Bidens hawaiensis: 143627200
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Entry
143627200 CDS
T11418
Name
(RefSeq) ubiquitin C-terminal hydrolase 12-like
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
bhw Bidens hawaiensis
Pathway
bhw03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
143627200
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bhw01002
]
143627200
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bhw04121
]
143627200
Enzymes [BR:
bhw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
143627200
Peptidases and inhibitors [BR:
bhw01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
143627200
Ubiquitin system [BR:
bhw04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
143627200
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
143627200
NCBI-ProteinID:
XP_076953196
LinkDB
All DBs
Position
Unknown
AA seq
1265 aa
AA seq
DB search
MHRTPQTFHKRMRIKRPSLPRVTTPLIKTPCFTQQLTTQEPCLYCPSQITTLPPHFSHNP
ETTLTFGQHASPHTFLGRSSHLSLSSFLILSLEFTVDRTVIHRRNMTIVTPQPLDQEDEE
MLVPHTELVDGPQPVQGPVAFDGTPPIEVPQPMEVVGQPEGAGAENQAVEEPQASRFTWT
IENFSRQTNKKLYSDAFVAGGHKWQVIVVSFMFLFFKGTIVDRLSGLCLYFCRRVLIFPK
GNNVDHLSMYLDVADSASLPYGWSRYAQFSLAVVNQLHSKFTVKKDTQHQFHARESDWGF
TSFMPLSDLYDPSRGYLINDRCVIEADVAVRKVIDYWSYDSKKETGYVGLKNQGATCYMN
SLLQTLYHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQYNETSVATKELTKSFGW
DTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQKLFEGHHMNYIECVNVNFKSTRKE
SFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEAHGLQDAKKGVLFTDFPPVLQLQ
LKRFEYDFTRDTMVKINDRYEFPLELDLDRENGKYLSPDADKSVRNLYTLHSVLVHSGGV
HGGHYYAFIRPTLSDQWFKFDDERVTKEDTKRALEEQYGGEEELPQTNPGYNNAPFKFTK
YSNAYMLVYIRENDKDKIICDVDEKDIAEHLRIRLKKEQEEKEDKRRYKAQAHLYTIIKV
ARDADLLEQIGKDIYFDLVDHEKVHNFRIQKQTPFNQFKEEVAKQFGVPVQFQRFWIWAK
RQNHTYRPNRPLTALEETQSVGQLREVSNKNNNAELKLFLEIEIGPDMHPLPPPDKSKED
LLLFFKLYDPEKEELRYVGRFFVKSSAKPTEIILKLNERAGFSSDEEIELYEEIKFEPCV
MCERLDKRSSFRSSQIEDGDIICFQKLPKAEDKYRYPDVPSFLEYVKNRQIVHFRSLDRP
KEDDFCLELSKLHTYDDVVERVAQKLNLDDPSKIRLTPHNCYSQQPKPHPIKYRVAEHLL
DMLVHYNQVSDILYYEVLDIPLPELQCLKTLKVSFHHANKEEPVIHNIRLPKQSTVGDVL
NEIKSKVTLSHENAELRLLEVFYHKIYKIFPLTEKIENINDQYWTLRAEEIPEEEKNLGP
QDRLIHVYHFTKEAAQNHIQVQNFGEPFFLIIHENETLADVKVRIQRKLEVLDEEFSKWK
FAFLSLGRPEYLEDSDVVSSRFQRRDVYGAWEQYLGLEHSDTTPKRSFTANQNRHTFEKP
VKIYN
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgcacccctcaaacattccacaaacgcatgcgaatcaaaagaccttcattacca
cgtgtcaccacaccattgatcaaaacaccatgttttacacaacaacttaccacacaggaa
ccgtgtctctattgcccttcccaaattaccacactacccccacatttctcccataatccc
gaaactacccttacctttggacaacacgcgagtccgcacacatttttagggcgtagcagt
cacctctctctctcatcatttctgattctctctctagaattcaccgttgatcggacggtc
attcatcgccggaatatgacgattgttactccacagccactagatcaggaagacgaggag
atgcttgtgccgcataccgagctagtggacgggccgcaacctgtgcaaggtccggttgct
tttgatggcactccgccgattgaagtccctcagcctatggaagttgtggggcaaccagaa
ggtgctggcgcggagaatcaagcagttgaggagcctcaggcttctagatttacttggact
attgagaatttctctcgccagacaaacaaaaagctatattctgatgcctttgtggccggg
ggacataaatggcaagtaattgtagtgtcttttatgtttttgttttttaagggaacaatt
gtggaccgtttgtcaggattgtgtttgtatttttgcaggcgtgtgcttatatttccaaag
ggcaacaatgtggaccatttgtcaatgtacttagatgtagctgattctgcatccttgcca
