Bacillus spizizenii T30: BIS30_10985
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Entry
BIS30_10985 CDS
T05513
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bit
Bacillus spizizenii T30
Pathway
bit03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bit00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BIS30_10985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bit03021
]
BIS30_10985
03400 DNA repair and recombination proteins [BR:
bit03400
]
BIS30_10985
Enzymes [BR:
bit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BIS30_10985
Transcription machinery [BR:
bit03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BIS30_10985
DNA repair and recombination proteins [BR:
bit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BIS30_10985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AJW85642
LinkDB
All DBs
Position
2089277..2092858
Genome browser
AA seq
1193 aa
AA seq
DB search
MTGQLVQYGRHRQRRSYARISEVLELPNLIEIQTSSYQWFLDEGLREMFQDISPIEDFTG
NLSLEFIDYSLGEPKYPVEESKERDVTYSAPLRVKVRLINKETGEVKDQDVFMGDFPIMT
DTGTFIINGAERVIVSQLVRSPSVYFSGKVDKNGKKGFTATVIPNRGAWLEYETDAKDVV
YVRIDRTRKLPVTVLLRALGFGSDQEILDLVGENEYLRNTLDKDNTENSDKALLEIYERL
RPGEPPTVENAKSLLDSRFFDPKRYDLANVGRYKINKKLHIKNRLFNQRLAETLVDPETG
EILAEKGQILDRRTLDKVLPYLENGIGFRKLYPNGGVVEDEVTLQSIKIFAPTDQEGEQV
INVIGNAYIEEEIKNITPADIISSISYFFNLLHGVGDTDDIDHLGNRRLRSVGELLQNQF
RIGLSRMERVVRERMSIQDTNTITPQQLINIRPVIASIKEFFGSSQLSQFMDQTNPLAEL
THKRRLSALGPGGLTRERAGMEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYAKVNRF
GFIETPYRRVDPETGKVTGRIDYLTADEEDNYVVAQANARLDDEGAFIDDSIVARFRGEN
TVVSRNRVDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLMQPEAPFVGT
GMEYVSGKDSGAAVICKHPGIVERVEAKNVWVRRYEEVDGQKVKGNLDKYSLLKFVRSNQ
GTCYNQRPIVSVGDEVVKGEILADGPSMELGELALGRNVMVGFMTWDGYNYEDAIIMSER
LVKDDVYTSIHIEEYESEARDTKLGPEEITRDIPNVGEDALRNLDDRGIIRIGAEVKDGD
LLVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIIHDVKVFNREDGDE
LPPGVNQLVRVYIVQKRKISEGDKMAGRHGNKGVISKILPEEDMPYLPDGTPIDIMLNPL
GVPSRMNIGQVLELHMGMAARYLGIHIASPVFDGAREEDVWETLEEAGMSRDAKTVLYDG
RTGEPFDNRVSVGIMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEV
WALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGDNVPEPGVPESFKVLIKELQSLGM
DVKILSGDEEEIEMRDLEDEEDAKQADGLALSGDEEPEETASADVERDVVTKE
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
ttgacaggtcaactagttcagtatggacgacaccgccagcgcagaagctatgctcgcatt
agcgaagtgttagaattaccaaatctcattgaaattcaaacctcttcttatcagtggttt
cttgatgagggtcttagagagatgtttcaagacatatcaccaattgaggatttcactggt
aacctctctcttgagttcattgattatagtttaggtgagcctaaatatcctgtagaggaa
tcaaaagaacgtgatgtgacttactcagctccgctaagagtgaaggttcgtttaattaac
aaagaaactggagaggtaaaagaccaagatgtcttcatgggtgatttcccgattatgaca
gatacaggtacttttatcattaacggtgcggaacgcgttatcgtttcccagcttgttcgg
tctccaagtgtatatttcagtggtaaagtagacaaaaacggtaaaaaaggttttaccgca
actgtcattccaaaccgtggcgcatggttagaatacgaaactgatgcgaaagatgttgtt
tatgtccgcattgatcgcacacgtaagttgccggttacggttcttttgcgtgctctcggc
ttcggttccgatcaagagattcttgatctcgtaggagagaacgagtacctgcgaaatacg
cttgataaagataacacagaaaacagcgacaaagcgttgctcgaaatttacgagcgtctc
