KEGG   Bordetella hinzii: ACR54_01193
Entry
ACR54_01193       CDS       T04004                                 
Symbol
ycfD
Name
(GenBank) 50S ribosomal protein L16 arginine hydroxylase
  KO
K18850  50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
Organism
bhz  Bordetella hinzii
Brite
KEGG Orthology (KO) [BR:bhz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bhz03009]
    ACR54_01193 (ycfD)
Enzymes [BR:bhz01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.47  [50S ribosomal protein L16]-arginine 3-hydroxylase
     ACR54_01193 (ycfD)
Ribosome biogenesis [BR:bhz03009]
 Prokaryotic type
  ribosomal protein modification factors
   ACR54_01193 (ycfD)
SSDB
Motif
Pfam: JmjC_2 WHD_ROXA Cupin_8 DUF3375 AraC_binding Cupin_2
Other DBs
NCBI-ProteinID: AKQ54534
UniProt: A0AAN1RTC4
LinkDB
Position
complement(1208623..1209810)
AA seq 395 aa
MTLDQPLALLGGLSPDDFMRRHWQRKPLLIRQAIPGFKPPETIAALKKLARRDDVESRLI
WREQGQWQMENGPFARLPKASEPDWTLLVQSVDLHSDAAAELMQRFRFVPDARLDDLMIS
IASDGGGVGPHFDSYDVFLLQAAGKRRWRYGRQKDLSLEPDLPLKILSRFEPEHEAVLEP
GDMLYLPPQAAHDGVALGDDCMTISIGFRAPTQAALARGLLEAAADQAMARVGLLGGPYG
EPALPGPRLDGLYRDPGQAATRHPAALPDALVQATLDTLSKLRFDDALAARFLGCWLTEP
SQLAVFDSPEASVDLEDSWPAQGRLVLDRRSRMLYRGKQLFINGETAMVPAEAALRQLAD
ARALDCGDPRCAKLSDEARSCLADWLDSGWLHYRP
NT seq 1188 nt   +upstreamnt  +downstreamnt
atgactctcgaccagcccctcgccctgctcggcggactttctcccgatgacttcatgcgc
cgccactggcagcgcaaaccgctgctgatccgccaggccatccccggtttcaagccgccg
gaaaccatcgccgcgctcaagaagctcgcccgccgcgacgacgtcgaatcgcgcctgatc
tggcgcgaacaaggccaatggcagatggaaaacggccccttcgcgcgcctgcccaaggcc
agcgagccggactggacgctgctggtgcaaagcgtggacctgcacagcgacgccgcggcc
gagctgatgcagcgcttccgcttcgtgcccgacgcccgcctggacgacctgatgatcagc
atcgcctccgacggcggcggcgtgggcccgcatttcgacagctatgacgtcttcctcctg
caggcggccggcaagcgccgctggcgctacggccgccagaaagacctgtcgctggagccc
gatctgccactgaagatattgagccgtttcgagcccgaacacgaagccgtgctcgagccc
ggcgacatgctctatctgccgccgcaggccgcgcatgacggcgtggcgctgggagacgat
tgcatgaccatctccatcggcttccgggcgcctacccaggcggcgctggcgcgcggcctg
ctcgaagccgccgccgaccaggccatggcccgcgtcggcctgctgggcggcccctatggc
gaacccgcgctgcccggtccccggctggacggcctctaccgcgacccgggccaggcagcg
acccggcacccggccgcgctgcccgacgcgctggtccaggccacgctggataccctgtcc
aagctgcgcttcgatgacgcgctggccgcccgtttcctgggctgctggctgaccgaaccc
agccagctggcggtctttgacagccccgaggccagcgtggacctggaagacagctggccc
gcccagggccgcctggtcctcgacaggcgcagccgcatgctctaccgcggcaaacagctc
ttcatcaacggcgaaacggccatggtccccgccgaagccgccctgaggcagctggccgac
gcccgcgcgctggactgcggcgatccgcgctgcgcgaagctgtcggacgaggcccgcagc
tgcctggccgactggctggactccggctggctgcattaccggccctga

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