tatggttggagtagatatgcacaattcagcttggctgttgttaatcaactgcacagcaaa
ttcactgtaaagaaagacacacaacaccagtttcatgcaagggagagtgattggggattc
acatctttcatgcctcttagtgatctttacgacccgagtagagggtatctcataaatgat
agatgcgttattgaagctgatgtggctgtaaggaaagtaattgactattggtcatatgac
tcaaagaaggaaactggttatgttggtcttaagaaccaaggagcaacatgttacatgaat
tcccttcttcaaaccttgtaccatatcccttactttagaaaggctgtgtaccatatgcca
acaacagaaaatgatatgccttcagggagcattcctctggctcttcagagcttattttat
aagctccaatacaatgaaaccagcgttgccacaaaagaacttacaaaatcttttggatgg
gacacatatgattctttcatgcagcatgatgttcaagaactcaatagggttttgtgtgag
aaacttgaagacaagatgaagggaacagttgtggaagggacaatacaaaagttatttgaa
ggacaccatatgaactatattgaatgcgtcaatgtgaacttcaaatcaacaagaaaagaa
tcattttatgatcttcaacttgatgtgaaaggctgtcgggacgtttatgcttcttttgac
aaatatgttgaagtggaacggcttgagggtgacaataaataccacgctgaagcacatggg
ttacaggatgctaagaagggtgtattgtttaccgatttcccacccgttcttcaacttcag
ctgaagcgttttgaatatgattttacaagggatactatggttaagataaatgatcggtat
gaatttccacttgagctcgaccttgacagggagaatggcaaatatttatctcctgatgct
gataagagtgttcggaatctttatacacttcacagtgtattggttcatagtgggggtgtg
catggtggacactattatgcatttattaggccaactctatcagaccagtggttcaagttt
gatgatgaaagagttactaaagaagatacgaagagggctttagaagagcagtatggcggt
gaggaagagctacctcaaacaaatcctggctacaataatgctccatttaaattcacaaaa
tactcaaatgcgtatatgctggtttacatacgagaaaatgacaaagataagattatctgc
gacgtagatgagaaagatattgcagaacatcttaggataaggcttaagaaagaacaagaa
gaaaaggaagataagagaagatataaagcacaggctcatctgtacactattattaaggtt
gctcgtgatgcagacctgttagaacagataggcaaggatatatattttgatcttgttgac
catgaaaaagttcataactttcgtatacagaaacaaacaccttttaaccaattcaaggag
gaggttgctaaacaatttggtgtgcctgttcaatttcaacgattctggatatgggcaaag
aggcaaaatcacacatatcgtcctaatcgtcctttaaccgctctggaggaaacccaatcg
gttgggcaattgagggaagtttctaataagaataacaatgctgaacttaaattgtttttg
gagatagagatcggaccggatatgcatcctcttccaccacctgacaaaagcaaagaagac
ttacttctcttcttcaagctttatgatcctgagaaggaagaactccgatacgttggtagg
ttttttgtgaagagttctgctaaaccaactgaaattatattaaaactaaatgagagagct
ggatttagttcagatgaagaaattgaactttatgaggaaataaaatttgagccatgtgtt
atgtgtgaacgccttgacaaaaggtcctcatttagatctagccagatcgaagacggagac
attatttgtttccagaaactccctaaagctgaggataaatatcgatatcctgatgtccct
tcatttctagaatatgtgaaaaatcgtcagatagttcattttcgatctcttgatagacct
aaggaagatgatttttgtcttgaactgtcaaaattgcatacatatgatgatgtggtggaa
cgagttgctcagaaacttaatctggatgacccgtcaaaaatcaggcttactcctcacaac
tgttactctcaacaacccaaaccccacccaataaagtatcgtgttgcagaacacctacta
gatatgctggttcactacaatcaggtgtctgatattctgtactatgaagtgttggacatc
cctctgcctgaattacaatgtttgaaaactctgaaagtttcttttcaccatgcaaataaa
gaagagcctgtaattcacaacattaggttgcctaagcagagcactgttggagatgttctc
aatgaaataaagtcaaaggttacactatctcatgaaaatgctgaacttagattgcttgaa
gtattctatcacaagatttacaagatctttcctctgactgagaagattgagaatataaat
gatcaatactggacattacgtgctgaggaaattcctgaagaagagaagaatctgggaccc
caggatcggttgattcatgtttaccatttcaccaaagaggctgcacagaaccatattcaa
gtgcagaactttggggagcctttctttctgataattcatgaaaatgaaactttagcagat
gttaaagtccgaattcaaaggaaattagaagttctagatgaggagttctctaagtggaag
tttgcatttttatctttgggacgtcccgagtatttagaggattcagatgttgtatctagc
cgttttcagagacgagatgtttatggtgcgtgggagcagtaccttgggttagaacattca
gacaccacccctaaaaggtcctttacagcaaatcagaatcgtcatacatttgagaagcca
gtgaagatatacaactag
DBGET
integrated database retrieval system
