Bombus impatiens (common eastern bumble bee): 100749659
Help
Entry
100749659 CDS
T04362
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
bim
Bombus impatiens (common eastern bumble bee)
Pathway
bim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100749659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bim03019
]
100749659
Messenger RNA biogenesis [BR:
bim03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
100749659
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_16
TPR_1
TPR_2
TPR_14
TPR_8
TPR_12
TPR_19
TPR_CcmH_CycH
TPR_17
TPR_11
TPR_6
TPR_9
TPR_10
ARM_TT21_C
ANAPC3
TPR_21
ChAPs
BTAD
TPR_15
HAT_Syf1_CNRKL1_C
DUF7017
PknG_TPR
Motif
Other DBs
NCBI-GeneID:
100749659
NCBI-ProteinID:
XP_012248867
UniProt:
A0A6P3V6C7
LinkDB
All DBs
Position
Unknown
AA seq
1301 aa
AA seq
DB search
MSNEIKVALKAARDTFREKKYIDVIKKCNKILMRDQNNYSALMLLAAAMKEIDEYKPQVP
LILQKGTKIQADNPLAWYGLVSYYEKNLDNNECYNQLLLAYCKLLEIESDSKFTNIMSRI
SKLFTQLKDVTTITQCIEHLIELRKNLDDNKIKVIDKTLGWLLLDNFYNLNKYQNLLESV
FKSTINDLDATDQQKFYTEYLKILYDKDELIDLVKEAINMHQRFPQDTLPLEYICLAYSE
RNILDENFTDLDITQFYEGCLKLNKECEAAKIAKALDLAKSGNLIIARDILKDILVSTPR
SVCGWMALSQISMKLYCWEDAEVAAKRVLDMKKSKIKNKLLYKMKETLVESTSLTNDKSK
WETALRMCEQIHPSARLDLIRARLSILLHQPDVEILLNNLESKDETRTHTNILRALYLKQ
NKQYDEAVNILDSAVRKPGLAQTSQAWLLLGTIYWEMTEYNYSLMAFLNGIKADRFNWKC
LVYLGQYYRDYGNDMERSRRCYQTALQINPNSEEAGIGLSTAYRLLKNQDANIKLLQMLT
AQDSGPRWAWLQLGLQYLDQGNAEQAIKAFQHVIRADPSDSHCWESLADAYFIRGAHTSA
LKSYQRVLELCPKLLYPMIQLAYIKLIIGQYNEAKKDFEQILINKSCYIPALKGLAETCL
ALAKDYTAKQLLGRVNDYLQQAMDSLTVAIKERKDISCLWKLLGDVCYRVAMLPDKYSHL
KASSILIKYENDEHIVLLKRIDMFSLSARCYCCALSLSPESVFLWYDLALCYLMQLQHDP
SINHKNHASKCLAAAKHAVKLCPSTWKHWNLLGIICMSPYVRNYALAQHAFVMAIDKELN
NAIVWSNLGTLYLYIGSLYKANEAYSRAQRADPSYINSWIGQALIAEIMDRKETVDLFRH
ARQLGYHSQAAIGYTHWVLVMILNPTTKHDILYMDTTQSMHAISSAADVMTWYVENHPND
CHARNAYGLLLERQRLYKSAAEQFAVAVCNSTKNEKDLVSINLARVLIRLKRYNEAIKLC
QGVENINYNSQCNLALALFKAKLYEEAYNTYEKTLQSFANTEAQKSFTLCAMAAIAYSFH
RVNDAKTLLFQCIQIHPPVIIGLLAAASLGILHGDINLVSLVLKELEFSVPNPEYGHHIL
SLYAYYYVMGNDVQRAITILSKEIFRCPGNVKYWTILLRILLDTDLQLFSRCAQKVLFLN
RNIITENHAHVACALSYSCFMLNMGPASIRSMQKLLFTYPASIESWAMFITGFLSRRTLK
KCKMNAEWFVTFISNIQQSYQPTYLMAKWLNDTKTKLKQLN
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatgaaataaaagtagctcttaaagcggctcgtgatacatttagagaaaagaag
tatatagatgtgattaagaaatgtaacaagatattaatgagagatcaaaataattatagc
gcacttatgttattggcggctgcaatgaaagaaattgatgagtataaaccacaagtacca
ttaattctccaaaaaggtacaaaaatccaagcagacaatccattagcttggtacggttta
gtatcttactatgaaaaaaacttggacaataatgaatgttataaccaactattattagct
tactgcaagcttttggaaatagaaagtgactctaagtttacaaatattatgagtagaatc
tcaaaactttttactcaacttaaggatgttacgactataactcaatgtattgaacattta
attgaattaaggaagaatttggatgataacaaaattaaggtcatcgataaaacgcttgga
tggctgctattagataatttttacaatctaaataaatatcaaaatttattagaaagtgtt
tttaaatctacaattaatgatcttgatgcaactgaccaacaaaaattttatacagaatat
ttaaaaattttatatgacaaagatgaattaattgatttggtaaaagaagctatcaatatg
catcagcgattccctcaagatacattaccgttagaatatatatgtcttgcttactcggaa
cgaaatatcttggatgaaaattttactgacctcgatataacacaattttatgaaggttgc
ttaaaattgaacaaagagtgtgaagcagctaaaattgctaaagcacttgatttggcaaaa
tcgggcaatttgattatagcgcgagatatattgaaagatatacttgtatcgacgccacgc
