Bombus impatiens (common eastern bumble bee): 100743028
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Entry
100743028 CDS
T04362
Name
(RefSeq) collagen alpha-3(IX) chain-like isoform X3
KO
K08131
collagen type IX alpha
Organism
bim
Bombus impatiens (common eastern bumble bee)
Pathway
bim04512
ECM-receptor interaction
bim04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bim00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100743028
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100743028
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
bim00535
]
100743028
Proteoglycans [BR:
bim00535
]
Extracellular matrix (ECM) proteoglycans
Others
100743028
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Toxin_R_bind_N
Motif
Other DBs
NCBI-GeneID:
100743028
NCBI-ProteinID:
XP_003491082
UniProt:
A0A6P3DYE2
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Position
Unknown
AA seq
894 aa
AA seq
DB search
MYFSIWIFVLVQFTRTKYTSGEETILNSPRGPCEGYKQGEDDLQTFDFISKLKLDLLEAH
YTGVTRVRGSNRMQIAYRLEKDTDIAQPTKVILPNGLPEEFSTACTFRARKLPKYTWHII
SIVDMENEPQFLIAMNPKIQTLDLSVRNQTGELETVSFPADRIFDKNWHKINVGVFKDRL
VVYIDCEYIDTQDLDLRGTIKVDGEISISKISHSKDVTVPIDIQWMVLNCDPTRPERETC
EELPKSLSSPLLPQRRPGCEIICPQGPPGINGTNGLPGLTGLPGPPGPIGEPGLPGQPGL
RGSPGEQGKVGPQGFTGARGFPGNPGPKGSIGPIGLPGAKGENGERGDMGFPGLKGDQGL
PGPQGYPGPPGPPGKISDYRDAIPKFVGPPGSPGYPGQKGAKGEQGERGDEGKQGEKGEP
GERGSPGQDGSPGSEGRSGLPGFPGPKGEIGFPGVPGPQGLQGLRGEAGAQGSPGIQGQK
GEAGEPGRDGLPGSMVGSILPGPPGPEGPPGSPGEDGLPGVKGEPGPVGPPGLPGLQGKD
GAPGSLGPPGLQGSPGLPGEPGAPGPRGIEGAIGKPGLPGLDGRSAEKGDRGQQGEQGPV
GPRGLPGSVGAPGLPGVAGIPGLEGRPGPPGAPGPPGPAGPPGTISDMLSTNNVLETIGS
PGVSGPRGASGAPGLPGERGPPGERGPEGQMGLPGMPGKDGAPGLQGPPGIRGQTGMPGV
QGPPGRSIIESEIREICTSVLRERLKTLTEGLRGPPGLPGLARQGRPGRIGTQGIPGDPG
LPGLPGERGFVGLPGPQGAIGLQGSPGERGEKGDKGQEGVGVEGPMGPRGPPGPPGNDGA
GLPGRQGERGEPGRPGIPGMRGPPGLHGLPGFCEFCNYQSANYLQYPRGDEKGP
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgtacttctcaatatggatattcgtgcttgtgcaattcacacgtacgaaatatacatct
ggcgaggaaacaattttaaattctcctcgtggaccatgcgagggatacaaacagggcgag
gacgatcttcaaacattcgacttcatcagcaagttgaaactagatcttttggaggcacat
tacactggcgtgacgcgagtcagaggtagcaatcgtatgcaaatcgcctacagattggaa
aaagatacagacatcgctcaaccaaccaaagttatactcccaaacggattgccagaggaa
ttcagcacggcttgcacatttagggccagaaaactgccaaagtatacttggcacattatc
agtatcgtcgacatggaaaacgagccccagtttttaatcgcaatgaacccaaaaattcag
actttggatttatccgtgaggaaccagacaggggaactggaaacggtgtcgtttccggcc
gatcgtatcttcgacaaaaattggcacaaaattaatgttggagtcttcaaggataggctg
gtggtgtatatagattgcgaatacatcgacacacaagacttggatctacgaggaacaatc
aaagtggatggcgagatatcgatatcgaaaatatcacacagcaaagatgttactgtaccg
atcgatattcagtggatggttttaaattgcgatcctacgaggccagagagagagacctgt
gaggaactgccgaagagccttagcagccctttattacctcagagaagacctggctgcgaa
attatctgtccacagggaccaccgggaattaatggcactaatggtttacccggtttaacc
ggattgcctggaccacctggacctatcggagaacccggcttacctggacagccgggttta
cgcgggtcacctggagagcaaggcaaagtaggaccacaaggattcactggtgcacgtgga
tttcctggaaatccaggtcctaaaggatctattgggccaattggactacctggagcaaaa
ggagaaaatggcgaaagaggggacatgggatttccagggttgaaaggagatcaaggcctc
ccgggaccacaaggttatccaggtcctccaggtccaccaggaaagatcagtgactatcgc
gacgctataccaaaatttgtaggcccaccagggtctccgggatatccaggtcaaaaaggt
gcgaagggcgaacaaggagaacgcggcgacgaagggaaacaaggtgaaaaaggtgagcca
ggagaacgaggttccccagggcaagacgggtctcctggttcagaaggaaggtcaggactt
cctggcttccctggacctaaaggagaaataggatttccgggagtaccaggtcctcaggga
ttgcaaggtcttcgtggtgaagctggtgcgcaaggatcacccgggattcagggccaaaaa
ggagaagctggagaaccaggccgtgatggtttgccaggttctatggtcggttccattcta
ccaggaccacctggtcctgaaggtccccctggttcaccaggagaagatggtttgccagga
gtgaaaggagaacctggtcctgttggtccaccgggtcttccaggtttgcaaggaaaggat
ggcgctcctggttctctaggacctccaggattacagggttcacctggcttacctggagaa
ccaggtgccccaggccctcgaggaatcgaaggtgctattggtaaaccaggactaccagga
ctcgatggacgatctgcagaaaaaggcgacagaggtcaacaaggagaacaaggtcctgtt
ggaccacgcggtttacctgggagtgtcggtgcaccgggtttacctggagtcgctggtatt
ccaggattagaagggcggccaggtccgccaggtgccccaggtcctccaggaccagcagga
ccaccaggaacaatttcagacatgttaagtacaaataacgtattggaaactatcggcagt
ccaggagttagtggaccaagaggtgcgtcaggtgctccaggattaccaggtgagagagga
cctcctggagaacgaggtccagagggtcaaatgggactaccgggaatgccaggaaaagat
ggggctccaggacttcaaggaccgccagggattagagggcagacaggaatgccaggagtt
caagggccgccaggccgaagtatcattgagtcagaaattcgagaaatatgtaccagtgtg
ttacgagagaggctgaaaacactaacagaaggtctacgagggccacccgggttgccgggg
ctggcccgacagggtcgtcccggtcgaattggaacccagggcatcccaggtgatccaggt
ctcccaggtttacccggagagcgtggatttgtcggattaccaggaccacaaggcgccata
ggtcttcaaggttcacctggtgaacggggtgagaagggcgataaaggtcaggaaggcgtt
ggcgtagaaggtccaatgggtccgcgaggaccgcctgggccacctggcaatgatggcgct
ggattgcctggaaggcaaggagaacggggggaaccaggcaggccaggcattcctgggatg
agggggccacctggacttcacggattacccggattttgcgagttctgtaattatcaaagc
gccaattacttacagtatcctcgcggcgatgagaaagggccctaa
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