Bubalus kerabau (carabao): 129631329
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Entry
129631329 CDS
T11435
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
bke Bubalus kerabau (carabao)
Pathway
bke03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129631329 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bke03019
]
129631329 (CNOT1)
Messenger RNA biogenesis [BR:
bke03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129631329 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
129631329 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129631329
NCBI-ProteinID:
XP_055408253
LinkDB
All DBs
Position
17:complement(29419487..29504902)
Genome browser
AA seq
2396 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPAPHLFAQLSKVLK
LSKVQEVIFGLALLNSSSTDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGVAKTMMESSLADFMQEVGYGFCASIEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLNFKEVTYE
LDHPGFQIRDSKGLHNVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLINPEIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKVYLKKHRVKFIVKALSMLLNGTPFAFVIDLAA
LASRREYLKLDKWLTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPET
LATMLACLQACAGSVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAIS
PVQIDPLAGMASLSIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFS
GIGGLSSQLPVGGLGTGSLTGIGTGALGLPAVNSDPFVQRKLGTSGLNQPTFQQSKMKPS
DLSQVWPEANQHFSKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREV
FNCMLRNLFEEYRFFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFG
SKMYYFGIAALDRFKNRLKDYPQYCQHLASISHFMQFPHHLQEYIEYGQQSRDPPVKMQG
SITTPGSIALAQAQAQAQVPAKAPLAGQVSTMVTTSTTTTVAKTVTVTRPTGVSFKKDVP
PSINTTNIDTLLVATDQTERIVEPPENIQEKIAFIFNNLSQSNMTQKVEELKETVKEEFM
PWVSQYLVMKRVSIEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFS
DRSLLKNLGHWLGMITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSI
RSVVFRPPNPWTMAIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKD
RLKNLDEQLSAPKKDVKQPEELPPITTTTTSTTPATSTTCTATVPPQPQYSYHDINVYSL
AGLAPHITLNPTIPLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKD
FALDSEESRMRIAAHHMMRNLTAGMAMITCREPLLMSISTNLKNSFASALRTASPQQREM
MDQAAAQLAQDNCELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLT
YQAERMPEQIRLKVGGVDPKQLAVYEEFARNVPGFLPTNDLSQPTGFLAQPMKQAWATDD
VAQIYDKCITELEQHLHAIPPTLAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVE
GLLDATSGADADLLLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEA
VELLIRNHLVNMQQYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHT
IETLMRINAHSRGNAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPG
LREKAEYLLREWVNLYHSAAAGRDSTKAFSAFVGQVELLERKMHQQGILKTDDLITRFFR
LCTEMCVEISYRAQAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKI
NLLNKVLGIVVGVLLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFC
NTFHILRPTKAPGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLR
NVELTKPMQILYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNM
RLPDPFTPNLKVDMLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNL
QVSNEPGNRYNLQLINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDT
EGRYLFLNAIANQLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPW
GLLITFIELIKNPAFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7191 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaatcggcacggt
cctgaggcagacaggcatttattacgctgcctattttcgcatgtggatttcagtggcgat
ggtaaaagtagtggcaaagattttcatcagactcagtttctgattcaggagtgtgcgtca
ctgattacgaagccaaattttatctcgacgctgtcctatgccattgataatccattgcac
tatcagaagagtttaaagcctgcaccccacttatttgcccagctgagtaaagttctcaag
ttaagcaaagtacaagaggtaatttttggccttgccctcttgaattcttccagcacagat
