Bradyrhizobium icense: LMTR13_16695
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Entry
LMTR13_16695 CDS
T04485
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bic
Bradyrhizobium icense
Pathway
bic03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bic00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LMTR13_16695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bic03021
]
LMTR13_16695
03400 DNA repair and recombination proteins [BR:
bic03400
]
LMTR13_16695
Enzymes [BR:
bic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LMTR13_16695
Transcription machinery [BR:
bic03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LMTR13_16695
DNA repair and recombination proteins [BR:
bic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LMTR13_16695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
ANW01560
UniProt:
A0A1B1UFN5
LinkDB
All DBs
Position
3571370..3575488
Genome browser
AA seq
1372 aa
AA seq
DB search
MAQQTFTGRKRVRKFFGHIKEVAEMPNLIEVQKASYDQFLMVDEPVGGRLDEGLQAVFRS
VFPISDFSGTSMLEFVRYEFEPPKYDVDECRQRGMTYAAPLKVTLRLIVFDIDEETGAKS
VKDIKEQDVYMGDIPLMTMNGTFVVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLFA
ARVIPYRGSWLDIEFDAKDIVFARIDRRRKIPVTSLMYALGLDGEQILSTFYKKINYKRA
KDGWRVPFDATRFRGYSTINDLIDADTGKVVLEAGKKLTVRAARQLQEKGLKALRLSDEE
LIGNYLAEDLVNPKTGEIYAEAGEELTEKSLKALNEQGYKELPLLDIDHVNVGAYIRNTL
HADKNMTREDALFDIYRVMRPGEPPTIDSAQTMFQSLFFDAERYDLSAVGRVKMNMRLEL
DAPDTHRTLRKEDILAVIKTLVDLRDGKGEIDDIDHLGNRRVRSVGELMENQYRIGLLRM
ERAIKERMSSVDIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRLS
ALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFVETPY
RKVKDGRVTDEVVYLSAMEEGRYRVAQANVPLDAKGRFTEDLIVCRHAGEVLPITPDKVD
YMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRAEAPFVGTGMEGVVARD
SGAAIAARRSGVIDQIDATRVVIRATEDLDPTKSGVDIYRLMKYQRSNQSTCINQRPLVK
VGDIVKKGDIIADGPSTDLGELALGRNVLVAFMPWNGYNFEDSILLSERIVKDDVFTSIH
IEEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVRAGDILVGKITPKGE
SPMTPEEKLLRAIFGEKASDVRDTSLRVPPGVQGTIVEVRVFNRHGVDKDERALAIEREE
IERLAKDRDDEQAILDRNVYGRLAELLENRQGIAGPKGFKKDTKITRAVLEEYPKSQWWM
FASPNDKLMAEIEAMRKQYDESKKGLEQRFLDKVEKLQRGDELPPGVMKMVKVFVAVKRK
IQPGDKMAGRHGNKGVVSKIVPIEDMPFLEDGTHADIVLNPLGVPSRMNVGQILETHLGW
ACAGLGKRIGQTIDGYYQKQDLKPLRETLKKIYGDDETIKTLNDNELMELGRNLSHGVPI
ATPVFDGAKEADIEEMLKLAGFDASGQSTVYDGRTGDAFDRKVTVGYIYMLKLHHLVDDK
IHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRT
KVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLNVDLHNSKMGPAPTSEAAE
NT seq
4119 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagacattcaccggtcgcaaacgggtccgcaagtttttcggacacatcaag
gaagtcgccgagatgccgaacctgatcgaggttcagaaggcgtcctacgaccagttcctg
atggtcgacgagccggtcggcggacgactggacgagggcctgcaggcggtgttccgatcg
gtattcccgatctcggacttctccggcacctcgatgctggaattcgtccgctacgaattc
gagccgccgaaatacgacgtcgacgagtgccgtcagcgcggcatgacctatgctgcgccg
ctgaaggtgacgctgcgcctgatcgtgttcgatatcgatgaggaaaccggcgccaagtcg
gtgaaggacatcaaggagcaggacgtctacatgggcgatatcccgctcatgacgatgaac
ggcaccttcgtcgtcaacggcaccgagcgcgtcatcgtttcccagatgcaccgttcgccc
ggcgtgttcttcgaccacgacaagggcaagacccattcctccggcaagctgttgtttgcc
gcgcgcgtgattccgtatcgcggttcctggctcgacatcgagttcgacgccaaggacatc
gtgttcgcgcgcatcgaccgccgccgcaagattcccgtgacctcgctgatgtacgcgctt
ggtctcgacggcgagcagatcctttcgaccttctacaagaagatcaattacaagcgcgcc
aaggacggctggcgcgtgccgttcgacgccacccgcttccgcggctactccaccatcaac
gatctgatcgacgccgacaccggcaaggtggtgctcgaggccggcaagaagctgaccgtg
