Bos indicus (zebu cattle): 109558843
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Entry
109558843 CDS
T04792
Symbol
SLC6A13
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2 isoform X1
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04721
Synaptic vesicle cycle
biu04727
GABAergic synapse
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
109558843 (SLC6A13)
04721 Synaptic vesicle cycle
109558843 (SLC6A13)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
biu02000
]
109558843 (SLC6A13)
Transporters [BR:
biu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
109558843 (SLC6A13)
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
109558843
NCBI-ProteinID:
XP_019815717
UniProt:
A0A6P5BMH1
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Position
5:complement(113873097..113910697)
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AA seq
602 aa
AA seq
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MDSRVSGTTSNGETKPVCPGLEKAAEDGALQREQWSNKMEFXLSVAGEIIGLGNVWRFPY
LCYKNGGGAFFIPYLIFLFTCGIPVFLLETALGQYTSQGGITAWRKICPIFEGIGYASQM
IVTLLNIYYIIVLAWALFYLFSSFTIDLPWGSCRHDWNTERCVEFQRTNGSLNATAENAT
SPVIEFWERRVLKISEGIQHLGALRWELALCLLLAWVVCYFCIWKGVKSTGKVVYFTATF
PYLMLVVLLIRGVTLPGAAQGIQFYLYPNLTRLWDPQVWMDAGTQIFFSFAICLGCLTAL
GSYNKYHNNCYRDSIALCFLNSGTSFVAGFAIFSILGFMSQEQGVPISEVAESGPGLAFI
AYPRAVVMLPFSPLWACCFFFMVVLLGLDSQFVCVESLVTALVDMYPRVFRKKNRREVLI
LGVSVTSFLVGLVMLTEGGMYVFQLFDYYAASGMCLLFVAIFESFCVAWAYGAGRFYDNI
EDMIGYRPWPLIKYCWLFLTPAVCTATFLFSLIKYTPLTYNKKYKYPWWGDALGWLLALS
SMVCIPAWSCYKLSTLKGSFRERVRQLLCPAKDLPQGHREGPSAPATPRTSLLILTELEP
HH
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggatagcagggtctcgggcaccaccagtaatggcgagaccaaaccagtgtgcccaggc
ctggaaaaggcggcggaggatggtgccctgcagcgagagcagtggagcaacaagatggag
ttcstgctgtccgtggccggggagatcattgggctgggcaacgtctggaggttcccctac
ctctgctacaaaaacgggggaggtgccttcttcatcccctacctcatcttcctctttacc
tgcggcattcctgtcttcctcctggagacggcgctgggccagtacaccagtcaggggggc
atcactgcctggaggaagatctgccccatctttgagggcattggctacgcctcccagatg
atcgtcaccctcctcaacatctactacatcattgtcctggcctgggccctcttctacctc
ttcagcagctttaccatcgacctgccctgggggagctgccgccacgactggaacacrgag
cgctgcgtggagttccagaggaccaatggctctctgaatgcgaccgctgagaatgccacc
tctcccgtcatcgagttctgggagcggcgggtcctgaagatctcagagggcatccagcac
ctgggggccctgcgctgggagctggccctgtgcctcctgcttgcctgggtcgtctgctac
ttctgcatctggaagggcgtcaagtccacgggcaaggtggtgtacttcacggccaccttc
ccttacctcatgctggtggtcctattgattcgaggggtgacgctgcccggggcagcgcaa
ggaattcagttctacctgtacccaaacctcacgcgtctgtgggacccccaggtgtggatg
gacgcgggcacccagatcttcttctcctttgccatctgcctagggtgcctgacggccctg
ggcagctacaacaagtatcacaacaactgctacagggacagcatcgcgctctgcttcctc
aacagcggcaccagcttcgtggccgggtttgccatcttctccatcctgggcttcatgtcc
caagagcagggggtgcccatctctgaggtggccgagtcaggccctggcctggccttcatt
gcctacccccgggctgtggtgatgttgcccttctcgcccctctgggcctgctgcttcttc
ttcatggtcgtcctcctgggactggacagccagttcgtgtgtgtggaaagcctggtgacg
gcgctggtggacatgtatccccgtgtgttccgcaagaagaaccgcagggaggtcctcatt
ctgggggtatctgtcacctccttcctcgtcgggctggtcatgctcacagagggcggcatg
tacgtgttccagctctttgactactatgcagccagcggcatgtgcctgctgttcgtggct
atctttgagtccttctgcgtggcgtgggcctayggagctgggcgcttttatgacaacatc
gaggacatgattgggtataggccgtggcctctcatcaaatactgttggctcttcctcaca
ccggctgtgtgcacagccaccttcctcttctccctgatcaagtacaccccgctgacctac
aacaagaagtacaaatacccgtggtggggcgatgccctgggctggctcctggccctctcc
tccatggtctgcattcctgcctggagctgctacaaactcagcaccctcaaggggtctttc
agagagagagttcgccagctcctgtgcccagccaaggaccttccccaggggcaccgagaa
ggaccctccgccccggccacacccaggacatcacttctcatcctcaccgagctggagcct
caccactag
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