ctcagaggttttgctgcccagtttatcaaacagaagcttccagatcttctgcgttcttac
attgacgcagacgtcagtggaaatcaggaaggtggcttccaagatatagcaatagaggtc
ctacacctcctcctgtcccatctcctctttgggcagaagggagcctttggagttggacag
gaacagatagacgcttttcttaagacgctgcgcagagattttccccaggaacgctgtcct
gtggtgcttgcaccacttttataccctgaaaaacgggacattctaatggacagaatcctg
cctgattccggaggggtagctaaaaccatgatggagagctctttggctgattttatgcaa
gaagtgggctatggcttttgtgcaagtattgaagaatgtcgcaatataatcatgcagttt
ggtgttcgggaggtcacagctgcccaggttgcaagggttttaggaatgatggctcgaact
cattcaggattaacagacggaattccattacagagtatctctgctcctggcagtggaatc
tggagtgatgggaaagataaaagtgatggagcacaggcacacacatggaatgtagaagtc
ttgatcgatgttctcaaagaactgaacccgagtttgaatttcaaggaagtaacttatgaa
ctggaccatcctgggtttcaaattcgtgatagtaaaggacttcataatgtagtctatggc
attcagaggggtctgggtatggaagtgttccctgtagatctcatatacagaccttggaaa
catgcagaaggccagctctccttcattcagcattcccttataaatccagagatcttctgt
tttgccgactatccctgtcatactgttgccactgatattctgaaagcaccaccagaggat
gacaatcgagaaattgccacatggaagagcttggatttgattgaatctctgctaaggctc
gcagaggtagggcaatatgagcaagtcaaacagctcttcagcttccctatcaaacactgt
ccagacatgctggtattggccttattacaaatcaacacctcctggcacaccttgcgccac
gaactcatctccactctgatgccaattttccttggaaaccaccctaactcagctataatt
ttgcactatgcatggcatggacagggacagtctccctcaatccgccaacttatcatgcat
gcaatggcagaatggtacatgcgaggggagcagtatgaccaggccaaattgtctcgaata
cttgatgtggcccaggacttgaaggtttatttgaaaaaacacagggtaaagtttattgtg
aaggctttgtcaatgctgctaaatggtactccatttgcctttgttattgaccttgctgca
cttgcttcacgtcgtgaatacctcaaacttgacaagtggctcacagataaaattcgagag
catggagagccttttatccaggcttgtatgacttttttaaagagacggtgtccttctatt
ttggggggacttgccccagagaaagatcagcccaaaagtgctcaacttcctccagaaacc
ctggcgacaatgttggcctgtttacaagcttgtgcagggagtgtttctcaggagttatca
gaaaccatcctcaccatggtggccaattgcagtaacgttatgaacaaggccaggcagcca
ccaccgggagttatgccaaaaggacgccctcctagtgctagcagcttggatgccatttct
cccgttcagattgaccctcttgctggaatggcatctcttagtataggtggttcagctgcc
cctcacacccagagtatgcagggctttcctccaaatttgggttctgcattcagtacccca
cagtcaccagcaaaagcatttccacccctttcaaccccaaatcagacaactgcattcagt
ggtattggaggactttcatcacagcttccagtaggtggtcttggcacaggcagcctgact
ggtataggaactggggctcttggactccctgcagtgaatagcgatccttttgtacagagg
aaactgggcacctctggactgaaccagcctacattccagcagagtaagatgaaaccttcg
gacttgtctcaggtgtggccagaggcaaatcagcactttagtaaagagatagatgatgaa
gcaaacagctatttccagagaatatataatcacccaccacatccaaccatgtctgttgat
gaggtattagaaatgctacagagatttaaagattctaccataaagagggaacgagaagta
tttaactgtatgctaaggaacttgttcgaagaatatcggttctttccccaataccctgat
aaagagttacatataacagcctgcctgtttggtggaataattgaaaaaggactggtcact
tacatggcactaggtttggccctgcgatacgttcttgaagccttacgcaagccttttgga
tccaaaatgtattattttgggattgctgcactagatagatttaaaaatagattgaaggac
tatccccagtattgtcagcacttggcttcgatcagtcactttatgcaatttccacatcat
ttacaggagtatattgagtatggacagcaatctagagatcctcctgtgaaaatgcagggc
tctatcacaacccctggaagtattgcactggctcaagcccaggcccaggcccaggttcca
gcaaaagctccccttgctggccaggttagcactatggtaaccacctcaacaactaccact
gttgctaaaacggttacagtcaccaggccaactggagtcagctttaagaaagatgtgcca
ccttctattaatacaacaaatatagatacattgcttgtggccacagatcaaactgagaga
atcgtagagcccccagaaaatatccaggagaaaattgcttttatcttcaacaacctttcc
cagtcaaatatgacacaaaaggttgaagaactaaaggaaactgtgaaggaagaatttatg
ccttgggtttcacagtacctggttatgaagagagtcagtattgagccaaactttcacagc
ctgtattctaacttccttgacacgctgaagaatcctgagtttaataagatggttctgaat
gagacctatagaaacatcaaagtactcctgacctctgataaagctgcagccaatttctct
gatcggtctttgctgaagaacttgggacattggctaggaatgattacactagctaaaaat
aaacccatcttacacactgacttggatgtaaaatctttgctgctagaggcttatgttaaa
ggacagcaagagttgctctatgtagtgccctttgttgccaaagtcttagaatctagcatt
cgtagtgtggtttttaggccacccaacccctggacaatggctattatgaatgtattagct
