KEGG   Bos indicus (zebu cattle): 109566340
Entry
109566340         CDS       T04792                                 
Symbol
SF3B6
Name
(RefSeq) splicing factor 3B subunit 6
  KO
K12833  pre-mRNA branch site protein p14
Organism
biu  Bos indicus (zebu cattle)
Pathway
biu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:biu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109566340 (SF3B6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:biu03041]
    109566340 (SF3B6)
Spliceosome [BR:biu03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    109566340 (SF3B6)
 Complex B
    109566340 (SF3B6)
 Complex C
   U2 SnRNP specific factors
    109566340 (SF3B6)
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_7
Other DBs
NCBI-GeneID: 109566340
NCBI-ProteinID: XP_019826187
UniProt: A0A6P5CMP9
LinkDB
Position
11:77216751..77224922
AA seq 125 aa
MAMQAAKRANIRLPPEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTA
YVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNANRAFQKMDTKKKEEQLKLLKEKYGIN
TDPPK
NT seq 378 nt   +upstreamnt  +downstreamnt
atggcgatgcaagcggccaagagggcgaacattcgacttccaccagaagtaaatcggatt
ttgtatataagaaatttgccttacaaaatcacagctgaagaaatgtatgatatatttggg
aaatatggacctattcgtcaaatcagagtggggaacacacctgaaactagaggaacagct
tatgtggtctatgaggacatctttgatgccaagaatgcatgtgatcacctgtcaggattc
aatgtttgtaacagataccttgtggttttgtactataatgccaacagggcatttcagaag
atggacacaaagaagaaggaagaacagttgaagctccttaaggagaaatatggcatcaac
acagatccaccaaagtaa

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