Bradyrhizobium icense: LMTR13_00765
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Entry
LMTR13_00765 CDS
T04485
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bic
Bradyrhizobium icense
Pathway
bic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LMTR13_00765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bic03019
]
LMTR13_00765
03016 Transfer RNA biogenesis [BR:
bic03016
]
LMTR13_00765
Enzymes [BR:
bic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LMTR13_00765
Messenger RNA biogenesis [BR:
bic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LMTR13_00765
Transfer RNA biogenesis [BR:
bic03016
]
Prokaryotic type
tRNA degradation factors
LMTR13_00765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
DUF5813
Motif
Other DBs
NCBI-ProteinID:
ANV98936
UniProt:
A0A1B1U847
LinkDB
All DBs
Position
complement(149288..151444)
Genome browser
AA seq
718 aa
AA seq
DB search
MFNTHSVEIDWGGRPLKLETGKIARQADGAVMATYGETVVLATVVAAKAPREGVDFLPLT
VDYQEKTYAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLFADGWRNETQVIVTVLSH
DMENDPDVLSMVAASAALTLSGAPFKGPIGAARVAFSNDEYILNPTLDEMTDTQLDLVVA
GTSDAVLMVESEAKELSEEIMLGAVMFGHRHFQPVIKAIIELAEKAAKDPREVTTIDNSE
IEKEMLGLVEQDLRSAYAIPIKQERYAAVGKAKEKVIAHYFPEGQEPKYDKLRIAGVFKE
LEAKIVRWNILDTGKRIDGRDNKTVRNIIAEVGVLPRAHGSALFTRGETQAMVVTTLGTG
EDEQYIDALSGTYKETFLLHYNFPPYSVGETGRLGGTKRREVGHGKLAWRAIHPVLPPHH
EFPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPLKRPTAGIAMGLILEGSRFAVLS
DILGDEDHLGDMDFKVAGTDQGITSLQMDIKIEGITEEIMKVALGQAREGRVHILGEMAK
ALTNARAELGEYAPRIETFKIATDKIREVIGTGGKVIREIVEKTGAKVNIEDDGTVKVAS
NDGEAMKAAIKWIKSIASDPEIGQIYDGTVVKVMEFGAFVNFFGAKDGLVHISQLAASRV
QKTSDVVKEGDKVKVKLLGFDDRGKTRLSMKVVDQTTGEDLEAKQKAEGQAPREAAGE
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatacgcattccgtcgagatcgactggggtggacgtcccctcaagctggaaacc
ggcaagatcgcccgtcaggccgacggcgccgtgatggcgacctatggcgaaaccgtcgtg
ctcgccaccgtcgttgccgccaaagcgccgcgcgagggcgtcgacttcctgccgctgacc
gtcgactaccaggaaaagacctacgccgcgggccgcattcccggcggctacttcaagcgc
gagggacgtccgaccgaaaaggagacgctggtctcccgcctcatcgatcgcccgatccgt
ccgctgttcgccgacggctggcgcaatgaaacccaggtcatcgtcaccgtgctctcgcac
gacatggagaacgatcccgacgtgctgtcgatggtcgcggcctcggccgcgctgacgctg
tcgggtgcgccgttcaagggaccgatcggcgccgcgcgcgtcgccttcagcaacgacgaa
tacatcctcaatcccacgctcgacgagatgaccgacacgcagctcgacctggtcgtcgcc
gggacgtcggacgcggtgctgatggtcgaatccgaagccaaggagctttcggaagagatc
atgctcggcgcggtcatgttcggtcatcgccacttccagccggtgatcaaggcgatcatc
gagctggccgagaaggccgccaaggacccgcgcgaagtcaccaccatcgacaacagcgag
atcgagaaggaaatgctcggcctggtagagcaggacctgcgctcggcttacgcgattccg
atcaagcaggagcgctatgcggcggtcggcaaggccaaggaaaaggtgatcgcgcactat
ttcccggaaggccaggagccgaaatacgacaaactgcgcatcgccggcgtgttcaaggag
ctcgaagccaagatcgttcgctggaacatcctcgacaccggcaagcgcatcgacggccgc
gacaacaagaccgtgcgcaacatcatcgccgaagtcggcgtgttgccgcgcgcccacggc
tcggcgttgttcacccgcggcgagacccaggcgatggtcgtgaccacgctgggcaccggc
gaggacgagcagtatatcgacgcgctgtcgggaacgtataaggagacgttcctgctgcac
tacaacttcccgccctactcggtcggtgaaaccggacgtctcggcggcaccaagcgccgc
gaggtcggtcacggcaagctcgcctggcgcgcgatccatccggttctgccgccgcaccac
gaattcccctacacggtgcgcgtggtctccgagatcaccgaatccaacggctcgtcgtcg
atggcctcggtatgcggcgcctcgctggcgctgatggatgcaggcgttcccttgaagcgg
ccgaccgcgggcatcgcgatgggcctgatcctggaaggctcccgctttgcagtcctgtcc
gacatcctcggcgacgaggatcatctcggcgacatggacttcaaggtggccggcaccgac
cagggcatcacctcgctgcagatggacatcaagatcgagggcatcaccgaggagatcatg
aaggtcgcactcggccaggccagggaggggcgcgtccacattctcggcgagatggccaag
gcgctgaccaacgctcgcgccgagctcggcgaatacgcgccgcgcatcgaaaccttcaag
atcgcaaccgacaagatccgtgaagtgatcggcaccggcggcaaggtgatccgcgagatc
gtcgagaagaccggcgccaaggtcaacatcgaggacgacggcaccgtcaaggtcgcctcc
aacgacggcgaggcgatgaaggccgcgatcaagtggatcaagtcgatcgcctccgatccg
gagatcggccagatctacgacggcaccgtggtcaaggtgatggagttcggcgccttcgtg
aacttcttcggcgccaaggacggcctcgtccatatcagccagctcgccgccagccgcgtg
cagaagacctccgacgtcgtcaaggaaggcgacaaggtcaaggtcaagctgctcggcttc
gacgaccgcggcaagacccggctgtcgatgaaggtcgtggaccagaccaccggcgaggac
ctcgaggccaagcagaaggcggaaggccaggcaccgcgcgaagcggccggcgagtaa
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