDYLSAITSFRLARCAVNISSGDTEKLLDISINLTRAYCKAGIANEAVQECEELKKKG
VLDWEGLHIYALSSWQLGKKDQALSVVRILAARVKSLEPNLASASITFICRFLYYISGRE
SVITSILKMPKNLFESSKVSFVVSAIHILDQSNQLEAVVSSSRSSLLSQDQITGMHFLIT
LSKLVKDSSEGCLGIQNGIYHLKKTLHKYPNSYMLRNFLGYLLVSSNERKDTHLSTRCFT
VRCTTAECPKEEGLKRAPEILGASAVACYTTGSLNHKYSFPTCEDQSPHQHRSLKLLQRW
YHQEPWNRNARYLLILNYMQKAREERYPQHIRTGLERLTSLAISDESHHYQRFQLLICAS
EINLQSGNITGCINHAKSASKIPVSGGYLFFAHLLLCRAYAVESNRAGVLGEYTRCLNLK
TDYHIGLIGLKYIESWYGLVEANGCLIELKFEECSKDIKYSWNVWMAVLKLVQGLIAVWN
RDFVGAEELLAQACSLNGSESCLFLCHGAVCMELARQQCNSDYLLLATGSLKKANDMCGA
RLPILQLLLAQAEASLGYKDQWERYLQLEWSTWPPEMRPSEIFLQMHLLLGPLDGGMNSS
RTKQYQKNPLRWILQAIHLNPSCSRYWKALQNL
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgaaaaggacagtcaaaatgactctgttttcatgaagttaagtgaagctgta
accatcaatccagatgacccgtcggcccattttaatctgggtttgttcttatgggatcgg
attggagaagaatccaagcaaaaggcagcagaacattttgtgattgcagcaaagctcaac
ccgcaagatgcaaatgcttttaggtatttgggtcattattatagcaaagtttcagttgat
actcaaagggctctcaagtgttatcagagagctgttactctctctcctcaagactctgaa
tcaggggaatcgttgtgtgatttgttggataaagatggaaaagagagtttggaggttgct
gtctgtcatgaagcttcagggaaatctccaagggcattttgggcatttcgtaggctaggt
tttctacaggttcatcagaagaaatggtcggaagcagttcaaagtcttcagcaggccatc
agaggatatcctacatctgctgatttatgggaggctttaggtcttgcttatcaacgatta
agcatgttcacagctgctattaagtcatatggccgagctatcgagttggaggagtcacgc
gtgttttcattggttgagagtggatatgtcttcatgatgatcggttcacatagaaaggga
gttgagttgtttcaacaagctttacaaatatcacctgaaaatttagctgcacactatgga
cttggatgcgcacttcttgagttatcaaaggaatgcataagttcaggtgcatttagatgg
ggagcttcaatattagaggaggcatcaaaagttgtgaaggctggtacatatttgggcaaa
aatatttcatgcatgtggaagctgcatggtgatattcagatttcatatgcgaagtgttac
ccatggatggatgaaaacccagccttagaaacagataaaaaagcgttgtctgcttcaata
attatatggaaaaactcctgcttatcagctgcactgagcgccaaacactcctatcaacaa
tctctgcgtttggctccatggcaagctaatatctacacagatattgctatcactatagat
gtcataaactcgtttaaggatgctcagaaacatgatctaatccaaagggagttgcctgag
aaaatgattctaggtggattattacttgagagttgcaataatgagttctgggttgcattg
ggatgcttatcacatcatgtggaggtgaaacagcatgcttttatcaggtcgttgcagttg
gatgtgtcattagctgttgcatgggcaaatcttggcatgctttacagaaaacaaaatgaa
aagaatttggcccaacaagcgtttgatcgggccaggagtattgatccttctcttgcatta
ccatgggctggcatgtctgctgatatgtcctttaggaaagtttatccagatgaagcttat
gattgctgtttgcgggctgtgcagatactaccacttccagaatttcaaatgggtcttgca
aaacttgctctgctttctggtcaactttcatcttcagaggtatttgggcccatacgtcag
gctttgcatcatgcaccacaatatcctgaagcccacaatcttttagggcttgtttgtgag
gcgagaggtgattatctctctgccattacctcttttaggctagcacgttgtgcagtcaac
atttcttctggtgacactgaaaaacttcttgatatttcaattaacttgacgagggcatac
tgtaaggccggtatagctaatgaagcagtacaagaatgtgaagaattaaagaagaaaggt
gttcttgattgggaaggtttgcatatatatgctttatcttcatggcaacttggcaaaaag
gatcaggctttgtctgtagtgaggattttagctgcacgcgttaagtcattagaaccaaac
ctggcttctgcatccataacttttatatgtagattcctttattatatttctgggcgagaa
tcagttattacaagcattctcaaaatgcccaagaatttgtttgaaagttccaaagttagt
tttgtggtatctgctattcatattctggatcaaagcaatcagcttgaagcagttgtttca
agtagtcgatcttcactattaagccaggatcaaattactggaatgcattttctgataacg
cttagtaaattggtaaaagatagctcagagggttgcttggggattcagaatggaatatac
caccttaaaaagactctccataaataccctaacagttatatgctaaggaattttctcgga
tatttattagtatctagtaatgaacggaaagatactcatttgtctactagatgctttact
gtgaggtgcaccacagcagagtgtccgaaagaagaaggtttaaagcgcgcacctgaaatt
cttggtgcaagtgcggttgcttgctatacgacagggagtttaaatcataaatactctttt
cctacctgtgaagaccaatcaccgcatcagcacaggtcacttaaactgctgcaaaggtgg
tatcatcaagaaccatggaacagaaacgcaagatacctattaattctcaactatatgcag
aaggcccgtgaagaaagataccctcaacatatacgcacaggactcgaaagattaacgagc
ctggccatttcagacgaatcccatcactaccaaagattccagcttctaatttgtgcttct
gaaataaatctccaaagtggtaacattactggctgcataaatcatgctaaaagcgcctcg
aagattcccgtctctggggggtatcttttctttgcacacttgctgttatgccgggcctat
gctgttgaaagtaaccgggctggtgtacttggagagtacacaagatgtttgaatctgaaa
actgattatcatatcggtttgattgggttgaaatatattgaaagttggtatgggctagta
gaagcaaatgggtgtttaattgaattgaagttcgaggaatgttcaaaggatatcaaatat
tcttggaatgtttggatggcagtattgaaattagttcagggtttgattgctgtttggaat
cgagattttgtcggtgcagaagagctgcttgcacaagcgtgttcgttaaatggttctgaa
agctgtctgtttctgtgtcatggtgccgtatgtatggaacttgctagacaacaatgcaat
tcagactacttgcttcttgcaaccgggagtttaaagaaagctaacgacatgtgtggggcc
cgcttacctatcttgcaactgttgctagcacaagccgaagcgagtctaggatacaaagat
caatgggaacggtaccttcagcttgaatggtcaacatggcctccagagatgaggccgagt
gagatctttcttcaaatgcatttgcttttaggaccgttggatggcggtatgaattcatca
agaacaaaacagtatcagaaaaacccgttaagatggattcttcaagcgattcacctgaat
ccgtcttgttcgagatattggaaagctttacagaatttgtaa
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integrated database retrieval system