cgcgcggcgcgccagttgcaggaaaagggcctgaaagccctgcgcctgtcggacgaagag
ctgatcggcaattatctcgccgaggatctcgtcaacccgaagaccggtgaaatctacgcc
gaggccggcgaggagctcaccgagaagtcgctgaaggcgctgaacgagcagggctacaag
gagctgccgctgctcgacatcgaccacgtcaatgtcggcgcctacatccgcaacacgctg
catgccgacaagaacatgacgcgtgaagacgcgctgttcgacatctatcgcgtgatgcgt
ccgggcgagccgccgaccatcgactcggcacagaccatgttccagtcgctgttcttcgac
gccgaacgttacgacctctccgcggtcggccgcgtcaagatgaacatgcgcctcgaactc
gacgcgcccgacacccatcgcacgctgcgcaaggaagacatcctggccgtcatcaagacg
ctggtcgacctgcgcgacggcaagggcgagatcgacgacatcgaccatctcggcaaccgc
cgtgtgcgttcggtcggcgaattgatggagaaccagtaccgcatcggcctgcttcgcatg
gagcgcgcgatcaaggagcgcatgtcgagcgtcgacatcgacaccgtgatgccgcaggac
ctgatcaacgccaagccggccgccgccgcggtgcgcgagttcttcggctcctcgcagctc
tcgcagttcatggaccagaccaacccgctgtcggagatcacccacaagcgccgtctctcg
gcgcttggaccgggcggtctgacccgcgagcgcgctggcttcgaggtccgcgacgtgcat
ccgacgcattacggccgcatctgcccgatcgagacgccggaaggtccgaacatcggcctg
atcaactcgctggcgacgttcgcgcgcgtcaacaagtacggcttcgtcgaaacgccctac
cgcaaggtgaaggacggccgcgtcaccgacgaggtcgtgtatctctcggcgatggaggag
gggcgttatcgcgtggcgcaggccaacgtgccgctcgacgccaagggccgcttcaccgag
gacctgatcgtctgccgtcacgccggcgaagtgctgccgatcacgcccgacaaggtcgac
tatatggacgtgtcgccgaagcagctcgtctctgtcgccgcggcgctgatcccgttcctc
gagaacgatgacgccaaccgcgcgctgatgggctcgaacatgcagcgccaggcggtgccg
ctggtccgcgccgaggcgccgttcgtcggcaccggcatggaaggcgtggtggcccgtgac
tccggtgctgcgatcgccgcccgccgttccggcgtgatcgaccagatcgacgccacccgc
gtcgtgatccgcgctaccgaagatctcgatcccaccaagtcgggtgtcgatatctaccgg
ctgatgaagtaccagcgctccaaccagtcgacctgcatcaaccagcgtccgctggtgaag
gtcggcgacatcgtcaagaagggcgacatcattgccgacggtccgtcgaccgatctcggc
gaactcgcgctcggccgcaacgtgctggtcgcgttcatgccgtggaacggctacaacttc
gaagactcgatcctgctctccgagcggatcgtgaaggacgacgtcttcacctcgatccac
atcgaggagttcgaggtgatggcccgcgacaccaagctcggacctgaggaaatcacccgc
gacattccgaacgtttcggaagaagcgctgaagaacctcgacgaagccggtatcgtctat
atcggcgccgaagtccgtgccggcgacatcctggtcggcaagatcacgccgaagggcgaa
agcccgatgacgccggaagaaaagcttttgcgcgccatcttcggcgaaaaggcttccgac
gtccgcgacacctcgctgcgcgtgcctccgggcgtgcagggcacgatcgtggaagtgcgc
gtgttcaaccggcacggcgtcgacaaggacgagcgtgcactggcgatcgagcgggaagag
atcgagcgtctggccaaggaccgtgacgacgagcaggcgatccttgaccgtaacgtctac
ggccgacttgcggagctgctggaaaaccgccagggcatcgcgggtccgaagggcttcaag
aaggacaccaagatcacgcgcgccgtgctcgaggagtatccgaagtcgcagtggtggatg
tttgcgtcaccgaacgacaagctgatggccgaaatcgaggcgatgcggaagcagtacgac
gaatcgaagaagggccttgaacagcgcttcctcgacaaggtcgaaaagctgcagcgtggc
gacgagttgccgcccggcgtgatgaagatggtcaaggtcttcgtcgcggtgaagcgcaag
atccagcccggcgacaagatggccggccgccacggcaacaagggcgtggtgtccaagatc
gttccgatcgaggacatgccgttcctcgaggacggtacgcacgcggatatcgtgctcaat
ccgctcggcgtgccctcgcgtatgaacgtcggccagattctggagacgcatctcggctgg
gcctgcgccggcctcggcaagcgcatcggccagaccatcgacggctattatcagaagcag
gacctcaagccgctgcgcgagaccctgaagaagatctatggcgacgatgaaaccatcaag
acgctgaacgacaacgagctgatggagctgggccgcaatctgagccacggcgtgccgatc
gcgacgccggtgttcgacggcgccaaggaagccgacatcgaggagatgctgaagctcgca
ggcttcgacgcctccggccagtcgaccgtctatgacggccgcaccggcgacgccttcgac
cgcaaggtgacggtgggctacatctacatgctcaagctgcaccatctggtcgacgacaag
atccacgcgcgttcgatcggtccgtactcgctcgtcacccagcagccgctgggcggcaag
gcgcagttcggcggccagcgtttcggcgaaatggaggtgtgggcgctggaagcttacggc
gcggcctacacgctgcaggaaatgctgaccgtgaagtcggacgacgtcgccggccgtacc
aaggtgtacgaggcgatcgtgcgcggcgacgacacgttcgaggcgggtattccggaatcg
ttcaacgtgctggtcaaggaaatgcgctcgctcggcctcaacgtcgacctgcacaattcc
aagatgggaccggcgccgacgtccgaggcggccgagtaa
DBGET
integrated database retrieval system
