Bos indicus (zebu cattle): 109577785
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Entry
109577785 CDS
T04792
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03013
Nucleocytoplasmic transport
biu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109577785 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
109577785 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
biu03019
]
109577785 (THOC1)
03041 Spliceosome [BR:
biu03041
]
109577785 (THOC1)
Messenger RNA biogenesis [BR:
biu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
109577785 (THOC1)
Spliceosome [BR:
biu03041
]
Complex C
Other components
EJC/TREX
109577785 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
109577785 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
bDLD3
Motif
Other DBs
NCBI-GeneID:
109577785
NCBI-ProteinID:
XP_019842182
UniProt:
A0A6P5DZ34
LinkDB
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Position
24:complement(36306124..36343169)
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AA seq
657 aa
AA seq
DB search
MSPTPPLFSLPEARTRFTKSTREALNSKNIKPLLNTFSQLPGSENEKKCTLDQAFRGVLE
EEIINHSSCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVERNV
ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDDEAPTTCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERTSDSKPTRAVRKRAAPE
DFLGKGPSKKILMGNDELTRLWNLCPDNMEACKSETREYMPTLEEFFEEAIEQADPENMV
ESEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI
KTGEDEDEEDNDALLKENESPDVRRDKPVTGDQIEVFANKLGEQWKVLAPYLEMKDSEIR
QIECDSEDMKMRAKQLLVAWQDQEGVHATPENLINALNKSGLSDLAESLTNDNETNS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgacgccgccgctcttcagtttgcccgaagcgcggacgcggtttactaaatct
acgagagaggccctgaacagcaaaaatatcaagcccttgttgaatacctttagccagtta
cctggcagtgaaaatgaaaaaaaatgtacccttgaccaggcttttagaggtgttctagaa
gaagaaattataaatcattcatcatgtgaaaacgttttagctattatttctcttgctatt
gggggagtaactgaaggtatttgtacggcatctacaccttttgtattgttgggagatgtt
ttggactgtcttcctttggatcagtgtgacacaatattcacttttgtggaaagaaatgtt
gctacttggaaatcaaatacattctattctgctgggaagaattatttactacgtatgtgc
aatgatctcctacgaagattatcaaaatcccagaatacagtcttctgtggacgaattcaa
ctctttttggccaggcttttccctttatctgagaaatcaggtcttaacttgcagagtcag
tttaatctggaaaatgtcactgttttcaataccaatgagcaggaaagcacattgggtcag
aagcacacagaggacagagaagaaggaatggatgtagaagaaggtgaaatgggagatgat
gaagctccaacaacttgctccattccaattgattacaacctgtaccgaaaattttggtca
cttcaggattactttagaaaccctgtgcaatgctatgagaaaatctcatggaaaactttt
ctcaagtattctgaagaagtcctagctgtttttaagagttataaattagatgatactcag
gcctcaaggaaaaagatggaagaattgaaaacaggaggagagcatgtatattttgcaaaa
tttttaacaagtgaaaagttgatggatttacagctgagtgacagtaacttccgtcgacac
atcctgctgcagtatctcattttatttcagtatctcaaggggcaggtcaaattcaaaagt
tcaaactatgttttaactgatgagcaatcactctggattgaagatactacaaaatcagtt
tatcaactactatctgaaaacccccctgatggagaaagattttcaaagatggtagagcat
atattaaacactgaagaaaactggaactcatggaaaaatgaaggctgcccaagttttgtg
aaagaaagaacatcagacagcaagcccacaagagcagtacggaaaagagcagcgccggag
gacttcctgggcaaagggcccagcaaaaaaattctgatgggcaatgatgagttaacaagg
ctttggaatctctgtcctgacaacatggaagcctgtaaatcagagacaagggaatacatg
ccaactttggaggaattcttcgaagaagccattgaacaggcagaccctgaaaacatggtt
gaaagtgaatacaaggctgtgaacaactcaaattatggttggagagccctaagactgtta
gcacggagaagccctcacttcttccagccaaccaaccagcagtttaaaagtttgccagaa
tacctcgaaaacatggtaataaagctagccaaggaattaccacctccttctgaagaaata
aaaacaggtgaggatgaagatgaggaagataatgatgctttactgaaggaaaatgaaagt
cctgatgttcggcgagacaaacctgtaacaggggaccaaatagaggtatttgccaacaaa
ctgggtgaacagtggaaggtcctggctccttacttggaaatgaaagactcagaaattaga
cagatcgagtgcgacagcgaagacatgaagatgagagccaaacagctgcttgtggcctgg
caggaccaggagggagtgcacgcaacgcccgagaacctgatcaacgcgctcaacaagtct
gggctaagtgaccttgcagaaagtctaactaatgacaatgagacaaacagttag
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