Bos indicus (zebu cattle): 109573647
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Entry
109573647 CDS
T04792
Symbol
POLR2A
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03020
RNA polymerase
biu03420
Nucleotide excision repair
biu05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109573647 (POLR2A)
09124 Replication and repair
03420 Nucleotide excision repair
109573647 (POLR2A)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
109573647 (POLR2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
biu03021
]
109573647 (POLR2A)
03400 DNA repair and recombination proteins [BR:
biu03400
]
109573647 (POLR2A)
Enzymes [BR:
biu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
109573647 (POLR2A)
Transcription machinery [BR:
biu03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
109573647 (POLR2A)
DNA repair and recombination proteins [BR:
biu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
109573647 (POLR2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_3
RNA_pol_Rpb1_7
RNA_pol_Rpb1_R
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
109573647
NCBI-ProteinID:
XP_019836531
UniProt:
A0A6P5DE69
LinkDB
All DBs
Position
19:27567575..27587714
Genome browser
AA seq
1970 aa
AA seq
DB search
MHGGGPPSGDSACPLRTIKRVQFGVLSPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDP
RQGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLVKTMKVLRCVCFFCSKLLVD
SNNPKIKDILAKSKGQPKKRLTHVYDLCKGKNICEGGEEMDNKFGVEQPEGDEDLTKEKG
HGGCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFVLGMEP
RYARPEWMIVTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAA
HVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVD
FSARTVITPDPNLSIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYII
RDNGDRIDLRFHPKPSDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWS
TFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQD
TLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHI
NCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSLGTSAGSLVHISYLEM
GHDITRLFYSNIQTVINNWLLIEGHTIGIGDSIADSKTYQDIQNTIKKAKQDVIEVIEKA
HNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKIN
ISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHA
MGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGES
VEFQNLATLKPSNKAFEKKFRFDYTNERALRRTLQEDLVKDVLSNAHIQNELEREFERMR
EDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDLHPIKVVEGVKELSKKL
VIVNGDDPLSRQAQENATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAI
AHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLT
VFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMP
DFDVARISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIR
IMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKI
IITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALER
ELYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLM
EAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGLGAAGPTG
MFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPG
YSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSP
SYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP
TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS
YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT
SPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKY
SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS
PKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDDEN
NT seq
5913 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggggtggccccccctccggggacagcgcatgcccgctgcgcaccatcaagaga
gtgcagttcggagtcctcagtccggatgaactgaagcgaatgtctgtgacagagggcggc
atcaaatacccagagacaaccgagggaggccgccccaagctcggggggctgatggatccg
aggcagggggtgattgagaggacgggtcgctgccaaacctgtgcaggaaacatgacagag
tgtcccggccactttggccacattgagctggccaagcctgtgttccacgttggcttcctg
gtcaagaccatgaaagttttacgctgtgtctgcttcttttgctccaagttgcttgtggac
tctaacaacccgaagatcaaggatattttggctaagtccaaggggcagcccaagaagcgg
ctcacacacgtctatgacctctgcaagggcaaaaacatctgcgagggcggggaggagatg
gacaacaagtttggtgtggagcagcctgagggcgatgaagatttgaccaaagaaaagggc
cacggtggctgcggacggtaccagccccggatccggcgctctggcctggagctatacgcc
gaatggaagcatgtcaatgaggactctcaagagaagaagatcctgttgagccccgagcgg
gtgcatgagatcttcaagcgcatctccgacgaggagtgctttgtcctgggcatggagccg
cgctacgcccggcctgagtggatgatcgtcactgtgctgcctgtgcccccgctctccgtg
cggcccgctgttgtgatgcagggctctgcccgcaaccaggacgacctgacccacaagctg
gccgacattgtcaagatcaacaatcagcttcggcgcaatgagcagaacggtgcagctgcc
catgtcattgccgaggacgtgaagctcctccagttccacgtggccaccatggtggacaat
gagctgcctggcttgcctcgtgccatgcagaagtctgggcgtcccctcaagtccctgaag
cagcgattgaaggggaaggaaggccgtgtgcgtgggaacctgatgggcaagcgggtggac
ttctcagcccgcactgtcatcacccccgaccccaacctctccattgaccaggtcggcgtg
ccacgctctattgccgccaacatgacctttgcggagatcgtcacccccttcaacattgac
agacttcaggaactagtgcgcagggggaacagccagtacccgggagccaagtacattatc
cgggacaacggtgatcggattgacctgcgtttccaccccaagcccagtgaccttcacttg
cagactggctacaaggtggaacggcacatgtgtgatggggacattgttatcttcaaccgg
cagccaactttgcacaaaatgtccatgatgggtcatcgggttcgcatcctgccctggtcc
acttttcgcttgaatcttagcgtgacaactccatacaatgctgacttcgacggggatgag
atgaacttgcacctgccacagtccctggagacacgggctgagatccaggagctggccatg
gtgccacgcatgattgtcaccccccagagcaatcgtccagtcatgggcattgtgcaggac
acattgactgcagtgcgcaaattcaccaagagggatgtcttcctggagcggggggaagtg
atgaacctcctgatgttcctgtccacgtgggacgggaaggtcccacagccagccatcctg
aagccccggcccctgtggacggggaagcagatcttctccctcatcatacccggccacatc
aactgtatccgcacccatagcacccaccctgatgatgaggacagyggcccttacaagcac
atctcccccggggacactaaggtggtggtggagaatggcgagctgatcatgggcatcytg
tgtaagaagtctttgggcacgtcagccggctccctggtccacatctcttaccttgagatg
ggtcacgacatcactcgcctcttctactccaacattcagactgtcatcaacaactggctc
ctcattgagggtcataccattggcattggggactccatcgctgattctaagacttatcaa
gacattcagaacacgattaagaaggccaagcaggatgtaatagaggtcattgagaaggca
cataacaacgagctggagcccacgccagggaacaccctgcggcagacgtttgagaaccag
gtgaaccgcattctcaacgatgcccgagataagaccggctcctccgcccagaaatcactg
tctgaatacaataactttaagtctatggtcgtgtctggggccaaaggttccaagatcaac
atctcccaggtcattgctgttgtcgggcagcagaatgtggagggcaagcggatcccattt
ggattcaagcaccggaccctgcctcacttcatcaaagatgactatgggcctgagagccga
ggctttgtggaraactcctacctggccggcctcacgcccactgagttcttcttccatgcc
atggggggccgtgaggggctgattgacacagctgtcaagactgctgaaactggatacatc
cagcggcggctgataaagtccatggagtcggtgatggtgaagtacgacgccaccgtgcgc
aactccatcaatcaggtggtgcagctgcgctatggcgaggatggcctggcgggcgagagt
gtcgagttccagaayctggccaccctcaagccttccaacaaggctttcgagaagaagttc
cgctttgattacaccaatgagagggccctgcggcgcaccctgcaggaagacctggtgaaa
gatgtgctgagcaacgcacacattcagaatgagctagaacgagaatttgagcggatgcgt