tcagtatgtggttggatggcattaagtcaaataagtatgaagctttactgttgggaagat
gcagaagttgctgccaagcgagtattagatatgaagaaatctaaaataaaaaataaatta
ttatataaaatgaaagagacattagttgaatcaacgagtttaactaatgacaaatctaaa
tgggaaactgcattacgaatgtgtgaacaaatacatccttcagcgcgattggatttgatt
cgtgcacgtcttagcatattgttacatcagccagatgtagagattctgctgaacaatttg
gaatcaaaagatgaaaccagaacacataccaatattcttcgagcgttatatttaaaacaa
aataaacaatacgacgaagctgtgaatatacttgattcagccgtccgaaagccaggcttg
gctcaaacttcccaagcgtggttacttcttggtacaatctattgggaaatgacagagtat
aattacagcttgatggcttttttgaatggaataaaagccgatcgttttaattggaaatgt
ctagtttacttgggacagtactatcgtgactatggtaatgacatggaacgttctaggagg
tgttaccaaaccgcgttacaaattaatccaaattctgaagaagctggtattgggttaagt
acggcgtatagacttcttaaaaatcaagatgcaaatataaaattgttacaaatgttaact
gcgcaagatagcggtcctagatgggcgtggttacaactcggtttgcaataccttgatcaa
ggaaatgcggagcaggctattaaagcgtttcaacatgttattagagctgaccccagtgat
agccactgttgggaatcgctagcggatgcgtattttataagaggtgcccacacatcagca
ttaaaatcttatcagcgagtattagagttatgcccaaaattattatatccaatgatacaa
ttagcatatataaaattgattattggacaatataacgaagcaaagaaagactttgaacaa
atattgataaataaatcatgttatatacctgctttaaaaggattggctgaaacctgtttg
gctttagcaaaagactatactgctaaacaacttttgggtcgtgtgaatgactatttgcaa
caagcaatggatagtttaactgtagctattaaagagcgtaaggatatatcttgtctctgg
aagttacttggcgatgtgtgttacagagttgcaatgttaccagacaaatacagtcattta
aaagcatcatctattctaataaaatatgagaatgacgaacatattgtattgcttaaacga
atagatatgttctcattatctgcaagatgttattgttgtgcattatctctttctccggaa
tcagtttttctgtggtatgatttagctttatgctatttaatgcaattacagcatgatcca
tcaatcaatcataaaaatcatgctagtaagtgtctagctgctgcaaaacatgctgttaaa
ctatgtccttcaacatggaaacattggaatcttctgggtattatttgtatgtcaccgtac
gtaaggaactatgcattggcacagcatgctttcgtaatggcgattgataaggaattaaat
aatgctatagtatggtctaatttgggaactttatatctatatataggaagtttgtataaa
gcaaacgaggcttattctcgagctcagcgtgcagatccgtcatatataaatagttggata
gggcaagctttaattgcagaaataatggatcgaaaggaaacagtagatctatttagacat
gcaagacaattaggatatcatagtcaagctgccataggatacactcattgggtacttgtt
atgattttaaatcctactaccaaacatgacattttatatatggatacaacacaaagtatg
catgcaatatcttctgctgctgatgttatgacgtggtatgtagagaatcatccaaatgat
tgtcacgctcgaaatgcatatggattattattagaaagacagagactttataagtcagct
gcagaacaatttgccgtagctgtatgtaatagtaccaaaaacgaaaaagaccttgtttct
ataaatttagcacgcgtactaatacgactgaaaagatataacgaagcaataaaattatgt
caaggagttgaaaatatcaactataattctcaatgcaatctcgcgttagcgttattcaaa
gctaagctatatgaagaggcgtataatacatatgaaaaaactctgcaatctttcgcgaat
actgaagcacagaaatcatttacattgtgtgcgatggctgcgatagcatattctttccac
agagtaaatgatgcaaaaactttacttttccaatgcatacaaatacaccctccagttata
ataggtcttttagcggccgcatcgttaggaatattacatggcgatatcaatttagtttca
ttggtactaaaagaattggagttctctgtacctaatcctgaatatggtcatcatattcta
agcttatatgcatattattatgtgatgggaaatgatgttcaacgagccattactattctt
tctaaagaaatctttagatgtcctggtaatgtaaaatattggactatattactcaggata
ttattagatactgacttacaactgtttagtagatgcgcacaaaaagtattgtttcttaat
agaaatattattactgaaaaccatgcacatgttgcatgtgctttatcctatagctgtttc
atgctaaatatgggaccagcaagtattagatctatgcaaaagcttctatttacttatcct
gctagcattgaaagttgggcaatgttcattacaggatttttatcaaggcgtacactgaaa
aaatgtaaaatgaacgccgagtggttcgtaacatttataagtaacatacaacaatcatat
cagcccacatatttaatggccaaatggttaaatgacactaaaacaaaattgaaacagctc
aattaa
DBGET
integrated database retrieval system
