KEGG   Candidatus Bipolaricaulis sibiricus: BIP78_1015
Entry
BIP78_1015        CDS       T05809                                 
Name
(GenBank) 2'-5' RNA ligase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
bih  Candidatus Bipolaricaulis sibiricus
Brite
KEGG Orthology (KO) [BR:bih00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bih03016]
    BIP78_1015
Enzymes [BR:bih01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     BIP78_1015
Transfer RNA biogenesis [BR:bih03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    BIP78_1015
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2 AKAP7_NLS
Other DBs
NCBI-ProteinID: QAA76781
UniProt: A0A410FV03
LinkDB
Position
1028751..1029314
AA seq 187 aa
MRLFYCVELPADVRATVARATRPLQTRIRGATWVSEDNLHITLRFLGEVGEDLLPALRDL
GEGIARETTPFDLSLERLGAFPHPSRARVVWVGPTAESALFAILAQRVEDDVQTLGFPPE
RRPAHPHVTLARLRIPQDLAALVEGTALPLLRTTVDSLTLMSSELRPQGPLYTPVARWPL
RGGSGAL
NT seq 564 nt   +upstreamnt  +downstreamnt
atgcgcctcttctactgcgtggagctgccggcggacgtccgggcaacggtggcgcgggcc
acccgcccgctgcagaccaggatccgcggcgcgacgtgggtcagcgaggacaacctccac
atcacgctgcgattcctgggggaggtcggcgaggacctccttcccgcgcttcgtgacctc
ggggagggcatcgcccgggagacaacgccgtttgatctctctttggagcggctgggcgcg
tttccccatccgagccgagcccgcgtggtgtgggttgggccgaccgccgagagcgccttg
tttgcgatcctcgctcagcgagtcgaggatgacgtccagacgctcggcttcccccccgaa
cgccgaccggctcacccccacgtcacgctggcgcggctccgtattccgcaggacctggcc
gcacttgtcgaggggaccgctctgcccctgctccgcaccaccgtcgacagtctgacgctg
atgagttcagagttgcgtccccagggccccctctacacgccggtcgcccggtggccgctc
cgagggggatcgggtgccctatga

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