cgtcctggagagccgcctacagtagaaaatgcgaaaagcttgcttgattctcgtttcttt
gatccgaaacgatacgatcttgccaatgtaggacgctataaaattaataaaaaacttcat
attaagaatcgcctctttaatcagagacttgctgaaacgcttgttgaccctgaaacagga
gaaatcctggctgaaaaaggtcagattctagatagaagaacactagataaagtactgcca
tacttagaaaacggaatcggtttcagaaagctgtatccgaatggcggtgttgttgaagat
gaagtaactcttcaatcgattaaaatctttgctccgactgatcaagaaggagaacaggtt
attaatgtaatcggcaatgcttacattgaagaagagattaaaaacattacgcctgctgat
attatttcttctatcagctacttcttcaacttgctgcacggagtaggcgacacagatgat
atcgatcatcttggaaaccgccgtttgcgttctgtaggtgagcttctccaaaaccaattc
cgtatcggtttaagccgtatggagcgtgtggttcgtgagagaatgtcaattcaagatacg
aatacaatcacacctcagcagttgatcaatattcgtcctgttattgcgtccattaaagag
ttctttggaagctctcagctttctcaattcatggaccagacgaacccgcttgctgaatta
acgcataagcgacgtctgtcagcattaggaccgggcggattgacacgtgagcgtgccgga
atggaagtgcgtgacgttcactactcccactatggccgtatgtgtccgattgaaacgcct
gaaggcccgaacatcggtttgatcaactcactttcatcatatgcaaaagtaaaccgtttt
ggctttatcgaaacgccatatcgccgcgttgaccctgaaacagggaaggtaacgggaaga
atcgattacttaactgctgatgaagaggataactatgttgtcgctcaagcgaacgctcgt
cttgatgacgaaggcgcatttattgatgacagcatcgtagcccgtttccgcggggagaac
accgttgtttccagaaaccgtgtagattacatggatgtatcgcctaagcaggttgtttct
gccgcgacagcatgtatcccgttcctagaaaacgatgactccaaccgtgccctcatggga
gcgaacatgcagcgtcaggctgtgcctttgatgcagcctgaagcgccattcgtaggaact
ggtatggaatacgtatcaggtaaagactctggtgccgctgttatttgtaaacaccctggt
atcgttgaacgcgtagaagcgaaaaacgtttgggttcgccgttatgaagaagtcgacggt
caaaaagtaaaaggaaacctggataaatacagcttgctgaaatttgtccgctctaaccaa
ggtacgtgctacaaccagcgtccgatcgtaagtgtcggcgatgaagtggtaaaaggagaa
atccttgctgacggtccttctatggagcttggtgaacttgcacttggccgtaacgtaatg
gtcggcttcatgacatgggatggctacaactatgaggatgccatcattatgagtgaacgc
cttgtgaaggatgatgtttatacatctatccacatcgaagaatacgaatcagaagcacgt
gatactaaacttggacctgaagaaatcactcgcgatattccaaacgtcggtgaagatgcg
cttcgcaatcttgatgaccgcggaattatccgtattggggctgaagtaaaagacggagat
cttcttgttggtaaagtaacgcctaaaggcgtaactgaactgactgcagaagaacgcctg
cttcacgctatctttggtgaaaaagcccgcgaggttcgtgatacttcacttcgtgtgcct
cacggcggcggtggaattatccacgacgttaaagtcttcaaccgtgaagatggagacgaa
cttcctccaggtgttaaccagttagtacgcgtatatatcgttcagaaacgtaagatttct
gaaggggataaaatggccggtcgtcacggtaacaaaggtgttatctctaagattcttcct
gaagaggatatgccttaccttcctgacggcacaccaattgatatcatgcttaacccgctg
ggcgtaccatcacgtatgaacatcgggcaggtattggagcttcatatgggtatggccgct
cgttacctcggcattcacattgcatctcctgtatttgatggagcgcgagaagaggatgtt
tgggaaacacttgaagaagccggcatgtctcgtgacgccaaaacagtgctttacgacgga
cgtactggagagccatttgataaccgcgtatctgtcggtatcatgtacatgatcaaactg
gctcacatggttgacgataaacttcacgcacgctctacgggtccttactcacttgttaca
cagcagcctcttggcggtaaagcgcaatttggcggacagcgtttcggtgagatggaggta
tgggcacttgaagcttacggtgcggcttacactcttcaagagattctgactgtgaagtct
gatgacgtggttggacgtgtgaaaacatacgaagccatcgttaaaggcgataatgttcct
gaaccaggtgttccggaatcattcaaagtattaatcaaagaacttcaaagcttaggtatg
gatgtcaaaatcctttctggtgatgaagaagaaatagaaatgagagatttagaagacgaa
gaagatgcgaaacaagctgatggcctggcattatcaggtgatgaagagccggaagaaaca
gcatctgcagacgtcgaacgagatgtagtaacaaaagaataa
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