Bubalus kerabau (carabao): 129636245
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Entry
129636245 CDS
T11435
Symbol
SS18
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
bke Bubalus kerabau (carabao)
Pathway
bke03082
ATP-dependent chromatin remodeling
bke05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129636245 (SS18)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
129636245 (SS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bke03036
]
129636245 (SS18)
Chromosome and associated proteins [BR:
bke03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
129636245 (SS18)
GBAF(ncBAF) complex
129636245 (SS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129636245
NCBI-ProteinID:
XP_055415597
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Position
21:33791153..33866634
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AA seq
419 aa
AA seq
DB search
MLSGVQVCKPWDNRAPGSSVRGILQMLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNL
VYLATIADSNQNMQSLLPAPPTQNMPMGPGGMSPSGPPPPPRTHNMPSDGMVGGGPPAPH
MQNQMNGQMPGPNHIPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYSHSVPSSQSMPVQNQ
MTMSQGQPMGNYGPRPNMSMQPNQGPVMHQQPPSQQYSMPQGGGQHYQGQQPPMGMMSQV
NQGNHMLGQRQIPPYRPPQQGPPQQYSGQEDYYGEQYSHGGQGPPEGMNQQYYPDGHNDY
GYQQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQYPGQQGYP
GQQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPAQPGPPQPPQQRPYGYDQGQYGNYQQ
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgctcagtggcgtccaagtttgcaagccctgggacaacagagcaccaggctcctctgtc
cgtggaattttgcagatgctggatgaaaataaccatcttattcagtgtataatggactat
cagaataaaggaaagacctcagagtgttctcagtatcaacagatgttgcataccaacttg
gtctaccttgctacaatagcagattctaatcagaacatgcagtctctcttaccagcacca
cccacacagaatatgcctatgggtcccggagggatgagtccgagcggccctcccccacct
ccgcgcactcacaacatgccttcagatggaatggtaggtgggggtcctccggcaccacac
atgcagaaccagatgaacggccagatgcctgggcccaaccatatccctatgcagggacct
ggacccaatcaacttaatatgacaaacagttccatgaacatgccttcaagtagccacggg
tccatgggaggttacagccattccgtgccgtcatcccagagcatgccggtacagaaccag
atgaccatgagtcaagggcagcccatgggaaactacggccccagaccaaatatgagcatg
cagccaaaccaaggtccagtgatgcaccagcagcctccttctcaacagtacagcatgccc
cagggaggtgggcagcattaccaaggccagcagccaccaatgggaatgatgagtcaagtt
aaccaaggcaatcatatgctgggtcagaggcagatccccccgtatagaccacctcaacag
ggcccaccacagcagtactcaggccaggaggactattatggggagcaatacagtcatggt
ggacaaggtcctccagaaggcatgaaccagcagtattaccctgatggtcataatgattac
ggttatcagcaaccgtcgtatcctgaacaaggctacgataggccttatgaggattcctca
caacattactacgaaggaggaaattcgcagtatggccaacagcaagatgcctaccaagga
ccacctccccagcagggctacccaccccagcagcagtacccagggcagcagggctaccca
ggacagcagcagggctacggtccttcacagggtggcccaggtcctcagtatcctaactac
ccacagggacaaggtcagcagtatgggggttacagaccggcacagcctggacccccacag
ccaccgcagcagaggccttatgggtacgaccaggggcagtatggaaactaccagcagtga
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