Bubalus kerabau (carabao): 129623619
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Entry
129623619 CDS
T11435
Symbol
LSM4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
bke Bubalus kerabau (carabao)
Pathway
bke03018
RNA degradation
bke03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129623619 (LSM4)
09123 Folding, sorting and degradation
03018 RNA degradation
129623619 (LSM4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bke03019
]
129623619 (LSM4)
03041 Spliceosome [BR:
bke03041
]
129623619 (LSM4)
Messenger RNA biogenesis [BR:
bke03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129623619 (LSM4)
mRNA degradation factors
5'-3' decay
Lsm complex
129623619 (LSM4)
Spliceosome [BR:
bke03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
129623619 (LSM4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129623619
NCBI-ProteinID:
XP_055397312
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Position
1:174303871..174316179
Genome browser
AA seq
139 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVAKGRGRGGLQQQKQQKGRGMGGAGRGVFGGRGRGGI
PGTGRGQPEKKPGRQAGKQ
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgcttcccttgtcgctgctgaaaacggctcagaatcacccaatgttggtggagctcaaa
aacggggagacatacaacgggcacctggtgagctgtgacaactggatgaacatcaacctg
cgcgaggtgatctgcacgtccagggacggggacaaattctggcggatgcccgagtgctac
atccgaggcagcaccatcaagtacctgcgcatccccgacgagatcatcgacatggtcaag
gaggaggtggtggccaagggccgtggccgcggtggcctgcagcagcagaagcagcagaag
ggccgcgggatggggggcgccgggcgaggtgtgttcggtggccggggccgaggtgggatc
cccgggactggcagaggtcagccagaaaagaagccaggcaggcaggcgggcaagcagtga
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