gaggaccgggaggtgctcagagtcatcttcccaactggcgacagcaaggttgtcctcccc
tgcaacctgctgcgcatgatctggaatgctcagaagatcttccacatcaaccctcgcctt
ccctccgacctgcaccccatcaaggtggtagagggagtcaaggagttgagcaagaagctg
gtgattgtgaatggggacgaccccctgagccggcaggcccaggagaacgccaccttgctc
tttaacatccayctgcggtccacgctgtgttcccgccgcatggccgaggaattccggctc
agtggagaggctttcgactggcttcttggagagatcgagtccaagttcaaccaagccatt
gcccatccgggggaaatggtgggagctctggctgcacagtccctcggagaacctgccacc
cagatgaccttgaacacctttcactatgctggtgtgtccgccaagaacgtgactctgggt
gtgccccgacttaaggagctgatcaacatttccaagaagccaaagaccccttcacttacc
gtcttcctactgggccagtctgctcgagatgcggagagagccaaggatattctgtgccgc
ttggaacacacaacactgaggaaggtgaccgccaacacggccatctactatgaccccaac
cctcagagcacagtggtggccgaggatcaggagtgggtgaatgtctactatgagatgcct
gactttgatgtggcccgaatctccccctggcttttgcgggtggagctggaccggaagcac
atgactgaccggaagctgaccatggagcagattgccgaaaagatcaatgctggttttggt
gacgatttgaattgcatctttaatgatgataacgcagagaagctagtgctccggatccgc
atcatgaacagtgatgaaaacaagatgcaagaggaggaagaggtggtggacaagatggat
gacgacgtcttcctgcgctgcatcgagtccaacatgctgacggatatgaccctgcagggc
atagagcagatcagcaaggtgtacatgcacttgccgcagactgacaacaagaagaagatc
atcatcacagaggacggggagttcaaggccctgcaggagtggatcctagagacggacggc
gtgagcctgatgcgcgtgctgagtgagaaggatgtggaccctgtgcgcaccacatccaac
gacatcgtggagatcttcacggtgctgggcattgaggccgtacggaaggccctggagcgg
gagctgtaccacgtcatctccttcgacggctcctacgtcaattaccggcacttggctctc
ctgtgtgacaccatgacttgtcgtggccacttgatggccatcactcgacacggagtcaac
cgccaggacactggacctctcatgaagtgttcctttgaggaaacggtggacgtgctcatg
gaagcagctgcgcacggagagagtgaccccatgaagggggtgtccgagaacatcatgctg
ggccagctggctccggctggcactggctgttttgacctcctgctcgatgcagagaagtgc
aagtatggcatggagatccccaccaatatccctggcctgggggctgccggacccaccggc
atgttcttcggctcagcccccagtcccatgggcggaatttctccagccatgacaccttgg
aaccagggtgcaaccccagcctacggcgcctggtcccccagtgttgggagcgggatgacc
ccgggagcagcaggcttctctcccagtgctgcctcagatgccagcgggttcagccctggc
tactccccggcctggtctcccacaccaggctccccgggctccccaggyccctcaagccca
tatattccctcaccagggggtgccatgtctcccagctactccccgacatcgcctgcctat
gagccccgctcccctggaggctacacaccccagagtccctcttactcccccacttccccc
tcctactcccctacttctccgtcctactctccaaccagccccaactacagccccacgtca
cccagctactccccgacctctcccagctactcacccacttctcccagctattcacccacg
tctcccagctactctcccacttccccaagctactctcccacatcacccagctactcaccc
acatcacccagctactcgcccacctctcccagctactcgcccacctctcccagctactcg
cccacctcacccagctactcgcccacctcgcccagctactcgcccacttcgcccagctac
tcaccgacatctccaagctattcaccgacatcgccaagctactctccaacttctccaagt
tactcacccaccagtcctaactattctccaaccagtcccaattacaccccaacatcaccc
agctatagcccaacgtcaccgagctactcacctactagtcccaactacacaccaacaagc
cccaactacagcccaacctctccaagctactctccgacttcacccagctactccccaacc
tcgccaagctactcgccttcaagcccacgatacacaccacagtctcccacctacaccccc
agctcgcccagctacagccccagctcgcccagctacagcccgacttcaccaaagtacacc
ccaaccagtccttcctatagccccagctcaccagagtacacccccacctcccccaagtac
tcacctaccagccccaaatattcacccacctcccccaagtactcacctactagccctacc
tactcacccaccaccccaaaatactcacccacatcgcctacttactcaccaacctctcct
gtctacaccccaacctcccccaagtattcacccactagccccacctactcccccacctcc
cccaagtactcacccaccagccccacctactcccccacgtcccccaaaggctctacttac
tcgcccacctcccccggctactcgcccaccagccccacctatagcctcaccagtccagcc
atcagcccggatgacagtgatgacgagaactga
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integrated database retrieval system
