Bacillus sp. JS: MY9_1816
Help
Entry
MY9_1816 CDS
T02027
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bjs
Bacillus sp. JS
Pathway
bjs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bjs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MY9_1816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bjs03019
]
MY9_1816
03016 Transfer RNA biogenesis [BR:
bjs03016
]
MY9_1816
Enzymes [BR:
bjs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MY9_1816
Messenger RNA biogenesis [BR:
bjs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MY9_1816
Transfer RNA biogenesis [BR:
bjs03016
]
Prokaryotic type
tRNA degradation factors
MY9_1816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
SPATA25
Motif
Other DBs
NCBI-ProteinID:
AFI28353
LinkDB
All DBs
Position
1786004..1788121
Genome browser
AA seq
705 aa
AA seq
DB search
MGQEKHVFTIDWAGRTLTVETGQLAKQANGAVMIRYGDTAVLSTATASKEPKPLDFFPLT
VNYEERLYAVGKIPGGFIKREGRPSEKAVLASRLIDRPIRPLFADGFRNEVQVISIVMSV
DQNCSSEMAAMFGSSLALSVSDIPFEGPIAGVTVGRIDDQFIINPTVDQLEKSDINLVVA
GTKDAINMVEAGADEVPEEIMLEGIMFGHEEIKRLIAFQEEIVAAVGKEKSEIKLFEIDE
ELNEKVKALAEEDLLKAIQVHEKHAREDAINEVKSAVVAKFEDEEHDEDTIKQVKQILSK
LVKNEVRRLITEEKVRPDGRGVDQIRPLSSEVGLLPRTHGSGLFTRGQTQALSVCTLGAL
GDVQILDGLGVEESKRFMHHYNFPQFSVGETGPMRGPGRREIGHGALGERALEPVIPSEK
DFPYTVRLVSEVLESNGSTSQASICASTLAMMDAGVPIKAPVAGIAMGLVKSGEHYTVLT
DIQGMEDALGDMDFKVAGTEKGVTALQMDIKIEGLSREILEEALQQAKKGRMEILNSMLA
TLSESRKELSRYAPKILTMTINPDKIRDVIGPSGKQINKIIEETGVKIDIEQDGTIFISS
TDESGNQKAKKIIEDLVREVEVGQLYLGKVKRIEKFGAFVEIFSGKDGLVHISELALERV
GKVEDVVKIGDEILVKVTEIDKQGRVNLSRKAVLREEKEKEEQQS
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgggacaagaaaaacacgtctttaccatagattgggccggaagaacgcttactgttgaa
accggccagcttgccaaacaggcaaatggtgctgtgatgatccgctacggtgatacagca
gtacttagtacagcaaccgcttcaaaagaaccaaaaccgcttgatttcttccctcttact
gtaaactatgaagaaagattatatgcggtagggaaaattccgggcggctttattaaaaga
gaaggacgcccgagtgaaaaagcggttcttgccagccgtttaattgaccgtccgatccgt
cctttgtttgccgatggattccgtaatgaagttcaagtcatcagcattgtcatgagtgtt
gaccaaaactgctcttcagaaatggctgccatgttcggttcatctcttgcgctttctgta
tcggatattccgtttgaaggaccaattgcaggggttactgtcggacgcattgatgatcaa
tttatcattaacccaacagttgatcagcttgaaaaaagcgacatcaatcttgtcgttgcc
ggcacgaaagatgccattaacatggtagaagcgggagcggacgaagttcctgaggaaatc
atgcttgaaggcattatgttcggccatgaagagattaaacgcctgattgcattccaagaa
gaaattgttgcggcagttggcaaagagaaatcagaaattaagctctttgaaattgatgaa
gagcttaacgaaaaagtaaaagctttagcagaagaggatctgctgaaagctatccaagtt
catgaaaagcatgctcgagaagatgccattaacgaagtgaagagcgcagttgtggcaaaa
ttcgaggatgaagagcatgatgaagatacaatcaaacaagtgaagcagattttatctaag
ctggtgaaaaatgaagttcgccgcctgattactgaagagaaagtaagaccggacggccga
ggtgtcgatcaaatccgcccgctttcttcagaagttggcctcttgccaagaacgcacggt
tcaggtctatttacaaggggacaaactcaggccctcagcgtatgtacgctaggtgctctg
ggagatgtgcaaatccttgacggcttaggtgtcgaagagtcgaaacggtttatgcatcac
tacaacttcccgcaatttagcgttggggaaacaggaccgatgcgcggaccgggacgtcgt
gaaatcggacatggagcactgggtgagcgcgcgcttgagccagttattccgtctgaaaaa
gactttccttatactgtccgtcttgtttcagaagtgcttgaatcaaacggttctacgtct
caagcaagcatttgcgcaagcacacttgcaatgatggatgcaggtgtaccgattaaagcg
ccagttgctggtattgcgatgggtcttgtcaaatcaggcgaacattacactgttttgact
gacatccaaggcatggaagacgcgcttggagatatggactttaaagtagcgggaactgaa
aaaggcgtaacggccctgcaaatggacattaaaattgaaggcctttccagagagattctt
gaagaagcgcttcagcaggcgaaaaagggcagaatggaaatcctcaacagcatgcttgca
acattaagcgaatcaagaaaagagctttctcgatatgcgcctaagatcttaacaatgacc
attaatcctgataaaatccgcgatgtcatcggaccaagcggaaaacaaatcaataagatc
atcgaagaaaccggtgttaaaattgatattgagcaggacggcacaatcttcatttcttct
acagatgaaagcggcaaccaaaaagcgaaaaaaatcattgaagaccttgtcagagaggtt
gaagtcggccagctttacctaggtaaagtgaaacggattgaaaaattcggggctttcgtt
gaaattttcagcggaaaagacggtttggtgcacatttcagagcttgcgcttgaacgcgta
gggaaagttgaagatgttgtgaagatcggagacgagattcttgtcaaggtcactgaaatt
gacaaacaaggacgagtgaatttgtctcgcaaagcggtgctccgtgaagagaaagaaaaa
gaagaacaacaatcttaa
DBGET
integrated database retrieval system