gagctacatcaagaacatgacttaaagttaaacttgaagtttgaaattgaggtcctctgt
aagaatcttgcattagacatcaatgagctaaaacctggaaacctcctaaaggataaagat
cgcctgaagaacttagatgagcaactctctgctccaaagaaagatgtcaagcagccagag
gagctccctcctatcacaaccacaacaacttctacaacaccagctaccagcaccacctgt
acagccaccgttccaccacagccacagtacagttaccatgacatcaatgtctattccctc
gcaggcctggcaccacacattactctaaacccaacaattcccttgtttcaggcccatcca
cagctgaagcagtgtgtgcgccaagcaattgaacgggccgtccaggagctggtccatcct
gtggtggatcgatcaattaagattgccatgactacttgtgagcaaatagtcaggaaagat
tttgccctggattctgaggaatctcgaatgcgaatagcagctcatcacatgatgcggaac
ttgacagctggaatggccatgattacttgcagggaacctttactcatgagcatatcaacc
aacctgaaaaacagttttgcctcagcccttcgtactgcaagcccacaacaaagggaaatg
atggatcaggcagctgctcaattagctcaggacaattgtgaattagcttgctgttttatt
cagaagactgcagtagaaaaagcaggccctgagatggacaagagattagcaactgaattt
gagctgagaaaacatgctaggcaagaagggcgaaggtattgtgatcctgttgtgttaaca
taccaagctgagcggatgccagagcaaatcaggctgaaagttggtggtgtggacccaaag
cagctggctgtttatgaagagtttgcacgcaatgtgcctggcttcttgcctacaaatgat
ttaagtcagcccacaggatttttagcccagcccatgaagcaagcttgggcaacagatgat
gtagctcagatttatgataagtgtattacagaactggagcagcatcttcacgctatcccg
ccaactttggccatgaacccccaagctcaggcccttagaagtcttctggaggttgtagta
ttatcacggaactctcgagatgccattgctgctcttggattgctccagaaggctgtagag
ggcttactggatgccaccagtggtgctgatgctgacctcctccttcgctacagagagtgc
cacctcttggtcttgaaagctcttcaagatggccgggcatatgggtctccatggtgtaac
aaacagatcacaaggtgcctaattgaatgtcgggatgaatacaaatataatgtggaggca
gtggagttgctaattcgcaatcatttggtcaatatgcaacagtatgatcttcaccttgct
cagtcaatggagaatggtttaaactacatggctgtggcatttgctatgcaattggtaaaa
atactgctggtggatgaaagaagtgttgcccatgttactgaggcagatctgttccacacc
attgaaaccctcatgaggattaatgctcactccagaggcaatgctcctgaaggattgccc
caactgatggaagtagtgcgatccaactatgaagcaatgattgatcgtgctcatggaggc
cctaactttatgatgcattctgggatctctcaagcctcagagtatgatgatcctccaggc
ctgagggagaaggcagagtatcttctgagggaatgggtgaatctctaccattcagcagca
gctggtcgtgacagtaccaaagctttctctgcgtttgttggacaggtagagcttttggaa
agaaagatgcaccagcaaggaatcctgaagactgatgacctcataacaaggttctttcgt
ctgtgtactgaaatgtgtgttgaaatcagttaccgtgctcaggcagagcagcagcacaat
cctgctgctaatcccaccatgatccgagccaagtgctatcacaacctggatgcctttgtc
cgactcattgcactgctagtaaagcactcaggggaggccaccaacactgtcacaaagatt
aatctgctgaataaggtcctcggtatagtagtgggagttctcctacaggatcatgatgtt
cggcaaagtgaatttcagcaacttccctaccaccgaatttttatcatgctgctcttggaa
ctcaatgcacctgagcatgtgttggaaaccattaatttccagacacttacagctttctgc
aacacattccacattttgaggcctaccaaagctcctggctttgtgtatgcttggcttgaa
ctgatctcccatcggatatttattgcaagaatgctggcacacacaccacagcagaaggga
tggcctatgtatgcacagttactgattgatttattcaaatatttagcgcctttccttaga
aatgtggaactcaccaaacctatgcaaatcctctacaagggcactttaagggtgctgctg
gttcttttgcatgattttcccgagttcctttgtgattatcattatggattttgtgacgtg
atcccacctaattgtatccagctaagaaatctgatcctgagtgccttcccaagaaacatg
aggctcccagacccattcactcctaatctgaaggtggatatgttgagtgaaattaacatc
gctccccggattctcaccaattttactggagtgatgccacctcaattcaaaaaggatttg
gattcctatcttaaaactcgatcacccgtcactttcctatctgatctgcgcagcaaccta
caggtatccaatgagcctggtaatcgctacaacctccagctcattaatgcactggtgctc
tatgtagggactcaggccattgcacacatccacaacaagggcagcacaccttcaatgagc
accatcacgcactcagctcacatggacatcttccagaacctggctgtggatttggacact
gaaggtcggtatctcttcttgaatgcaattgcaaatcagctgcggtacccaaatagccac
actcactacttcagctgcaccatgctgtacctttttgcagaggccaacactgaagctatt
caagaacagatcacaagggttcttttggaacggttgattgtaaataggccacatccttgg
ggtcttcttattaccttcattgagctgattaaaaatccagcatttaaattctggaaccat
gaatttgtacactgtgccccagaaattgaaaagttattccagtccgtcgcacagtgctgc
atgggacaaaagcaggctcagcaagtaatggaagggacaggtgccagttag
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integrated database retrieval system
