Bidens hawaiensis: 143628609
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Entry
143628609 CDS
T11418
Name
(RefSeq) protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
bhw Bidens hawaiensis
Pathway
bhw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bhw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
143628609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhw03019
]
143628609
Enzymes [BR:
bhw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
143628609
Messenger RNA biogenesis [BR:
bhw03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
143628609
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
143628609
NCBI-ProteinID:
XP_076954271
LinkDB
All DBs
Position
Unknown
AA seq
431 aa
AA seq
DB search
MASYGGPTAPAMKQVKLEKESELRIEVNVNTSLRLRLLNGTAEIFGTELPPENWLIFPPR
MKFAIFTWYGATTEMQDNTETDYVVDETPMISYVNVHAVLEGRRNRAKASASDADASQGP
RVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITLPGCIAATPIEMPIDPV
EGIPLEMPLVYFYGHNSPTVNADLYRVLVKELAQILERQFAGNAESRAAGMVINTMGFID
GLGYDLLLHAIDTFQATVVLVMGLDKLCSMLKDVLKQKPNVDVVKLQKSGGVVSRNSKFR
AIARNQRIREYFYGLSNDLSPHSSIANFSDLAIYRVGGGPQAPASALPIGAQPVADPMRL
VPVNINRDLLNLVLAVSFAKEQDQILSSNIAGFIWITDIDIPRKKITYLAPSGGELPSKF
LLMGSLTWIET
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtatgggggtccaaccgcacctgcaatgaagcaggtgaaactcgagaaagag
agcgagctcagaattgaagtcaatgtcaacacttctctccgtctccgcctacttaacggc
accgccgagatctttggcaccgaattgcccccagaaaattggctcatttttccacccagg
atgaaattcgctatatttacgtggtacggggcgaccactgaaatgcaagataatactgaa
acggattatgtagtggacgagacgccgatgatcagttatgtaaacgtgcatgctgtactt
gaaggtcgcagaaatcgggctaaagcctctgctagtgatgctgatgcttcccagggtccg
agggtgattgtagttggaccaacagactctggaaagagtaccttatcaagaatgcttctt
agctgggcagctaaacaaggatggaaacctacatttgtagatttagacatcggtcaaggc
tctattaccctacccgggtgtattgcagctacccctattgaaatgccaattgatccagtc
gaagggattccccttgaaatgcctctcgtgtacttctatggacacaactctccaactgta
aatgcagatctttatagggtgcttgtaaaggaacttgcacagatccttgaaagacagttt
gccgggaatgctgaatctagggctgcaggcatggttattaacaccatgggattcattgac
ggccttggttatgatcttcttttgcatgcaattgatacattccaagctactgtcgttctt
gtcatgggtctggataagctttgcagtatgttaaaagatgttttaaaacaaaagccgaac
gttgatgtggtaaaacttcagaaatcaggcggtgttgtgtccaggaattcaaaatttcga
gctattgccaggaaccagaggataagggaatatttctatggtctttcgaatgatctttca
ccgcattccagtattgcaaatttcagtgacttggcgatttatagagttggtgggggcccg
caggccccagcttcagctttgccaattggtgcacagcctgtggcggaccccatgagattg
gttccagtcaacatcaaccgggatttgctgaatctggttcttgctgtttcatttgccaaa
gaacaagatcaaatactttcaagcaacatagctggatttatttggataactgatattgac
attccaaggaagaaaattacgtatctcgctccatcaggtggagaacttcctagcaagttc
ttgttaatgggaagcttaacatggattgaaacctaa
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