Bifidobacterium indicum: BINDI_0878
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Entry
BINDI_0878 CDS
T03564
Name
(GenBank) proteasome accessory factor PafA
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
bii
Bifidobacterium indicum
Brite
KEGG Orthology (KO) [BR:
bii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
bii03051
]
BINDI_0878
Enzymes [BR:
bii01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
BINDI_0878
Proteasome [BR:
bii03051
]
Prokaryotic proteasome
Bacterial regulatory particles
BINDI_0878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
AIC92145
UniProt:
A0A087VUL6
LinkDB
All DBs
Position
complement(1162912..1164333)
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AA seq
473 aa
AA seq
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MHQAPGIDHRRIFGIETEYGVSLTGGDGACSAGQVAMAMFHRLVEQHRSTNIYLSNGARL
YLDVGSHPEYATAEALTPMDALEQDLAGERIMADLAREACSVLADMLGPGVTVHVFKNNV
DAQGHSFGCHENYLLRRQVPLDVVKEQLVPFLVTRQLFAGAGRLGEAGYQLSQRADFLDE
AVSSATTRARPMVNTRDEPHADPDRYRRLHVILGDSNRSQTVTWLKLATTHLVLSLIEEE
VLSGRPHGFGACALANPGEAMRATSRDMTGRASLDMEGGRVMSALDIQRRYWEGCRAYVD
ELGDQADTVLPMADEALGLWRSALDALDDGHWEALASWVDWAAKLRLLNAEAARDADIFK
ARRLDLDYHDVAAGRSYGALVDHGMMDTLVDVNRIREAVRRPPQTTRARLRGDFVSKAEA
TALSWSCDWTHLVVKGTHRHEVTLMDPFACDPDESYRALSEELDRERTRQDSV
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgcatcaggcccccggcatcgatcaccgtcgtatcttcggcatcgagaccgagtacggg
gtcagtctgaccggaggagatggggcctgtagtgccgggcaggtggccatggccatgttc
caccgcctggtggagcagcacaggtcgaccaatatctatctttcgaatggtgccagactc
tacctggacgtcggctcccatcccgagtacgccacggccgaggcactgacccccatggat
gccctcgagcaggatttggctggggagcggatcatggccgatctggcccgtgaggcatgt
tcggtcctcgccgacatgttggggccaggggtcacggtgcatgtgttcaagaacaacgtc
gatgcccaggggcattctttcggctgccatgagaactatctcctccgtcgccaggttccc
ctggacgtggtcaaggagcagttggtgcccttcctggtcacccgccagctgttcgcaggg
gccgggcgattgggggaggccggctatcagcttagccagcgcgcggatttcctggacgag
gccgtatcctccgccacaacgcgagcccgccccatggtcaacacccgcgatgagccccat
gccgatcctgaccggtacagacgcctgcatgtcattctcggggattcaaaccgttctcag
acggtcacctggctcaagctggccaccacccacctggtcctgagtctgattgaagaggag
gtgctgtccggacggccccatggcttcggggcctgtgccctggccaatccgggtgaggcc
atgagggccaccagcagggacatgacgggaagggcctccctggacatggagggcggcagg
gtcatgtcggccctcgatatccaacgcaggtactgggagggttgccgggcctatgtcgat
gagctgggcgaccaggccgacaccgttcttcctatggccgatgaggcccttggcctgtgg
cggtcagccctggatgccctggatgatggtcactgggaggccttggccagttgggttgat
tgggctgccaagctcagactcctcaatgccgaagcggctcgtgatgcagatatcttcaag
gccaggcggctggatttggactaccacgacgtagctgccggtcggtcctacggggcgctg
gtagaccacgggatgatggacaccctggtggacgtgaaccggataagggaggctgtgaga
aggccgccacagaccacccgtgcccgtctacgtggcgacttcgtatccaaggcggaggcg
acagccctgtcgtggtcctgcgattggacccacctggtcgtcaagggcacccacaggcac
gaagtgaccctgatggatccgttcgcctgcgacccagacgagtcatacagggccttgtcc
gaggagttggaccgcgaacggacaaggcaggactcggtctag
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